Click here to switch to the map view.

The map label for this gene is flgE

Identifier: 120597305

GI number: 120597305

Start: 515862

End: 517049

Strand: Direct

Name: flgE

Synonym: Sputw3181_0474

Alternate gene names: 120597305

Gene position: 515862-517049 (Clockwise)

Preceding gene: 120597304

Following gene: 120597306

Centisome position: 10.96

GC content: 46.38

Gene sequence:

>1188_bases
ATGTCATTTAACATAGCTTTAAGTGGATTACAGGCGACGACCCAAGACCTCAATACCATCAGTAATAACATCGCTAACGC
ATCAACCAATGGTTTCCGTGGTGGACGCAGCGAGTTTGCATCTATCTATAACGGTGGCCAAGCGGGTGGTGTTAGTGTGA
TGTCCACGACGCAGAACTTTTCTAAGGGTGGCAGCTTAACGTACACAGGCCGTCAACTTGATATGGGCATTCAAGGAGAA
GGCTTCTTTGTGCTTAAGGGCACCGATGGCGGCGCTATGTATGCTAGAGCGGGGATGTTCCACAAGGATAGCCAAGGCTT
CATTACCGACCCCGTAGGCAGTCGTTTGCAGGGATATTCTGTGAATGCCACCGGAAAAATCCAGCAAGGTAATGTGGGTG
ATTTACAGGTACAAACCGCATCACTTGCAGCAAAAGCGACAACTCAAGTTGGCCTTGTTTCCAATTTAGATGCCAGAGTA
GACCCTATAGCCGTTGCTTTTGATCCTAAAGATATCAATAGCTATCACTCAATTGGAACGACTAGCGTTTATGATTCCTT
GGGTGCAGAGCATGTTGTGACTCAGTATTATGTCAAAACTGCACCGAATGAATGGACTGTTAATTACACTCTGGATGGCG
TTCAACTCACCGAACAAACGACATTAACATTTGACGCTAAAGGTGTTTTAGACCCAACAACGACCAAACAAGCCTTCGAT
CTTACCTTACCTAATGGCGCATCCAACCTCCAGTTTGAAATCAATTTCGATAAAAGCACTCAGTATGCCGCCAAATACAA
CAACTCCAGCTTATCTCAAGACGGTTATACCTCGGGTGAATTGAAAGGGGTGCGCTTAGATGATAACGGTATGCTGTATG
GCACTTATACCAACGGCCAAGAGCAGTTACAGGGACAAGTCATCCTTGCTAACTTCAGCAATCCAAATGGTTTGTCCGCA
GTGAGTAACAATGCTTGGGTCGCGACTAATACGGCGGGACAAGCGATTACTGGCGCGCCATCAACGGGCACTATGGGAAC
CGTAACTGGCGGGTATTTAGAGGGCTCGAATGTCGATACGACTGCTGAAATGGTTAACCTTATGTCGGCACAGCGTAATT
ATCAGTCCAACGCTAAAGTGCTCGATGTTAACTCGACAATGCAGCAAGCGTTACTTAATGCCATTTAA

Upstream 100 bases:

>100_bases
TGCATCGGGCATGATGATGGCTGAAATGGGCCATGGTGTCGGTGTGATTTCAGTTCTCAATATTTCTGAAGTTTCGTAAC
TCATTTTATAGGAAATTAAG

Downstream 100 bases:

>100_bases
TACGAGACGCTAACATGGAGAAGATGCTTTATACCGCGGCGAGCGGTGCAGTTCGTATTCTTGAAGCGCAAAGTATTCGT
GCGAATAACTTGGCTAACGC

Product: flagellar hook protein FlgE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MSFNIALSGLQATTQDLNTISNNIANASTNGFRGGRSEFASIYNGGQAGGVSVMSTTQNFSKGGSLTYTGRQLDMGIQGE
GFFVLKGTDGGAMYARAGMFHKDSQGFITDPVGSRLQGYSVNATGKIQQGNVGDLQVQTASLAAKATTQVGLVSNLDARV
DPIAVAFDPKDINSYHSIGTTSVYDSLGAEHVVTQYYVKTAPNEWTVNYTLDGVQLTEQTTLTFDAKGVLDPTTTKQAFD
LTLPNGASNLQFEINFDKSTQYAAKYNNSSLSQDGYTSGELKGVRLDDNGMLYGTYTNGQEQLQGQVILANFSNPNGLSA
VSNNAWVATNTAGQAITGAPSTGTMGTVTGGYLEGSNVDTTAEMVNLMSAQRNYQSNAKVLDVNSTMQQALLNAI

Sequences:

