Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is wbbJ [C]

Identifier: 120598291

GI number: 120598291

Start: 1660209

End: 1660769

Strand: Direct

Name: wbbJ [C]

Synonym: Sputw3181_1469

Alternate gene names: 120598291

Gene position: 1660209-1660769 (Clockwise)

Preceding gene: 120598290

Following gene: 120598292

Centisome position: 35.26

GC content: 42.42

Gene sequence:

>561_bases
ATGGCGTTTCTTACCGAGCAACAATTAAATTCTATGGGGTTTGCTGCACTGGGTTATAACGTGTTTATCTCTGACAAAGC
CTCTATTTATGGAGTCAGTCGTATTCGAATTGGAAACAATGTCCGCATCGATGATTTTTGCGTCTTGTCGGCGGGCGAGG
GGGGCATTGAGATTGGCAATTATATCCATATTGCGGTTTATAGTTCCTTAATTGGTGCAGGCAAGATTACACTATCTGAT
TTTTCTAATATCTCATCAAAAGTAGCTATTTATTCCAGTAATGATGATTATAGTGGCGAATATATGACTAACCCCATGGT
GCCTGCCAAATATACTAACGTCATCCATGCCGACGTAACCATTGGTAAGCATGTCATCATTGGCTCTGGTTCGGTCGTGT
TGCCTGGTGTCACCCTGTTTGCTGGGGCTGCCATCGGCTCACTTTCATTGGTTACCAAGGATTGTGAAGCCTTTGGGGTT
TACATCGGTTCGCCAGCTAGAAAGATTAAAAATCGCAAGCGAGAGTTGTTGGCTGTTGAAAACAATTTCATAGAAAAATA
A

Upstream 100 bases:

>100_bases
AATCAATTAGCAGACAAGGTTCTTTGTTTACCAATTTTTAATGAATTGACTGTGGACGAACAACAGCAGGTTATTGAGTT
AATTAAAGGGAATTAAATAA

Downstream 100 bases:

>100_bases
TAAGTGGCTAGTTGATACCTGTAAGGTACTATTATATGTTTTTTTATTTATTGAAGATGTTTAAAGTTAAATTTTTTTCA
TCAAGAAATCAAAGACTAAA

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: Transferase Hexapeptide Repeat Containing Protein; Hexapaptide Repeat-Containing Transferase; TDP-4-Oxo-6-Deoxy-D-Glucose Transaminase; Galactoside O-Acetyltransferase; O-Acetyltransferase; Acetyltransferase RfbO CysE/LacA/LpxA/NodL Family; LPS Biosynthesis O-Acetyl Transferase; CysE/LacA/LpxA/NodL Family O-Acyltransferase; Pseudogene; Lipopolysaccharide Biosynthesis O-Acetyl Transferase; DTDP-Viosamine N-Acetyltransferase; Acetyltransferase CysE/LacA/LpxA/NodL Family

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MAFLTEQQLNSMGFAALGYNVFISDKASIYGVSRIRIGNNVRIDDFCVLSAGEGGIEIGNYIHIAVYSSLIGAGKITLSD
FSNISSKVAIYSSNDDYSGEYMTNPMVPAKYTNVIHADVTIGKHVIIGSGSVVLPGVTLFAGAAIGSLSLVTKDCEAFGV
YIGSPARKIKNRKRELLAVENNFIEK

Sequences:

>Translated_186_residues
MAFLTEQQLNSMGFAALGYNVFISDKASIYGVSRIRIGNNVRIDDFCVLSAGEGGIEIGNYIHIAVYSSLIGAGKITLSD
FSNISSKVAIYSSNDDYSGEYMTNPMVPAKYTNVIHADVTIGKHVIIGSGSVVLPGVTLFAGAAIGSLSLVTKDCEAFGV
YIGSPARKIKNRKRELLAVENNFIEK
>Mature_185_residues
AFLTEQQLNSMGFAALGYNVFISDKASIYGVSRIRIGNNVRIDDFCVLSAGEGGIEIGNYIHIAVYSSLIGAGKITLSDF
SNISSKVAIYSSNDDYSGEYMTNPMVPAKYTNVIHADVTIGKHVIIGSGSVVLPGVTLFAGAAIGSLSLVTKDCEAFGVY
IGSPARKIKNRKRELLAVENNFIEK

Specific function: Putative O-Acetyltransferase That Transfers An O-Acetyl Group To The O Antigen. [C]

COG id: COG0110

COG function: function code R; Acetyltransferase (isoleucine patch superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.1.- [C]

Molecular weight: Translated: 19897; Mature: 19766

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFLTEQQLNSMGFAALGYNVFISDKASIYGVSRIRIGNNVRIDDFCVLSAGEGGIEIGN
CCCCCHHHHHHCCEEEECEEEEEECCCEEEEEEEEEECCCCEECCEEEEECCCCCEEECC
YIHIAVYSSLIGAGKITLSDFSNISSKVAIYSSNDDYSGEYMTNPMVPAKYTNVIHADVT
EEEEEEEHHHHCCCEEEECCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCEEEEEEEE
IGKHVIIGSGSVVLPGVTLFAGAAIGSLSLVTKDCEAFGVYIGSPARKIKNRKRELLAVE
ECCEEEEECCCEEECCHHHHHHHHHCCEEEEECCCCEEEEEECCHHHHHHHHHHHEEEEC
NNFIEK
CCCCCC
>Mature Secondary Structure 
AFLTEQQLNSMGFAALGYNVFISDKASIYGVSRIRIGNNVRIDDFCVLSAGEGGIEIGN
CCCCHHHHHHCCEEEECEEEEEECCCEEEEEEEEEECCCCEECCEEEEECCCCCEEECC
YIHIAVYSSLIGAGKITLSDFSNISSKVAIYSSNDDYSGEYMTNPMVPAKYTNVIHADVT
EEEEEEEHHHHCCCEEEECCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCEEEEEEEE
IGKHVIIGSGSVVLPGVTLFAGAAIGSLSLVTKDCEAFGVYIGSPARKIKNRKRELLAVE
ECCEEEEECCCEEECCHHHHHHHHHCCEEEEECCCCEEEEEECCHHHHHHHHHHHEEEEC
NNFIEK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA