| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
Click here to switch to the map view.
The map label for this gene is iorB [H]
Identifier: 120598401
GI number: 120598401
Start: 1806625
End: 1808871
Strand: Direct
Name: iorB [H]
Synonym: Sputw3181_1584
Alternate gene names: 120598401
Gene position: 1806625-1808871 (Clockwise)
Preceding gene: 120598400
Following gene: 120598402
Centisome position: 38.37
GC content: 50.42
Gene sequence:
>2247_bases ATGAGTACTTTTACTGCCGTAGAAAATTTAAGCCGCCGCGACGTGTTAAAACTGTTTGGCGCAGTAGGGGGCGGACTTGC ATTAGGGGCGAGTGGACTAACTTGGAGCCCCATGGCGCTGGCACAGAATAAAGAAGCGCGGCTGAATCTATTTATTGCCA TAGGTGAGGATAACAAAGTGTACCTCACTTGCCATCGCTCCGAGATGGGACAGGGGATCAGAACGGGTATTCTGCAAGTC TTAGCCGAAGAGTTAGAAGCGGATTGGGATAAAATCGTCCCAGTACAGGGGCTAGGCGATAAGCGTTATGGCAGCCAGAA TACCGATGGTAGCCGCAGTATTCGCGATAATTTTGATCGTATGCGCCAGATGGGGGCGATGGCAAGAACCATGCTAGAGC AAGCCGCAGCCGCGCGCTGGAAAGTCCCCGTGAGCGAGGTGCATACCGCCAGCCATAAAGTGCTGCATGCTAAAACGGGC CGCTCGGCCAAGTTTGGCGAGTTAGCGTTAGCGGCATCAGCGCTGCCAGTACCTGCCGTTGAGTCATTAACCTTTAAAGA GATTAAAGATTTCAAGCAGATTGGCGCATCCCGCCAAATCGTTGATATGGATGCCATGTTAAGCGGTAGCGCAATTTATG GTTACGATATCAAACTCGACGGCATGCTCTACGCCAGCATCATGCGTCCGCCCGTGCTTGGGAGCGATGTTGCAAGTTTG GATGATACCGCAGCGCGCAACGTGGCCGGAGTCGTGGATGTGTATCGTTTGCCTATCCCTAAGGGCGCCCCCGGGTTTCA GGCTTTGGGCGGTGTGGCGGTTATCGCTACCAACACTTGGAGTGCCTTTGAAGGCCGTAAAGCATTAAATATCACTTGGA CTCAGGTCGACAACAGTCAGCACGATTCGACACTTTATTTAAAGGCGTTAGTCGAGCGAGTACAGCAAGGCGGTAAAGTG GTGCGTCAAGTTGGTGATGAGGTCAAAAATTGGCCCGAAGCGAATACATTAAAGGCGGTTTATACCGTGCCCTACTTAAT TCATTCACCAATGGAACCGCCAGTTGCAACGGCCAATGTGACGGCAAAGGAATGTGAAGTTTGGGCTTCAACTCAAAACC CACAAAGCACTCAACAAAGCGTGGCCGCAGCACTGGGGATTGAAGAGGATACCGTAAAAGTTCACGTCACATTATTAGGT GGTGGATTTGGACGAAAAGCAAAGCCTGATTTTAGTGTCGAAGCCGCGTTGTTATCAAAGCAGTTTAAGCGTCCAATTAA GGTGAGTTGGAGCCGCGAGGATGAAATCCAAAACGGTTATTACCATGCTATCAGCGCCCAGTCCTATCAGGCGCTGTTCG ATGCTAACAATAAACCGACTGCGCTTTTAGCTCGGACTGGATTCCCATCGATCAGTTCAACCTTTGCCGAAGGCGTCGAA TATCCCTCTGACGGTGAGTTAGATTTAGGTTTTGTGGACGTACCCTTTGCTTTGCCGCACTTAAGATACGAAGCGGTAAA AGCGCAGGCGCATAGCCGCATAGGTTGGATGCGCTCTGTGTGTAATATTCAGCATGGCTTTAGTGTCGGTAGCTTTGTCG ATGAAATGGCTCACAGAGCTCAGATGTCTTGTCCCGATATGTGGCGCAGCTTACTTGGGCAATCAAGGCGTGAGACCTTT GATAACCAAGGCTTTAAATATGGTAACTACGGTGAAGACTTAAATCGCCATCCGGTGGATATAGATCGTTATTTAAACGT