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The map label for this gene is spsC [H]

Identifier: 120598290

GI number: 120598290

Start: 1659095

End: 1660204

Strand: Direct

Name: spsC [H]

Synonym: Sputw3181_1468

Alternate gene names: 120598290

Gene position: 1659095-1660204 (Clockwise)

Preceding gene: 120598289

Following gene: 120598291

Centisome position: 35.24

GC content: 43.24

Gene sequence:

>1110_bases
ATGAGTAATAAAAATATCCCTGTCACCCAGCCGTTTTTGCCAGAGTTAAATGAGTTTATCCCCTACCTAGAACAAATTTG
GGATAACCGCTGGTTGACTAACAATGGACCCTTTCATCAACAACTTGAAGCTAAGTTGTGTGAATATCTTGGTGTAGAAC
ATATCTCCCTGTTTAACAATGCCACGATTGCCTTGATCACGGCTCTTCAATCATTGCGTGTGACGGGTGAAGTTATCACC
ACGCCTTACTCTTTTGTCGCCACCAGTCACTCGATTATGTGGAATGGCTTGGAGCCGGTATTTGTCGATGTCGACCCAAC
CACTTTTAATATTGACCCAGCCAAAATAGAAGCTGCTATCACTCCACGCACAACTGCCATTATGCCAGTGCACTGCTATT
CCAATCCTTGCGATGTCGAAGCGATTCAAAATATTGCTGACAACTATGGTCTTAAGGTGATTTATGATGCCGCCCATGCC
TTTGGAGTTAACTATAAAGGCGAAAGTTTGCTGAAATGGGGCGATCTTTCTATTTTGAGCTTTCACGCCACCAAGGTGTT
CAATACCTTCGAAGGTGGGGCTATTATCAGTCCGGATGCCAAAACCAAGCAGCGTATCGATCGCTTGAAAAACTTTGGAA
TTGCCGATGAACTGACGGTGACAGCACCAGGCATTAATGGCAAGATGAGTGAAATCAATGCTGCTTTTGGCTTAGTCCAG
CTCAAGCATATTGATAATGCGATGGCACAACGCCGAGCTGTTGATGTCCGTTATCGTGAGGCATTGGCTGATGTAACAGG
CATTACCCTGTATAAGCACGATAGTAACGCTAATAGCAACTTCTCTTATTTTCCGATCTTGGTCGAGGCGGATTACCCAC
TCAGTCGCGATGAGCTATATGACAAGCTTAAAAATAATCATATTTTATCGCGCCGTTATTTTTACCCTCTGATCAGCAAT
ATGCCGATGTATCGTGGTTTACCGAGTGCAGCGATAAGTTATTTGCCGCAAGCCAATCAATTAGCAGACAAGGTTCTTTG
TTTACCAATTTTTAATGAATTGACTGTGGACGAACAACAGCAGGTTATTGAGTTAATTAAAGGGAATTAA

Upstream 100 bases:

>100_bases
CTTTATCTGGTCTTGGCCCAAAGGCCGTTGTTGCTGCAATTGCAAAGCGCCCTGCGTCGCTAACTAGTCGCATTATTACC
AATATTTTTTGGAAGCAAAC

Downstream 100 bases:

>100_bases
ATAAATGGCGTTTCTTACCGAGCAACAATTAAATTCTATGGGGTTTGCTGCACTGGGTTATAACGTGTTTATCTCTGACA
AAGCCTCTATTTATGGAGTC

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MSNKNIPVTQPFLPELNEFIPYLEQIWDNRWLTNNGPFHQQLEAKLCEYLGVEHISLFNNATIALITALQSLRVTGEVIT
TPYSFVATSHSIMWNGLEPVFVDVDPTTFNIDPAKIEAAITPRTTAIMPVHCYSNPCDVEAIQNIADNYGLKVIYDAAHA
FGVNYKGESLLKWGDLSILSFHATKVFNTFEGGAIISPDAKTKQRIDRLKNFGIADELTVTAPGINGKMSEINAAFGLVQ
LKHIDNAMAQRRAVDVRYREALADVTGITLYKHDSNANSNFSYFPILVEADYPLSRDELYDKLKNNHILSRRYFYPLISN
MPMYRGLPSAAISYLPQANQLADKVLCLPIFNELTVDEQQQVIELIKGN

Sequences:

