The gene/protein map for NC_008750 is currently unavailable.
Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

Click here to switch to the map view.

The map label for this gene is 120598204

Identifier: 120598204

GI number: 120598204

Start: 1571556

End: 1572671

Strand: Direct

Name: 120598204

Synonym: Sputw3181_1381

Alternate gene names: NA

Gene position: 1571556-1572671 (Clockwise)

Preceding gene: 120598203

Following gene: 120598205

Centisome position: 33.38

GC content: 39.87

Gene sequence:

>1116_bases
ATGAAATTGGCCATTCGTGTTGATGCTTCTATTAGAATCGGTATTGGCCATGTTACCCGTTGCTTAGCGTTCGCGAACGC
GTTAAAGAAAACCTTCCTTAATCTGGATATTACCTTTCTTTGTCGAAATGCACTTGGCAATATGAATGCCCACATACGTG
CACAAGGATACCGTGTTTGTGAGTTAGATATAAATGAGGTTGATTTGGCATTTACTGGTAGAGAACTACCTGTAAATTGT
CAGCAGAATGAGGCTGATATCTGTATTAAACAACTTGAAAGTAATAAGTATCATCTACTCATTGTCGATCATTATGGGTT
AAGTGAGTCTTTTTGCCGCAAGATGCGACTTAAATGCGAGCAAATCATGGTGATTGATGACTTAGCAAATCGTAAACACG
ATTGTGATTTACTGCTTGATCAAAATTTATTGCCTGAATTCAGTAATCGGTATCAGGATTTAGTCAACAAAGAGACTTTG
TTATTGTTAGGCCCTAAATATGCCTTATTAAGGGATGAGTTTTATTTGGAATACCATCCTATTTTGTTCGAAAAAGTACC
AAATATTTTAATTTTTTTTGGTGGAAGTGACTCCGCAAATGTCACTCGAACTGCGTTGTTGGGGCTGACTCGGGTTTTAA
AACCAGAATTCAAAGCTCAAGATTTTAATATTGATGTTGTTCTGGGGGCCTCGAATCCCTGGAAAGAAAGTCTATTTGCG
GAATTTGCAGATTGTCAGAACCTAAAGTGGCATGTGCACTGCGATTATATTGCAAAGTTGATGGTAAATGCGACCTTATC
ACTCGGCGCGGGCGGGAGTAGCCATTGGGAGCGTTGTATCACTGGAGTACCTTCAGTTGTTATCACAGTTGCCGATAACC
AGATTGCAACAACCCAATACCTTGCTTCATTAGGAGCTTGTCTCTTTCTTGGGGACGTTAAGGATGTCACTTCTGAGGAG
ATTGCTCTAGCGGTTAACAGGCTCTTAGAGTCATTAGAATTACGTCAACAATTATCGAATAATGCGCGACACATCATCAA
GCCTAACGATGGTTTGCCCAGAGTTTTAGATGTCTTAAAAACACATTTGGCTACAACAGGTATGGGAGAAAGTTAA

Upstream 100 bases:

>100_bases
TGAAACTCTTGCCCAATTATATGGTTGCAGATATTGATACCTTAGAGGATTGGGAACGCGCCGAGGTGTTATACGATGTA
TTGAAAAAGCAAGGAAAGTT

Downstream 100 bases:

>100_bases
ATCATGCAGGTAATCAAAGTTGACCATTGTCACATCGGTCCTGGCCAGCCAGTATTTGTCATTGCAGAATTATCAGGAAA
CCATGGGCAATCGCTTGAAA

Product: FlaR protein (FlaR)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKLAIRVDASIRIGIGHVTRCLAFANALKKTFLNLDITFLCRNALGNMNAHIRAQGYRVCELDINEVDLAFTGRELPVNC
QQNEADICIKQLESNKYHLLIVDHYGLSESFCRKMRLKCEQIMVIDDLANRKHDCDLLLDQNLLPEFSNRYQDLVNKETL
LLLGPKYALLRDEFYLEYHPILFEKVPNILIFFGGSDSANVTRTALLGLTRVLKPEFKAQDFNIDVVLGASNPWKESLFA
EFADCQNLKWHVHCDYIAKLMVNATLSLGAGGSSHWERCITGVPSVVITVADNQIATTQYLASLGACLFLGDVKDVTSEE
IALAVNRLLESLELRQQLSNNARHIIKPNDGLPRVLDVLKTHLATTGMGES