CATTAATGCCGTCGAACAGGCTCAAGCCAAGGCGCCTAAGGCGGGCAAACATCAGGGCTGGGGTTTTGCCGTGCACCGCA GTTTTGTGAGTGTGGTCGCTGTGGCCATGCGGGTGGAAGTGAGTGAGGATAAACAGCTTAAGGTACTTAATGCCATCGCT GCCATTGATGCGGGAACGGTGGTGAATCCTGATAGAGTGAAATCACAAACCGAAGGCGCAATTATCTTTGGTCTAAGCTT GGCCTTGATGGGTGAAATCACATACAAAGAAGGCCAAGTGCTTCAATCAAATTTCCACGATTATCCTTTGCTGCGACTCC CTCAAACTCCTGATATGGAGATTATCATTATCGAGTCCGATGCTGCGCCTGCAGGCGTGGGGGAGCCGGGTGTGCCGCCC GTTGCTCCGAGTTTGACCAATGCAATTTTTGCGGCGACAGGACAGAGGATCCGCGATCTTCCCGTGAATAAGCGATTGCG AGTTTAA
Upstream 100 bases:
>100_bases GAACAAATCAACTCAGCCATGTCGGGTAATCTCTGCCGCTGTGGCACCTACCCACGCATTAAAGCGGCGCTGCAACACTA TGCCAAACAGGAGGGCTAAT
Downstream 100 bases:
>100_bases GCCAATGCTAAAGGGTTAACGGAAAGTGATTTGAATAAAAAAGCGCCTAATGAGCGCTTTTTTCGTTTTTTTACCACAAA AAAATTGCTTGTTAGCGATT
Product: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 748; Mature: 747
Protein sequence:
>748_residues MSTFTAVENLSRRDVLKLFGAVGGGLALGASGLTWSPMALAQNKEARLNLFIAIGEDNKVYLTCHRSEMGQGIRTGILQV LAEELEADWDKIVPVQGLGDKRYGSQNTDGSRSIRDNFDRMRQMGAMARTMLEQAAAARWKVPVSEVHTASHKVLHAKTG RSAKFGELALAASALPVPAVESLTFKEIKDFKQIGASRQIVDMDAMLSGSAIYGYDIKLDGMLYASIMRPPVLGSDVASL DDTAARNVAGVVDVYRLPIPKGAPGFQALGGVAVIATNTWSAFEGRKALNITWTQVDNSQHDSTLYLKALVERVQQGGKV VRQVGDEVKNWPEANTLKAVYTVPYLIHSPMEPPVATANVTAKECEVWASTQNPQSTQQSVAAALGIEEDTVKVHVTLLG GGFGRKAKPDFSVEAALLSKQFKRPIKVSWSREDEIQNGYYHAISAQSYQALFDANNKPTALLARTGFPSISSTFAEGVE YPSDGELDLGFVDVPFALPHLRYEAVKAQAHSRIGWMRSVCNIQHGFSVGSFVDEMAHRAQMSCPDMWRSLLGQSRRETF DNQGFKYGNYGEDLNRHPVDIDRYLNVINAVEQAQAKAPKAGKHQGWGFAVHRSFVSVVAVAMRVEVSEDKQLKVLNAIA AIDAGTVVNPDRVKSQTEGAIIFGLSLALMGEITYKEGQVLQSNFHDYPLLRLPQTPDMEIIIIESDAAPAGVGEPGVPP VAPSLTNAIFAATGQRIRDLPVNKRLRV
Sequences:
>Translated_748_residues MSTFTAVENLSRRDVLKLFGAVGGGLALGASGLTWSPMALAQNKEARLNLFIAIGEDNKVYLTCHRSEMGQGIRTGILQV LAEELEADWDKIVPVQGLGDKRYGSQNTDGSRSIRDNFDRMRQMGAMARTMLEQAAAARWKVPVSEVHTASHKVLHAKTG RSAKFGELALAASALPVPAVESLTFKEIKDFKQIGASRQIVDMDAMLSGSAIYGYDIKLDGMLYASIMRPPVLGSDVASL DDTAARNVAGVVDVYRLPIPKGAPGFQALGGVAVIATNTWSAFEGRKALNITWTQVDNSQHDSTLYLKALVERVQQGGKV VRQVGDEVKNWPEANTLKAVYTVPYLIHSPMEPPVATANVTAKECEVWASTQNPQSTQQSVAAALGIEEDTVKVHVTLLG GGFGRKAKPDFSVEAALLSKQFKRPIKVSWSREDEIQNGYYHAISAQSYQALFDANNKPTALLARTGFPSISSTFAEGVE