>Translated_395_residues
MSFNIALSGLQATTQDLNTISNNIANASTNGFRGGRSEFASIYNGGQAGGVSVMSTTQNFSKGGSLTYTGRQLDMGIQGE
GFFVLKGTDGGAMYARAGMFHKDSQGFITDPVGSRLQGYSVNATGKIQQGNVGDLQVQTASLAAKATTQVGLVSNLDARV
DPIAVAFDPKDINSYHSIGTTSVYDSLGAEHVVTQYYVKTAPNEWTVNYTLDGVQLTEQTTLTFDAKGVLDPTTTKQAFD
LTLPNGASNLQFEINFDKSTQYAAKYNNSSLSQDGYTSGELKGVRLDDNGMLYGTYTNGQEQLQGQVILANFSNPNGLSA
VSNNAWVATNTAGQAITGAPSTGTMGTVTGGYLEGSNVDTTAEMVNLMSAQRNYQSNAKVLDVNSTMQQALLNAI
>Mature_394_residues
SFNIALSGLQATTQDLNTISNNIANASTNGFRGGRSEFASIYNGGQAGGVSVMSTTQNFSKGGSLTYTGRQLDMGIQGEG
FFVLKGTDGGAMYARAGMFHKDSQGFITDPVGSRLQGYSVNATGKIQQGNVGDLQVQTASLAAKATTQVGLVSNLDARVD
PIAVAFDPKDINSYHSIGTTSVYDSLGAEHVVTQYYVKTAPNEWTVNYTLDGVQLTEQTTLTFDAKGVLDPTTTKQAFDL
TLPNGASNLQFEINFDKSTQYAAKYNNSSLSQDGYTSGELKGVRLDDNGMLYGTYTNGQEQLQGQVILANFSNPNGLSAV
SNNAWVATNTAGQAITGAPSTGTMGTVTGGYLEGSNVDTTAEMVNLMSAQRNYQSNAKVLDVNSTMQQALLNAI

Specific function: Unknown

COG id: COG1749

COG function: function code N; Flagellar hook protein FlgE

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787316, Length=403, Percent_Identity=38.4615384615385, Blast_Score=236, Evalue=2e-63,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR011491
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013 [H]

Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 41682; Mature: 41551

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNIALSGLQATTQDLNTISNNIANASTNGFRGGRSEFASIYNGGQAGGVSVMSTTQNF
CEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCC
SKGGSLTYTGRQLDMGIQGEGFFVLKGTDGGAMYARAGMFHKDSQGFITDPVGSRLQGYS
CCCCCEEEECCEEECCCCCCCEEEEEECCCCEEEEECCCCEECCCCCEECCCCCCCCCEE
VNATGKIQQGNVGDLQVQTASLAAKATTQVGLVSNLDARVDPIAVAFDPKDINSYHSIGT
ECCCCEEECCCCCCEEEEEHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCHHHCCCC
TSVYDSLGAEHVVTQYYVKTAPNEWTVNYTLDGVQLTEQTTLTFDAKGVLDPTTTKQAFD
HHHHHHCCHHHHEEEEEEEECCCCEEEEEEECCEEEECEEEEEEECCCCCCCCCCCEEEE
LTLPNGASNLQFEINFDKSTQYAAKYNNSSLSQDGYTSGELKGVRLDDNGMLYGTYTNGQ
EECCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCH
EQLQGQVILANFSNPNGLSAVSNNAWVATNTAGQAITGAPSTGTMGTVTGGYLEGSNVDT
HHCCCEEEEEECCCCCCCCEECCCCEEEECCCCCEEECCCCCCCCCCEECCEEECCCCCH
TAEMVNLMSAQRNYQSNAKVLDVNSTMQQALLNAI
HHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCC
>Mature Secondary Structure 
SFNIALSGLQATTQDLNTISNNIANASTNGFRGGRSEFASIYNGGQAGGVSVMSTTQNF
EEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCC
SKGGSLTYTGRQLDMGIQGEGFFVLKGTDGGAMYARAGMFHKDSQGFITDPVGSRLQGYS
CCCCCEEEECCEEECCCCCCCEEEEEECCCCEEEEECCCCEECCCCCEECCCCCCCCCEE
VNATGKIQQGNVGDLQVQTASLAAKATTQVGLVSNLDARVDPIAVAFDPKDINSYHSIGT
ECCCCEEECCCCCCEEEEEHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCHHHCCCC
TSVYDSLGAEHVVTQYYVKTAPNEWTVNYTLDGVQLTEQTTLTFDAKGVLDPTTTKQAFD
HHHHHHCCHHHHEEEEEEEECCCCEEEEEEECCEEEECEEEEEEECCCCCCCCCCCEEEE
LTLPNGASNLQFEINFDKSTQYAAKYNNSSLSQDGYTSGELKGVRLDDNGMLYGTYTNGQ
EECCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCH
EQLQGQVILANFSNPNGLSAVSNNAWVATNTAGQAITGAPSTGTMGTVTGGYLEGSNVDT
HHCCCEEEEEECCCCCCCCEECCCCEEEECCCCCEEECCCCCCCCCCEECCEEECCCCCH
TAEMVNLMSAQRNYQSNAKVLDVNSTMQQALLNAI
HHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]