| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is iorA [H]
Identifier: 120598400
GI number: 120598400
Start: 1806120
End: 1806623
Strand: Direct
Name: iorA [H]
Synonym: Sputw3181_1583
Alternate gene names: 120598400
Gene position: 1806120-1806623 (Clockwise)
Preceding gene: 120598399
Following gene: 120598401
Centisome position: 38.36
GC content: 49.01
Gene sequence:
>504_bases ATGGCAGAAGTATTATCAACCACTGCAATTATCAAGGAAGCCAGTACCGCCGCTTCCACCCAAACACTTTCTATTAACGG TAAATCATTTACTTTAGATGCCGATCCTAAGATGCCAATTCTGTGGGCACTACGGGATATTTTAGGGTTAACAGGCACTA AATATGGCTGCGGAGCAGGGCTATGTGGTGCTTGCACTGTGCATTTAGACGGCCAACCCGTTCGAGCTTGCTTAACCAGC CTAGGGCAAGCTCAAGGTAAACAACTAACAACGATTGAAGGGCTTGATAATCAAAAGCTTAAAAATGCTTGGGCCGAACA TAACGTGCCCCAGTGCGGCTATTGTCAGGCGGGACAATTGATGTCGGCTGCGGCGTTAGTGGCGCAGCATCCTAAACCTA CAGAGGAACAAATCAACTCAGCCATGTCGGGTAATCTCTGCCGCTGTGGCACCTACCCACGCATTAAAGCGGCGCTGCAA CACTATGCCAAACAGGAGGGCTAA
Upstream 100 bases:
>100_bases ACAGCGGGGAGCGTTAGTCGCTATAACACTACCCCGCGCCGCAATTGATATTGATACCCAAGCCGATCTTGCGTCGTGGT TGGCACTTAAGGAGTGAGTT
Downstream 100 bases:
>100_bases TATGAGTACTTTTACTGCCGTAGAAAATTTAAGCCGCCGCGACGTGTTAAAACTGTTTGGCGCAGTAGGGGGCGGACTTG CATTAGGGGCGAGTGGACTA
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MAEVLSTTAIIKEASTAASTQTLSINGKSFTLDADPKMPILWALRDILGLTGTKYGCGAGLCGACTVHLDGQPVRACLTS LGQAQGKQLTTIEGLDNQKLKNAWAEHNVPQCGYCQAGQLMSAAALVAQHPKPTEEQINSAMSGNLCRCGTYPRIKAALQ HYAKQEG
Sequences:
>Translated_167_residues MAEVLSTTAIIKEASTAASTQTLSINGKSFTLDADPKMPILWALRDILGLTGTKYGCGAGLCGACTVHLDGQPVRACLTS LGQAQGKQLTTIEGLDNQKLKNAWAEHNVPQCGYCQAGQLMSAAALVAQHPKPTEEQINSAMSGNLCRCGTYPRIKAALQ HYAKQEG >Mature_166_residues AEVLSTTAIIKEASTAASTQTLSINGKSFTLDADPKMPILWALRDILGLTGTKYGCGAGLCGACTVHLDGQPVRACLTSL GQAQGKQLTTIEGLDNQKLKNAWAEHNVPQCGYCQAGQLMSAAALVAQHPKPTEEQINSAMSGNLCRCGTYPRIKAALQH YAKQEG
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=156, Percent_Identity=37.1794871794872, Blast_Score=73, Evalue=1e-13, Organism=Homo sapiens, GI71773480, Length=107, Percent_Identity=32.7102803738318, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1786480, Length=163, Percent_Identity=40.4907975460123, Blast_Score=116, Evalue=8e-28, Organism=Escherichia coli, GI1789232, Length=138, Percent_Identity=39.1304347826087, Blast_Score=90, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17539860, Length=155, Percent_Identity=38.0645161290323, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI32566215, Length=160, Percent_Identity=37.5, Blast_Score=103, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17540638, Length=168, Percent_Identity=36.3095238095238, Blast_Score=103, Evalue=6e-23, Organism=Drosophila melanogaster, GI17737937, Length=157, Percent_Identity=36.3057324840764, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI24647197, Length=160, Percent_Identity=32.5, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24647193, Length=160, Percent_Identity=35, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24647201, Length=155, Percent_Identity=32.9032258064516, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI24647195, Length=160, Percent_Identity=32.5, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI24647199, Length=157, Percent_Identity=33.1210191082803, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 17618; Mature: 17487
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVLSTTAIIKEASTAASTQTLSINGKSFTLDADPKMPILWALRDILGLTGTKYGCGAG CCHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC LCGACTVHLDGQPVRACLTSLGQAQGKQLTTIEGLDNQKLKNAWAEHNVPQCGYCQAGQL CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHH MSAAALVAQHPKPTEEQINSAMSGNLCRCGTYPRIKAALQHYAKQEG HHHHHHHHCCCCCCHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure AEVLSTTAIIKEASTAASTQTLSINGKSFTLDADPKMPILWALRDILGLTGTKYGCGAG CHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC LCGACTVHLDGQPVRACLTSLGQAQGKQLTTIEGLDNQKLKNAWAEHNVPQCGYCQAGQL CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHH MSAAALVAQHPKPTEEQINSAMSGNLCRCGTYPRIKAALQHYAKQEG HHHHHHHHCCCCCCHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]