>Translated_369_residues
MSNKNIPVTQPFLPELNEFIPYLEQIWDNRWLTNNGPFHQQLEAKLCEYLGVEHISLFNNATIALITALQSLRVTGEVIT
TPYSFVATSHSIMWNGLEPVFVDVDPTTFNIDPAKIEAAITPRTTAIMPVHCYSNPCDVEAIQNIADNYGLKVIYDAAHA
FGVNYKGESLLKWGDLSILSFHATKVFNTFEGGAIISPDAKTKQRIDRLKNFGIADELTVTAPGINGKMSEINAAFGLVQ
LKHIDNAMAQRRAVDVRYREALADVTGITLYKHDSNANSNFSYFPILVEADYPLSRDELYDKLKNNHILSRRYFYPLISN
MPMYRGLPSAAISYLPQANQLADKVLCLPIFNELTVDEQQQVIELIKGN
>Mature_368_residues
SNKNIPVTQPFLPELNEFIPYLEQIWDNRWLTNNGPFHQQLEAKLCEYLGVEHISLFNNATIALITALQSLRVTGEVITT
PYSFVATSHSIMWNGLEPVFVDVDPTTFNIDPAKIEAAITPRTTAIMPVHCYSNPCDVEAIQNIADNYGLKVIYDAAHAF
GVNYKGESLLKWGDLSILSFHATKVFNTFEGGAIISPDAKTKQRIDRLKNFGIADELTVTAPGINGKMSEINAAFGLVQL
KHIDNAMAQRRAVDVRYREALADVTGITLYKHDSNANSNFSYFPILVEADYPLSRDELYDKLKNNHILSRRYFYPLISNM
PMYRGLPSAAISYLPQANQLADKVLCLPIFNELTVDEQQQVIELIKGN

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=379, Percent_Identity=30.8707124010554, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI2367285, Length=381, Percent_Identity=27.8215223097113, Blast_Score=117, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41435; Mature: 41304

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKNIPVTQPFLPELNEFIPYLEQIWDNRWLTNNGPFHQQLEAKLCEYLGVEHISLFNN
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCHHEEHHCC
ATIALITALQSLRVTGEVITTPYSFVATSHSIMWNGLEPVFVDVDPTTFNIDPAKIEAAI
CHHHHHHHHHHHHHCCCEEECCHHHHHCCCEEEECCCCEEEEEECCCEECCCHHHEEEEE
TPRTTAIMPVHCYSNPCDVEAIQNIADNYGLKVIYDAAHAFGVNYKGESLLKWGDLSILS
CCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCEEEECCCEEEE
FHATKVFNTFEGGAIISPDAKTKQRIDRLKNFGIADELTVTAPGINGKMSEINAAFGLVQ
EHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHH
LKHIDNAMAQRRAVDVRYREALADVTGITLYKHDSNANSNFSYFPILVEADYPLSRDELY
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHH
DKLKNNHILSRRYFYPLISNMPMYRGLPSAAISYLPQANQLADKVLCLPIFNELTVDEQQ
HHHHCCCEEHHHHHHHHHHCCCHHCCCCHHHHHHCCCHHHHHHHEEEEEHHCCCCCCHHH
QVIELIKGN
HHHHHHCCC
>Mature Secondary Structure 
SNKNIPVTQPFLPELNEFIPYLEQIWDNRWLTNNGPFHQQLEAKLCEYLGVEHISLFNN
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCHHEEHHCC
ATIALITALQSLRVTGEVITTPYSFVATSHSIMWNGLEPVFVDVDPTTFNIDPAKIEAAI
CHHHHHHHHHHHHHCCCEEECCHHHHHCCCEEEECCCCEEEEEECCCEECCCHHHEEEEE
TPRTTAIMPVHCYSNPCDVEAIQNIADNYGLKVIYDAAHAFGVNYKGESLLKWGDLSILS
CCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCEEEECCCEEEE
FHATKVFNTFEGGAIISPDAKTKQRIDRLKNFGIADELTVTAPGINGKMSEINAAFGLVQ
EHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHH
LKHIDNAMAQRRAVDVRYREALADVTGITLYKHDSNANSNFSYFPILVEADYPLSRDELY
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHHH
DKLKNNHILSRRYFYPLISNMPMYRGLPSAAISYLPQANQLADKVLCLPIFNELTVDEQQ
HHHHCCCEEHHHHHHHHHHCCCHHCCCCHHHHHHCCCHHHHHHHEEEEEHHCCCCCCHHH
QVIELIKGN
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]