Sequences:

>Translated_371_residues
MKLAIRVDASIRIGIGHVTRCLAFANALKKTFLNLDITFLCRNALGNMNAHIRAQGYRVCELDINEVDLAFTGRELPVNC
QQNEADICIKQLESNKYHLLIVDHYGLSESFCRKMRLKCEQIMVIDDLANRKHDCDLLLDQNLLPEFSNRYQDLVNKETL
LLLGPKYALLRDEFYLEYHPILFEKVPNILIFFGGSDSANVTRTALLGLTRVLKPEFKAQDFNIDVVLGASNPWKESLFA
EFADCQNLKWHVHCDYIAKLMVNATLSLGAGGSSHWERCITGVPSVVITVADNQIATTQYLASLGACLFLGDVKDVTSEE
IALAVNRLLESLELRQQLSNNARHIIKPNDGLPRVLDVLKTHLATTGMGES
>Mature_371_residues
MKLAIRVDASIRIGIGHVTRCLAFANALKKTFLNLDITFLCRNALGNMNAHIRAQGYRVCELDINEVDLAFTGRELPVNC
QQNEADICIKQLESNKYHLLIVDHYGLSESFCRKMRLKCEQIMVIDDLANRKHDCDLLLDQNLLPEFSNRYQDLVNKETL
LLLGPKYALLRDEFYLEYHPILFEKVPNILIFFGGSDSANVTRTALLGLTRVLKPEFKAQDFNIDVVLGASNPWKESLFA
EFADCQNLKWHVHCDYIAKLMVNATLSLGAGGSSHWERCITGVPSVVITVADNQIATTQYLASLGACLFLGDVKDVTSEE
IALAVNRLLESLELRQQLSNNARHIIKPNDGLPRVLDVLKTHLATTGMGES

Specific function: Unknown

COG id: COG3980

COG function: function code M; Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR007235
- InterPro:   IPR020023 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF04101 Glyco_tran_28_C [H]

EC number: NA

Molecular weight: Translated: 41618; Mature: 41618

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAIRVDASIRIGIGHVTRCLAFANALKKTFLNLDITFLCRNALGNMNAHIRAQGYRVC
CEEEEEECCEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCEEEE
ELDINEVDLAFTGRELPVNCQQNEADICIKQLESNKYHLLIVDHYGLSESFCRKMRLKCE
EEECCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCHH
QIMVIDDLANRKHDCDLLLDQNLLPEFSNRYQDLVNKETLLLLGPKYALLRDEFYLEYHP
HEEEEHHHCCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEECCCCEEHHHCEEEEECC
ILFEKVPNILIFFGGSDSANVTRTALLGLTRVLKPEFKAQDFNIDVVLGASNPWKESLFA
HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHH
EFADCQNLKWHVHCDYIAKLMVNATLSLGAGGSSHWERCITGVPSVVITVADNQIATTQY
HHHCCCCCEEEEEHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCEEEEEECCCCHHHHHH
LASLGACLFLGDVKDVTSEEIALAVNRLLESLELRQQLSNNARHIIKPNDGLPRVLDVLK
HHHHHHHEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHH
THLATTGMGES
HHHHCCCCCCC
>Mature Secondary Structure
MKLAIRVDASIRIGIGHVTRCLAFANALKKTFLNLDITFLCRNALGNMNAHIRAQGYRVC
CEEEEEECCEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCEEEE
ELDINEVDLAFTGRELPVNCQQNEADICIKQLESNKYHLLIVDHYGLSESFCRKMRLKCE
EEECCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCHH
QIMVIDDLANRKHDCDLLLDQNLLPEFSNRYQDLVNKETLLLLGPKYALLRDEFYLEYHP
HEEEEHHHCCCCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEECCCCEEHHHCEEEEECC
ILFEKVPNILIFFGGSDSANVTRTALLGLTRVLKPEFKAQDFNIDVVLGASNPWKESLFA
HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHH
EFADCQNLKWHVHCDYIAKLMVNATLSLGAGGSSHWERCITGVPSVVITVADNQIATTQY
HHHCCCCCEEEEEHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCEEEEEECCCCHHHHHH
LASLGACLFLGDVKDVTSEEIALAVNRLLESLELRQQLSNNARHIIKPNDGLPRVLDVLK
HHHHHHHEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHH
THLATTGMGES
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]