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The map label for this gene is yibD [C]

Identifier: 120598293

GI number: 120598293

Start: 1661412

End: 1662359

Strand: Direct

Name: yibD [C]

Synonym: Sputw3181_1471

Alternate gene names: 120598293

Gene position: 1661412-1662359 (Clockwise)

Preceding gene: 120598292

Following gene: 120598295

Centisome position: 35.29

GC content: 31.12

Gene sequence:

>948_bases
ATGAATAATTCAATGGTCACTGTTTGTATTGTTACGTATAACCAAAAGAAGTATATAGAGCAATGCTTAGATAGCATAGT
TAATCAAAAAACAGACTATTCATATCAAGTCATTATCTCGGATGATGCATCTACCGATGGCACCTCTGAGATATGCGCTG
AATATGCAAAAAGATATCAATTTATTAATCATATAAGACATGCAACAAATATAGGAGCGTACGAAAACTTTAAATATGTT
CATCGTCAAGCAAAAACACAATATGTCTCACATTGTGATGCTGATGATTCCTGGCATGAAGATAAATTAGAAAAACAAAT
TAAGTTTTTAGAAGGCAATAGTGATTGCTGTGCTGTATATAGTAATGCTATTGTTATAAATGAACATGGCACACGAATTG
GAGTTTTTAATAATTCAGAGGAAATACCTTCAAAAATCACCATAGGTTATTTGTTAGAAAAGTCTAATTTCTTAAACAAT
AGTTCTATGATTTATCGTCGTGATATGATTGGTGATATTTTCGATGCCGATGGGAAGGTTGTTGATTATCGTATTCATAT
ACATTTAGCTAATTGTGGTCTATTGGGCTATATCAAAGAGTCATTAGCATTTTACCGCAAAGGAGCCGCTGGTGGTTTAT
GCCTAAACGCGCCTGCTGCTGTTGGACAATTAGTTCATGAAGCAAGACTTGATGGTATAAAAAATGCCAAATTGAGCATA
GTTGATTTTTCAAAAATTAAAACTAACGCCTGGTATGGTAAATTAACTTGTTTTTTGAAAAGAAATAAATTTATGTATGC
ACGACATACTGAAGTAGAAGCACTCATTGTAGATTATGACTTTATCCAATCAGTAATGTTTTTGTTTTTTGAAATTGTGA
TTTATTTTTTCTGTAAAATGAAAGAAAAATTATCCATCAATAAAAATATTATTTTGTATCATAGATGA

Upstream 100 bases:

>100_bases
TGGTGGAATCTACCAAAAAACAAAATTGTGTTGATAGCAAAATATCTAACATCACAGGATGTAAATGAGTGCATAAAACA
AATAAAAATGGTGAAAGATA

Downstream 100 bases:

>100_bases
TTTTAAGCATTAATCAATCAGCAGCTACAAATATCATAACACATCTATTAAATGAAGTTTTCTGTTGATATCATTATAAA
TAATTTGCATAAGTGTTAAC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNNSMVTVCIVTYNQKKYIEQCLDSIVNQKTDYSYQVIISDDASTDGTSEICAEYAKRYQFINHIRHATNIGAYENFKYV
HRQAKTQYVSHCDADDSWHEDKLEKQIKFLEGNSDCCAVYSNAIVINEHGTRIGVFNNSEEIPSKITIGYLLEKSNFLNN
SSMIYRRDMIGDIFDADGKVVDYRIHIHLANCGLLGYIKESLAFYRKGAAGGLCLNAPAAVGQLVHEARLDGIKNAKLSI
VDFSKIKTNAWYGKLTCFLKRNKFMYARHTEVEALIVDYDFIQSVMFLFFEIVIYFFCKMKEKLSINKNIILYHR

Sequences:

>Translated_315_residues
MNNSMVTVCIVTYNQKKYIEQCLDSIVNQKTDYSYQVIISDDASTDGTSEICAEYAKRYQFINHIRHATNIGAYENFKYV
HRQAKTQYVSHCDADDSWHEDKLEKQIKFLEGNSDCCAVYSNAIVINEHGTRIGVFNNSEEIPSKITIGYLLEKSNFLNN
SSMIYRRDMIGDIFDADGKVVDYRIHIHLANCGLLGYIKESLAFYRKGAAGGLCLNAPAAVGQLVHEARLDGIKNAKLSI
VDFSKIKTNAWYGKLTCFLKRNKFMYARHTEVEALIVDYDFIQSVMFLFFEIVIYFFCKMKEKLSINKNIILYHR
>Mature_315_residues
MNNSMVTVCIVTYNQKKYIEQCLDSIVNQKTDYSYQVIISDDASTDGTSEICAEYAKRYQFINHIRHATNIGAYENFKYV
HRQAKTQYVSHCDADDSWHEDKLEKQIKFLEGNSDCCAVYSNAIVINEHGTRIGVFNNSEEIPSKITIGYLLEKSNFLNN
SSMIYRRDMIGDIFDADGKVVDYRIHIHLANCGLLGYIKESLAFYRKGAAGGLCLNAPAAVGQLVHEARLDGIKNAKLSI
VDFSKIKTNAWYGKLTCFLKRNKFMYARHTEVEALIVDYDFIQSVMFLFFEIVIYFFCKMKEKLSINKNIILYHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36226; Mature: 36226

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSMVTVCIVTYNQKKYIEQCLDSIVNQKTDYSYQVIISDDASTDGTSEICAEYAKRYQ
CCCCEEEEEEEEECHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
FINHIRHATNIGAYENFKYVHRQAKTQYVSHCDADDSWHEDKLEKQIKFLEGNSDCCAVY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE
SNAIVINEHGTRIGVFNNSEEIPSKITIGYLLEKSNFLNNSSMIYRRDMIGDIFDADGKV
ECEEEEECCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEEEHHHHHHHCCCCCCE
VDYRIHIHLANCGLLGYIKESLAFYRKGAAGGLCLNAPAAVGQLVHEARLDGIKNAKLSI
EEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCCCCEEEE
VDFSKIKTNAWYGKLTCFLKRNKFMYARHTEVEALIVDYDFIQSVMFLFFEIVIYFFCKM
EEHHHHCCCCCEEEEEEEEECCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
KEKLSINKNIILYHR
HHHCCCCCCEEEEEC
>Mature Secondary Structure
MNNSMVTVCIVTYNQKKYIEQCLDSIVNQKTDYSYQVIISDDASTDGTSEICAEYAKRYQ
CCCCEEEEEEEEECHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
FINHIRHATNIGAYENFKYVHRQAKTQYVSHCDADDSWHEDKLEKQIKFLEGNSDCCAVY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE
SNAIVINEHGTRIGVFNNSEEIPSKITIGYLLEKSNFLNNSSMIYRRDMIGDIFDADGKV
ECEEEEECCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEEEHHHHHHHCCCCCCE
VDYRIHIHLANCGLLGYIKESLAFYRKGAAGGLCLNAPAAVGQLVHEARLDGIKNAKLSI
EEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCCCCEEEE
VDFSKIKTNAWYGKLTCFLKRNKFMYARHTEVEALIVDYDFIQSVMFLFFEIVIYFFCKM
EEHHHHCCCCCEEEEEEEEECCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
KEKLSINKNIILYHR
HHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]