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The map label for this gene is flgF [H]

Identifier: 120597306

GI number: 120597306

Start: 517064

End: 517798

Strand: Direct

Name: flgF [H]

Synonym: Sputw3181_0475

Alternate gene names: 120597306

Gene position: 517064-517798 (Clockwise)

Preceding gene: 120597305

Following gene: 120597307

Centisome position: 10.98

GC content: 48.57

Gene sequence:

>735_bases
ATGGAGAAGATGCTTTATACCGCGGCGAGCGGTGCAGTTCGTATTCTTGAAGCGCAAAGTATTCGTGCGAATAACTTGGC
TAACGCTGAAACCGCAGGGTTTAAAGCCGATCTAGAGCGGGTGAATGCGGTTGCTTTGGCTGCTCAAGGTAATAGCTTAA
ATACGCGGGTAATGGCGCAGACCGAAAACAGTGGTTTTAGCCACCAAAGTGGGGTGATCAACCCTACAGGTCGAACCTTG
GATTTGGCGATTCGGGACCGTGGATTATTTACGGTTGCCGTCGAGGGGGGCGAGGCTTATACCCGTTCAGGGGCTTTGAT
TGCTAATGCCGAGGGAGAGTTAACCATTGATGGCCGGCCAGTATTAGGAAACGATGGCCCTATCGTACTCCCTGAGCATA
AAGATCTGTTCATCGGTGAAGATGGTACCGTCAGTGTGTTGCCTTCAGAAGGTGGGATCATTGAAGAAGTTGGTCGATTA
AAACTAGTCAATCCCGATTTAGCTTTAATGCAAAAAGGCCAAGATGGTTTGCTTTACGGCCGAGATGGTCAGTTGATGGC
GCAGGATGATGGCGTACTGGTCGATAGTGGATTCCTTGAATCGAGTAACGTGCAGGCCGTGTCGGAGCTTATTGCGTCGA
TGGATCTGAGCCGTCAGTTTGAAATTCAAGTTAAGTTAATGAAAAGTGCCGAAAAACTAGCTGAGGCTGGTAATCGTTTG
CTGGGTAATGTTTAA

Upstream 100 bases:

>100_bases
TGTCGGCACAGCGTAATTATCAGTCCAACGCTAAAGTGCTCGATGTTAACTCGACAATGCAGCAAGCGTTACTTAATGCC
ATTTAATACGAGACGCTAAC

Downstream 100 bases:

>100_bases
GGATTAGTGGTATGCAATCAGCGTTATGGGTAAGTAAAACTGGCCTAACAGCACAAGATACGAAAATGACCGCCATTGCC
AACAACTTGGCAAACGTGAA

Product: flagellar basal-body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MEKMLYTAASGAVRILEAQSIRANNLANAETAGFKADLERVNAVALAAQGNSLNTRVMAQTENSGFSHQSGVINPTGRTL
DLAIRDRGLFTVAVEGGEAYTRSGALIANAEGELTIDGRPVLGNDGPIVLPEHKDLFIGEDGTVSVLPSEGGIIEEVGRL
KLVNPDLALMQKGQDGLLYGRDGQLMAQDDGVLVDSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSAEKLAEAGNRL
LGNV

Sequences:

>Translated_244_residues
MEKMLYTAASGAVRILEAQSIRANNLANAETAGFKADLERVNAVALAAQGNSLNTRVMAQTENSGFSHQSGVINPTGRTL
DLAIRDRGLFTVAVEGGEAYTRSGALIANAEGELTIDGRPVLGNDGPIVLPEHKDLFIGEDGTVSVLPSEGGIIEEVGRL
KLVNPDLALMQKGQDGLLYGRDGQLMAQDDGVLVDSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSAEKLAEAGNRL
LGNV
>Mature_244_residues
MEKMLYTAASGAVRILEAQSIRANNLANAETAGFKADLERVNAVALAAQGNSLNTRVMAQTENSGFSHQSGVINPTGRTL
DLAIRDRGLFTVAVEGGEAYTRSGALIANAEGELTIDGRPVLGNDGPIVLPEHKDLFIGEDGTVSVLPSEGGIIEEVGRL
KLVNPDLALMQKGQDGLLYGRDGQLMAQDDGVLVDSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSAEKLAEAGNRL
LGNV

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=253, Percent_Identity=38.3399209486166, Blast_Score=148, Evalue=2e-37,
Organism=Escherichia coli, GI1787318, Length=267, Percent_Identity=27.3408239700375, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25794; Mature: 25794

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKMLYTAASGAVRILEAQSIRANNLANAETAGFKADLERVNAVALAAQGNSLNTRVMAQ
CCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHCEEEEEEECCCCCCEEEEEE
TENSGFSHQSGVINPTGRTLDLAIRDRGLFTVAVEGGEAYTRSGALIANAEGELTIDGRP
ECCCCCCCCCCEECCCCCEEEEEEECCCEEEEEEECCCEEECCCCEEECCCCEEEECCEE
VLGNDGPIVLPEHKDLFIGEDGTVSVLPSEGGIIEEVGRLKLVNPDLALMQKGQDGLLYG
EECCCCCEEEECCCCEEECCCCEEEEEECCCCHHHHCCCEEEECCCHHHHCCCCCCEEEC
RDGQLMAQDDGVLVDSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSAEKLAEAGNRL
CCCCEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHH
LGNV
HCCC
>Mature Secondary Structure
MEKMLYTAASGAVRILEAQSIRANNLANAETAGFKADLERVNAVALAAQGNSLNTRVMAQ
CCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHCEEEEEEECCCCCCEEEEEE
TENSGFSHQSGVINPTGRTLDLAIRDRGLFTVAVEGGEAYTRSGALIANAEGELTIDGRP
ECCCCCCCCCCEECCCCCEEEEEEECCCEEEEEEECCCEEECCCCEEECCCCEEEECCEE
VLGNDGPIVLPEHKDLFIGEDGTVSVLPSEGGIIEEVGRLKLVNPDLALMQKGQDGLLYG
EECCCCCEEEECCCCEEECCCCEEEEEECCCCHHHHCCCEEEECCCHHHHCCCCCCEEEC
RDGQLMAQDDGVLVDSGFLESSNVQAVSELIASMDLSRQFEIQVKLMKSAEKLAEAGNRL
CCCCEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHH
LGNV
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]