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The map label for this gene is ssb [H]

Identifier: 120597975

GI number: 120597975

Start: 1302860

End: 1303279

Strand: Direct

Name: ssb [H]

Synonym: Sputw3181_1152

Alternate gene names: 120597975

Gene position: 1302860-1303279 (Clockwise)

Preceding gene: 120597974

Following gene: 120597976

Centisome position: 27.67

GC content: 47.38

Gene sequence:

>420_bases
ATGAAAAACCAAGTAACACTCATAGGCTACGTTGGCGCTGAGCCAGAGACACGAGCCTATCCATCAGGTGATTTAGTGAC
CAGTATTTCACTGGCTACTTCTGAGAAATGGCGCGACCGTCAATCCAATGAGCTCAAAGAGCATACGGAATGGCATCGGG
TTGTTTTTCGAGATCGTGGTGGATTTAAGTTAGGGCTAAGAGCAAAAGATTTGATCCAAAAAGGAGCGAAGCTTTTTGTT
CAAGGGCCTCAGCGCACGCGCTCATGGGAGAAAGATGGCATTAAGCATCGATTGACTGAAGTGGACGCGGACGAGTTTCT
GCTTCTTGATAGTGTGAACAAAGCATCCGAGCCATCACCGGCGGATGATGCGAGCTCCCAAGCTAATTGGGCACAAACTT
ATCCTGAACCAGATTTTTAA

Upstream 100 bases:

>100_bases
TTTACTCGAAATACCAACCTATCTGCGTCGTCAGTCTTCTTTGCCCAGCCGGGTAGAAGCGACTGTGTGCACAGAGTTCA
ACTAAGACGAGGAGAACATC

Downstream 100 bases:

>100_bases
CCGAGCGATAACGCTTTAACCCAGCCGGGAGTACTTTCCCGTCAGGGGCAGACTCCCACTTTGATTGTCGGAGTCCAAAA
TGGAAAAACCAAAGCTAATC

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKNQVTLIGYVGAEPETRAYPSGDLVTSISLATSEKWRDRQSNELKEHTEWHRVVFRDRGGFKLGLRAKDLIQKGAKLFV
QGPQRTRSWEKDGIKHRLTEVDADEFLLLDSVNKASEPSPADDASSQANWAQTYPEPDF

Sequences:

>Translated_139_residues
MKNQVTLIGYVGAEPETRAYPSGDLVTSISLATSEKWRDRQSNELKEHTEWHRVVFRDRGGFKLGLRAKDLIQKGAKLFV
QGPQRTRSWEKDGIKHRLTEVDADEFLLLDSVNKASEPSPADDASSQANWAQTYPEPDF
>Mature_139_residues
MKNQVTLIGYVGAEPETRAYPSGDLVTSISLATSEKWRDRQSNELKEHTEWHRVVFRDRGGFKLGLRAKDLIQKGAKLFV
QGPQRTRSWEKDGIKHRLTEVDADEFLLLDSVNKASEPSPADDASSQANWAQTYPEPDF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=100, Percent_Identity=44, Blast_Score=88, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 15760; Mature: 15760

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQVTLIGYVGAEPETRAYPSGDLVTSISLATSEKWRDRQSNELKEHTEWHRVVFRDRG
CCCCEEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
GFKLGLRAKDLIQKGAKLFVQGPQRTRSWEKDGIKHRLTEVDADEFLLLDSVNKASEPSP
CEEECCCHHHHHHHCCCEEEECCHHHCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCC
ADDASSQANWAQTYPEPDF
CCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MKNQVTLIGYVGAEPETRAYPSGDLVTSISLATSEKWRDRQSNELKEHTEWHRVVFRDRG
CCCCEEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
GFKLGLRAKDLIQKGAKLFVQGPQRTRSWEKDGIKHRLTEVDADEFLLLDSVNKASEPSP
CEEECCCHHHHHHHCCCEEEECCHHHCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCC
ADDASSQANWAQTYPEPDF
CCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]