The gene/protein map for NC_008750 is currently unavailable.
Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598034

Identifier: 120598034

GI number: 120598034

Start: 1368462

End: 1369304

Strand: Direct

Name: 120598034

Synonym: Sputw3181_1211

Alternate gene names: NA

Gene position: 1368462-1369304 (Clockwise)

Preceding gene: 120598031

Following gene: 120598035

Centisome position: 29.06

GC content: 45.55

Gene sequence:

>843_bases
ATGTCTACTGAACATCTACTGTTAGTCGGACTATTAAAAAAACTAAAAGAGGATGTCCTCGTGTTACCTACCTTGCCAGA
AGTGGCAATGCGGGTGCAGGAAGTTGTCGGGCGCCCAGATGCAAGCCTTAAACAAGTGGCTGAAGTGATAGGCCAGGATG
CGGCGATTTCAGCTCGTATTATCAAAGTGGCCAATAGTGCTTTATACAGCCGTGGTGTTCCCGCAGAAAGTATTAGTGGC
GCGGTTTCCCGAATTGGGTTAATTCAGATCAAAAGTATTGCGACTTCTGTGGCGATGGAGCAACTCTTTATCTCCACCAA
TGAAATGGTGTGGGAAGTGATGGATGAAGTGTGGCGTACTTCGATTGATGTTACTGCCGCAGCTTGCGCTATATTGCACA
TGTACAATAAAAGTAAACCCAATAGTGGGCTTAACTTTGACACTCTAACCTTGGCGGGATTAGTCCATAATATTGGTGCT
TTACCCGTGCTTACCGAGGCTGAGACACATCCAGAGTTGTTTGCCAGTATCGAACAATTAAGATCTTTAGTGCGAAAAAT
GCAGGGCCCGCTTGGGCGCGCAGTATTAAAAAGTTGGGACTTTGCACCTGACGTTATGGCCGTAGTTGAACGTTGGGCCG
ATTTGCCTTATCTACCAGAACATGTCACTTACTTAGATTTTATCCGTGCAGCCGCTTTTTATACTGGTGAATTACGTGCA
GGTACCGAGCTTGAACAGCGCCTTGATGTGTTTGTTGCTAGGGGATTACCTGTGACAGCGGATGCGTTAGCCAGTGATGA
GTTTATGGAAAAATTCCATTCAATTAGAGAAAGTTACCAATAG

Upstream 100 bases:

>100_bases
CTGCTTTTTCTACCCATCTCATCACAGCCAACTGATATACTCCAACTATCCAATGTTTATGTTGATATGTTGATATGTTG
ATAGATTGATGGGAGCTAAG

Downstream 100 bases:

>100_bases
CAGTTAGGCTGCGCGCTAAGGTTGAGGCCTAGGTATGATCAGGATGGAATTTATCGCTATAGCATTGCTTATTATCCTGA
TAGGCGTGCTATATATTCTG

Product: putative signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSTEHLLLVGLLKKLKEDVLVLPTLPEVAMRVQEVVGRPDASLKQVAEVIGQDAAISARIIKVANSALYSRGVPAESISG
AVSRIGLIQIKSIATSVAMEQLFISTNEMVWEVMDEVWRTSIDVTAAACAILHMYNKSKPNSGLNFDTLTLAGLVHNIGA
LPVLTEAETHPELFASIEQLRSLVRKMQGPLGRAVLKSWDFAPDVMAVVERWADLPYLPEHVTYLDFIRAAAFYTGELRA
GTELEQRLDVFVARGLPVTADALASDEFMEKFHSIRESYQ

Sequences:

>Translated_280_residues
MSTEHLLLVGLLKKLKEDVLVLPTLPEVAMRVQEVVGRPDASLKQVAEVIGQDAAISARIIKVANSALYSRGVPAESISG
AVSRIGLIQIKSIATSVAMEQLFISTNEMVWEVMDEVWRTSIDVTAAACAILHMYNKSKPNSGLNFDTLTLAGLVHNIGA
LPVLTEAETHPELFASIEQLRSLVRKMQGPLGRAVLKSWDFAPDVMAVVERWADLPYLPEHVTYLDFIRAAAFYTGELRA
GTELEQRLDVFVARGLPVTADALASDEFMEKFHSIRESYQ
>Mature_279_residues
STEHLLLVGLLKKLKEDVLVLPTLPEVAMRVQEVVGRPDASLKQVAEVIGQDAAISARIIKVANSALYSRGVPAESISGA
VSRIGLIQIKSIATSVAMEQLFISTNEMVWEVMDEVWRTSIDVTAAACAILHMYNKSKPNSGLNFDTLTLAGLVHNIGAL
PVLTEAETHPELFASIEQLRSLVRKMQGPLGRAVLKSWDFAPDVMAVVERWADLPYLPEHVTYLDFIRAAAFYTGELRAG
TELEQRLDVFVARGLPVTADALASDEFMEKFHSIRESYQ

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR013976 [H]

Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 30817; Mature: 30686

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEHLLLVGLLKKLKEDVLVLPTLPEVAMRVQEVVGRPDASLKQVAEVIGQDAAISARI
CCCCHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH
IKVANSALYSRGVPAESISGAVSRIGLIQIKSIATSVAMEQLFISTNEMVWEVMDEVWRT
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIDVTAAACAILHMYNKSKPNSGLNFDTLTLAGLVHNIGALPVLTEAETHPELFASIEQL
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHH
RSLVRKMQGPLGRAVLKSWDFAPDVMAVVERWADLPYLPEHVTYLDFIRAAAFYTGELRA
HHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
GTELEQRLDVFVARGLPVTADALASDEFMEKFHSIRESYQ
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STEHLLLVGLLKKLKEDVLVLPTLPEVAMRVQEVVGRPDASLKQVAEVIGQDAAISARI
CCCHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH
IKVANSALYSRGVPAESISGAVSRIGLIQIKSIATSVAMEQLFISTNEMVWEVMDEVWRT
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIDVTAAACAILHMYNKSKPNSGLNFDTLTLAGLVHNIGALPVLTEAETHPELFASIEQL
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHH
RSLVRKMQGPLGRAVLKSWDFAPDVMAVVERWADLPYLPEHVTYLDFIRAAAFYTGELRA
HHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
GTELEQRLDVFVARGLPVTADALASDEFMEKFHSIRESYQ
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]