Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597974

Identifier: 120597974

GI number: 120597974

Start: 1302518

End: 1302844

Strand: Direct

Name: 120597974

Synonym: Sputw3181_1151

Alternate gene names: NA

Gene position: 1302518-1302844 (Clockwise)

Preceding gene: 120597971

Following gene: 120597975

Centisome position: 27.66

GC content: 45.87

Gene sequence:

>327_bases
ATGGAATATATCTTCGGATTTATTATCCAAATCGCAGGCATTATGTTGCTTGCAAAACTGAGCTGGTCGCTTTTGCGATT
ACTTGCTCGTCAAAGCGTGCGCCCGTTTCGATTTGTACTTACTCAAATCAAGCGATTGCTCACACCAACATCAAAACGTC
GTCCAATGGCAGTGCCTAAAGTTCCTGGTATGCCCCGTTTGACATCTGCGTTTTACAAAGAGCCACATCAGTACGACATG
GCTTTACTCGAAATACCAACCTATCTGCGTCGTCAGTCTTCTTTGCCCAGCCGGGTAGAAGCGACTGTGTGCACAGAGTT
CAACTAA

Upstream 100 bases:

>100_bases
GCAACCATGCGTTCCTTACGGTTCGCCTTTTTACCACCCAACTGGGGGAGTTTTCCCCAGTTGGGGGTGACTCCTTCACA
ACCAAATTAAGGAGTCACCA

Downstream 100 bases:

>100_bases
GACGAGGAGAACATCATGAAAAACCAAGTAACACTCATAGGCTACGTTGGCGCTGAGCCAGAGACACGAGCCTATCCATC
AGGTGATTTAGTGACCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MEYIFGFIIQIAGIMLLAKLSWSLLRLLARQSVRPFRFVLTQIKRLLTPTSKRRPMAVPKVPGMPRLTSAFYKEPHQYDM
ALLEIPTYLRRQSSLPSRVEATVCTEFN

Sequences:

>Translated_108_residues
MEYIFGFIIQIAGIMLLAKLSWSLLRLLARQSVRPFRFVLTQIKRLLTPTSKRRPMAVPKVPGMPRLTSAFYKEPHQYDM
ALLEIPTYLRRQSSLPSRVEATVCTEFN
>Mature_108_residues
MEYIFGFIIQIAGIMLLAKLSWSLLRLLARQSVRPFRFVLTQIKRLLTPTSKRRPMAVPKVPGMPRLTSAFYKEPHQYDM
ALLEIPTYLRRQSSLPSRVEATVCTEFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12542; Mature: 12542

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYIFGFIIQIAGIMLLAKLSWSLLRLLARQSVRPFRFVLTQIKRLLTPTSKRRPMAVPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
VPGMPRLTSAFYKEPHQYDMALLEIPTYLRRQSSLPSRVEATVCTEFN
CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MEYIFGFIIQIAGIMLLAKLSWSLLRLLARQSVRPFRFVLTQIKRLLTPTSKRRPMAVPK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
VPGMPRLTSAFYKEPHQYDMALLEIPTYLRRQSSLPSRVEATVCTEFN
CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA