| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
Click here to switch to the map view.
The map label for this gene is 120598399
Identifier: 120598399
GI number: 120598399
Start: 1805451
End: 1806116
Strand: Direct
Name: 120598399
Synonym: Sputw3181_1582
Alternate gene names: NA
Gene position: 1805451-1806116 (Clockwise)
Preceding gene: 120598398
Following gene: 120598400
Centisome position: 38.35
GC content: 46.85
Gene sequence:
>666_bases GTGAGGTTACTGGATAAACGGCTTCTTATCGTGGTCCTTGCGGCAGGTGAAAGTCAGCGTTTTGAAGGGGTTAAGTTAGC GCAGCTTCTACCATCACATAGTGCGACTGAAACTTGCGAACAAACCATCATTAACACTCATGTTGCGCGTTTACAGCAGC TTAATTGCCAAGATTTAGGTTTGGATCGCCAAGCGCATTTGTTAATCATACTCGGTGCTCATCGGCATATATTGCAGCCA TTGTTAGCCGAGCTTAAATCTCACCAACCCTTTGATATTTTAGTTAATCCGCAGTGGCAAATGGGCCTAGCATCCTCAGT GAGTTTGGCGGCAAGTTATGCCAAGGAGCAAGGCTTTGATGCCATGCTGTTGACTCTCGCGGACCAAGTGGCCTTGAGTG TTGATGATTATCGACAACTGATTTTGACATGGCTTAAAACCGGCAAAGATGTTGCCGCCCATTATTTGGATGATGTAGGC GTACCTGCTATTTTTAATGCCTCTACATTACCGCTGTTCACTCACTTGAGTGGCGATCGCGGGGCTAAATCTATTTTAAA ACAACAAGCACAGCGGGGAGCGTTAGTCGCTATAACACTACCCCGCGCCGCAATTGATATTGATACCCAAGCCGATCTTG CGTCGTGGTTGGCACTTAAGGAGTGA
Upstream 100 bases:
>100_bases TACCGAGCGCCATTGCTTTAAGTATTTTAGCTCAATGTCACGGTGTGCTACATGGAGCAACACTGAAACAACTTGATGAG ATTATGGGTTAATGACACCT
Downstream 100 bases:
>100_bases GTTATGGCAGAAGTATTATCAACCACTGCAATTATCAAGGAAGCCAGTACCGCCGCTTCCACCCAAACACTTTCTATTAA CGGTAAATCATTTACTTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MRLLDKRLLIVVLAAGESQRFEGVKLAQLLPSHSATETCEQTIINTHVARLQQLNCQDLGLDRQAHLLIILGAHRHILQP LLAELKSHQPFDILVNPQWQMGLASSVSLAASYAKEQGFDAMLLTLADQVALSVDDYRQLILTWLKTGKDVAAHYLDDVG VPAIFNASTLPLFTHLSGDRGAKSILKQQAQRGALVAITLPRAAIDIDTQADLASWLALKE
Sequences:
>Translated_221_residues MRLLDKRLLIVVLAAGESQRFEGVKLAQLLPSHSATETCEQTIINTHVARLQQLNCQDLGLDRQAHLLIILGAHRHILQP LLAELKSHQPFDILVNPQWQMGLASSVSLAASYAKEQGFDAMLLTLADQVALSVDDYRQLILTWLKTGKDVAAHYLDDVG VPAIFNASTLPLFTHLSGDRGAKSILKQQAQRGALVAITLPRAAIDIDTQADLASWLALKE >Mature_221_residues MRLLDKRLLIVVLAAGESQRFEGVKLAQLLPSHSATETCEQTIINTHVARLQQLNCQDLGLDRQAHLLIILGAHRHILQP LLAELKSHQPFDILVNPQWQMGLASSVSLAASYAKEQGFDAMLLTLADQVALSVDDYRQLILTWLKTGKDVAAHYLDDVG VPAIFNASTLPLFTHLSGDRGAKSILKQQAQRGALVAITLPRAAIDIDTQADLASWLALKE
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24223; Mature: 24223
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLDKRLLIVVLAAGESQRFEGVKLAQLLPSHSATETCEQTIINTHVARLQQLNCQDLG CCCHHCEEEEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCC LDRQAHLLIILGAHRHILQPLLAELKSHQPFDILVNPQWQMGLASSVSLAASYAKEQGFD CCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCH AMLLTLADQVALSVDDYRQLILTWLKTGKDVAAHYLDDVGVPAIFNASTLPLFTHLSGDR HHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCEEEECCCCC GAKSILKQQAQRGALVAITLPRAAIDIDTQADLASWLALKE HHHHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHCCC >Mature Secondary Structure MRLLDKRLLIVVLAAGESQRFEGVKLAQLLPSHSATETCEQTIINTHVARLQQLNCQDLG CCCHHCEEEEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCC LDRQAHLLIILGAHRHILQPLLAELKSHQPFDILVNPQWQMGLASSVSLAASYAKEQGFD CCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCH AMLLTLADQVALSVDDYRQLILTWLKTGKDVAAHYLDDVGVPAIFNASTLPLFTHLSGDR HHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEECCCCCCEEEECCCCC GAKSILKQQAQRGALVAITLPRAAIDIDTQADLASWLALKE HHHHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA