Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is yhbT [H]

Identifier: 120598031

GI number: 120598031

Start: 1365897

End: 1366433

Strand: Direct

Name: yhbT [H]

Synonym: Sputw3181_1208

Alternate gene names: 120598031

Gene position: 1365897-1366433 (Clockwise)

Preceding gene: 120598028

Following gene: 120598034

Centisome position: 29.01

GC content: 43.2

Gene sequence:

>537_bases
ATGTCCGCTGTTTTTTCAGCAAAATTAGCAAAACAACTCCTTGAAATTACACCTAAGTTGATGAGTTTTCCCCTCGCAAA
AGTCCCTTTTAGCCTTAAGGCGAAAGTGATTAGCCAATTGCTTGGGCTTTTGCTTGCTTCGCAGGCAGCGGATGATGAAC
TGGACTTTTTAGCAGGAAAATGGGTTGCTATTCGAGTTGAGGATTTACACCTGAATTTTGAAGTGACTTTTGATGGCCAA
TGGCAAGTGAGAGAGTTAACTCAGGCGCAGGTTACCTTTAGTGCCAACTCCGCAGAGTTAGTGTTAGTTGCAGCAGCCAA
AGAAGACCCTGACACGTTATTTTTTCAGCGTAAGCTGAATATTGAAGGGGATACAGAATTGGGGCTTGAGGTGAAAAACC
TATTACTCAGTATCGAATTTTCAACAATGCCAACGCCGATACGTCTGAGTATCGAAAAGCTGGCAGCGATCATTGAGCGA
TTACAAATAGAGGCTAAGCCAACGGTGATTCTGAGTAAATCCCCCAGTTTTAACTAG

Upstream 100 bases:

>100_bases
GCAAGATTGAATCGTGGTGAATTGATTTAAAACAGGTTTAAGATCATAAAATCCCGCTAAACTGGGACATATCGTGTTTT
ATTTTTGTAGGATATTGATT

Downstream 100 bases:

>100_bases
GGCGTGTTGATATTTCGAGATTAATATTGTTTGGTAGGGATAAAGCAAAAGCCCTGAGTTTACTCTCAGGGCTTTTTGAT
TAGTGGCACCTATAACTAGA

Product: sterol-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSAVFSAKLAKQLLEITPKLMSFPLAKVPFSLKAKVISQLLGLLLASQAADDELDFLAGKWVAIRVEDLHLNFEVTFDGQ
WQVRELTQAQVTFSANSAELVLVAAAKEDPDTLFFQRKLNIEGDTELGLEVKNLLLSIEFSTMPTPIRLSIEKLAAIIER
LQIEAKPTVILSKSPSFN

Sequences:

>Translated_178_residues
MSAVFSAKLAKQLLEITPKLMSFPLAKVPFSLKAKVISQLLGLLLASQAADDELDFLAGKWVAIRVEDLHLNFEVTFDGQ
WQVRELTQAQVTFSANSAELVLVAAAKEDPDTLFFQRKLNIEGDTELGLEVKNLLLSIEFSTMPTPIRLSIEKLAAIIER
LQIEAKPTVILSKSPSFN
>Mature_177_residues
SAVFSAKLAKQLLEITPKLMSFPLAKVPFSLKAKVISQLLGLLLASQAADDELDFLAGKWVAIRVEDLHLNFEVTFDGQW
QVRELTQAQVTFSANSAELVLVAAAKEDPDTLFFQRKLNIEGDTELGLEVKNLLLSIEFSTMPTPIRLSIEKLAAIIERL
QIEAKPTVILSKSPSFN

Specific function: Unknown

COG id: COG3154

COG function: function code I; Putative lipid carrier protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789547, Length=153, Percent_Identity=44.4444444444444, Blast_Score=134, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003033
- InterPro:   IPR016830 [H]

Pfam domain/function: PF02036 SCP2 [H]

EC number: NA

Molecular weight: Translated: 19697; Mature: 19566

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVFSAKLAKQLLEITPKLMSFPLAKVPFSLKAKVISQLLGLLLASQAADDELDFLAGK
CCCHHHHHHHHHHHHHCHHHHHCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
WVAIRVEDLHLNFEVTFDGQWQVRELTQAQVTFSANSAELVLVAAAKEDPDTLFFQRKLN
EEEEEEEEEEEEEEEEECCCEEEEECCEEEEEEECCCCEEEEEEECCCCCCEEEEEEEEC
IEGDTELGLEVKNLLLSIEFSTMPTPIRLSIEKLAAIIERLQIEAKPTVILSKSPSFN
CCCCCCCCCEEEEEEEEEEECCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCCCC
>Mature Secondary Structure 
SAVFSAKLAKQLLEITPKLMSFPLAKVPFSLKAKVISQLLGLLLASQAADDELDFLAGK
CCHHHHHHHHHHHHHCHHHHHCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCC
WVAIRVEDLHLNFEVTFDGQWQVRELTQAQVTFSANSAELVLVAAAKEDPDTLFFQRKLN
EEEEEEEEEEEEEEEEECCCEEEEECCEEEEEEECCCCEEEEEEECCCCCCEEEEEEEEC
IEGDTELGLEVKNLLLSIEFSTMPTPIRLSIEKLAAIIERLQIEAKPTVILSKSPSFN
CCCCCCCCCEEEEEEEEEEECCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]