YPSDGELDLGFVDVPFALPHLRYEAVKAQAHSRIGWMRSVCNIQHGFSVGSFVDEMAHRAQMSCPDMWRSLLGQSRRETF DNQGFKYGNYGEDLNRHPVDIDRYLNVINAVEQAQAKAPKAGKHQGWGFAVHRSFVSVVAVAMRVEVSEDKQLKVLNAIA AIDAGTVVNPDRVKSQTEGAIIFGLSLALMGEITYKEGQVLQSNFHDYPLLRLPQTPDMEIIIIESDAAPAGVGEPGVPP VAPSLTNAIFAATGQRIRDLPVNKRLRV >Mature_747_residues STFTAVENLSRRDVLKLFGAVGGGLALGASGLTWSPMALAQNKEARLNLFIAIGEDNKVYLTCHRSEMGQGIRTGILQVL AEELEADWDKIVPVQGLGDKRYGSQNTDGSRSIRDNFDRMRQMGAMARTMLEQAAAARWKVPVSEVHTASHKVLHAKTGR SAKFGELALAASALPVPAVESLTFKEIKDFKQIGASRQIVDMDAMLSGSAIYGYDIKLDGMLYASIMRPPVLGSDVASLD DTAARNVAGVVDVYRLPIPKGAPGFQALGGVAVIATNTWSAFEGRKALNITWTQVDNSQHDSTLYLKALVERVQQGGKVV RQVGDEVKNWPEANTLKAVYTVPYLIHSPMEPPVATANVTAKECEVWASTQNPQSTQQSVAAALGIEEDTVKVHVTLLGG GFGRKAKPDFSVEAALLSKQFKRPIKVSWSREDEIQNGYYHAISAQSYQALFDANNKPTALLARTGFPSISSTFAEGVEY PSDGELDLGFVDVPFALPHLRYEAVKAQAHSRIGWMRSVCNIQHGFSVGSFVDEMAHRAQMSCPDMWRSLLGQSRRETFD NQGFKYGNYGEDLNRHPVDIDRYLNVINAVEQAQAKAPKAGKHQGWGFAVHRSFVSVVAVAMRVEVSEDKQLKVLNAIAA IDAGTVVNPDRVKSQTEGAIIFGLSLALMGEITYKEGQVLQSNFHDYPLLRLPQTPDMEIIIIESDAAPAGVGEPGVPPV APSLTNAIFAATGQRIRDLPVNKRLRV
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 81402; Mature: 81270
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFTAVENLSRRDVLKLFGAVGGGLALGASGLTWSPMALAQNKEARLNLFIAIGEDNKV CCCHHHHHHCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCEE YLTCHRSEMGQGIRTGILQVLAEELEADWDKIVPVQGLGDKRYGSQNTDGSRSIRDNFDR EEEEECHHHCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH MRQMGAMARTMLEQAAAARWKVPVSEVHTASHKVLHAKTGRSAKFGELALAASALPVPAV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCHHHHHHCCCCCCCH ESLTFKEIKDFKQIGASRQIVDMDAMLSGSAIYGYDIKLDGMLYASIMRPPVLGSDVASL HHHHHHHHHHHHHCCCCCEEEEHHHHHCCCEEEEEEEEECCCHHHHHHCCCCCCCCHHHC DDTAARNVAGVVDVYRLPIPKGAPGFQALGGVAVIATNTWSAFEGRKALNITWTQVDNSQ CHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEEEECCCCHHCCCEEEEEEEEECCCCC HDSTLYLKALVERVQQGGKVVRQVGDEVKNWPEANTLKAVYTVPYLIHSPMEPPVATANV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCC TAKECEVWASTQNPQSTQQSVAAALGIEEDTVKVHVTLLGGGFGRKAKPDFSVEAALLSK CHHHHHEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHH QFKRPIKVSWSREDEIQNGYYHAISAQSYQALFDANNKPTALLARTGFPSISSTFAEGVE HHCCCEEEECCCCHHHCCCEEEEECCCHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCC YPSDGELDLGFVDVPFALPHLRYEAVKAQAHSRIGWMRSVCNIQHGFSVGSFVDEMAHRA CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QMSCPDMWRSLLGQSRRETFDNQGFKYGNYGEDLNRHPVDIDRYLNVINAVEQAQAKAPK CCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC AGKHQGWGFAVHRSFVSVVAVAMRVEVSEDKQLKVLNAIAAIDAGTVVNPDRVKSQTEGA CCCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCE IIFGLSLALMGEITYKEGQVLQSNFHDYPLLRLPQTPDMEIIIIESDAAPAGVGEPGVPP EEEEEHHHHHHHEECCCCHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCC VAPSLTNAIFAATGQRIRDLPVNKRLRV CCHHHHHHHHHHCCCHHHCCCCCCCCCC >Mature Secondary Structure STFTAVENLSRRDVLKLFGAVGGGLALGASGLTWSPMALAQNKEARLNLFIAIGEDNKV CCHHHHHHCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCEE YLTCHRSEMGQGIRTGILQVLAEELEADWDKIVPVQGLGDKRYGSQNTDGSRSIRDNFDR EEEEECHHHCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH MRQMGAMARTMLEQAAAARWKVPVSEVHTASHKVLHAKTGRSAKFGELALAASALPVPAV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCHHHHHHCCCCCCCH ESLTFKEIKDFKQIGASRQIVDMDAMLSGSAIYGYDIKLDGMLYASIMRPPVLGSDVASL HHHHHHHHHHHHHCCCCCEEEEHHHHHCCCEEEEEEEEECCCHHHHHHCCCCCCCCHHHC DDTAARNVAGVVDVYRLPIPKGAPGFQALGGVAVIATNTWSAFEGRKALNITWTQVDNSQ CHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCEEEEEECCCCHHCCCEEEEEEEEECCCCC HDSTLYLKALVERVQQGGKVVRQVGDEVKNWPEANTLKAVYTVPYLIHSPMEPPVATANV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCC TAKECEVWASTQNPQSTQQSVAAALGIEEDTVKVHVTLLGGGFGRKAKPDFSVEAALLSK CHHHHHEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHH QFKRPIKVSWSREDEIQNGYYHAISAQSYQALFDANNKPTALLARTGFPSISSTFAEGVE HHCCCEEEECCCCHHHCCCEEEEECCCHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCC YPSDGELDLGFVDVPFALPHLRYEAVKAQAHSRIGWMRSVCNIQHGFSVGSFVDEMAHRA CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QMSCPDMWRSLLGQSRRETFDNQGFKYGNYGEDLNRHPVDIDRYLNVINAVEQAQAKAPK CCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC AGKHQGWGFAVHRSFVSVVAVAMRVEVSEDKQLKVLNAIAAIDAGTVVNPDRVKSQTEGA CCCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCE IIFGLSLALMGEITYKEGQVLQSNFHDYPLLRLPQTPDMEIIIIESDAAPAGVGEPGVPP EEEEEHHHHHHHEECCCCHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCC VAPSLTNAIFAATGQRIRDLPVNKRLRV CCHHHHHHHHHHCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]