| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is flgG [H]
Identifier: 120597307
GI number: 120597307
Start: 517810
End: 518595
Strand: Direct
Name: flgG [H]
Synonym: Sputw3181_0476
Alternate gene names: 120597307
Gene position: 517810-518595 (Clockwise)
Preceding gene: 120597306
Following gene: 120597308
Centisome position: 11.0
GC content: 46.31
Gene sequence:
>786_bases ATGCAATCAGCGTTATGGGTAAGTAAAACTGGCCTAACAGCACAAGATACGAAAATGACCGCCATTGCCAACAACTTGGC AAACGTGAATACCACAGGCTTTAAGCGTGATCGTGTCGCCTTTAATGATCTTTTTTATCAAGTCCAGCGTCAGCCGGGCG GTCAGGTCGATGCATTAAATAACCTCCCCTCCGGATTACAACTCGGAGCTGGTACAAGGGTCGTGGGTACCCAAAAAATA TTCACGACAGGGGATATGCAAAATACCAGTCAGCAACTGGATTTGGCGATTCAAGGCCATGGTTTTTTTCAAGTTGAAGA ACCTAATGGCGATCTTGCTTATACCCGTGATGGTCAGTTTTATCGCAGCAGTGAAGGCATGATGGTCACGTCGCAAGGGC TACCCTTAGTGCCTAATATTGTGATCCCTGAAGATGCATTAACTGTCACTATTGCGAGTGATGGTGTTGTTACTGCACAA ATGGCTGGCGAAGCTGAGCCACAAGATTTAGGTCAAATCACACTGGTTAATTTTACCAATCCAGCAGGATTAGAGGCACG TGGTGACAACCTTTACCGTGAAACTGCGGCATCGGGTGTGGCTGTTGAAGGTGTCGCTGGTGATCAAGCTTTAGGTGCTT TAAGACAGGGCGCACTAGAGGGCGCAAACGTCAATGTAGTGGAAGAAATGGTTGAAATGATTTCTACCCAAAGAGCATAT GAGATGAATGCCAAGGTCGTTTCAGCCTCAGACGATATGCTCAAATTCCTCAATCAATCGGTTTAG
Upstream 100 bases:
>100_bases TGAGCCGTCAGTTTGAAATTCAAGTTAAGTTAATGAAAAGTGCCGAAAAACTAGCTGAGGCTGGTAATCGTTTGCTGGGT AATGTTTAAGGATTAGTGGT
Downstream 100 bases:
>100_bases GGAGGCGGTAATGCACTGGTTATGGCTTTTATGTTTTGCACTGCTGTCGGGTTGTATGTCACATATTCCAGATCAGGAAA CCAAACCTGGAACCAAAGAG
Product: flagellar basal-body rod protein FlgG
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDALNNLPSGLQLGAGTRVVGTQKI FTTGDMQNTSQQLDLAIQGHGFFQVEEPNGDLAYTRDGQFYRSSEGMMVTSQGLPLVPNIVIPEDALTVTIASDGVVTAQ MAGEAEPQDLGQITLVNFTNPAGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAY EMNAKVVSASDDMLKFLNQSV
Sequences:
>Translated_261_residues MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDALNNLPSGLQLGAGTRVVGTQKI FTTGDMQNTSQQLDLAIQGHGFFQVEEPNGDLAYTRDGQFYRSSEGMMVTSQGLPLVPNIVIPEDALTVTIASDGVVTAQ MAGEAEPQDLGQITLVNFTNPAGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAY EMNAKVVSASDDMLKFLNQSV >Mature_261_residues MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDALNNLPSGLQLGAGTRVVGTQKI FTTGDMQNTSQQLDLAIQGHGFFQVEEPNGDLAYTRDGQFYRSSEGMMVTSQGLPLVPNIVIPEDALTVTIASDGVVTAQ MAGEAEPQDLGQITLVNFTNPAGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAY EMNAKVVSASDDMLKFLNQSV
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=259, Percent_Identity=50.965250965251, Blast_Score=260, Evalue=6e-71, Organism=Escherichia coli, GI1787317, Length=250, Percent_Identity=34, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1787316, Length=115, Percent_Identity=42.6086956521739, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 27809; Mature: 27809
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDALN CCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHH NLPSGLQLGAGTRVVGTQKIFTTGDMQNTSQQLDLAIQGHGFFQVEEPNGDLAYTRDGQF CCCCCCEECCCCEEEECEEEEEECCCCCCCCEEEEEEECCCEEEEECCCCCEEEECCCCE YRSSEGMMVTSQGLPLVPNIVIPEDALTVTIASDGVVTAQMAGEAEPQDLGQITLVNFTN EECCCCEEEECCCCCCCCCEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECC PAGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAY CCCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHE EMNAKVVSASDDMLKFLNQSV ECCCEEEECCHHHHHHHHHCC >Mature Secondary Structure MQSALWVSKTGLTAQDTKMTAIANNLANVNTTGFKRDRVAFNDLFYQVQRQPGGQVDALN CCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHH NLPSGLQLGAGTRVVGTQKIFTTGDMQNTSQQLDLAIQGHGFFQVEEPNGDLAYTRDGQF CCCCCCEECCCCEEEECEEEEEECCCCCCCCEEEEEEECCCEEEEECCCCCEEEECCCCE YRSSEGMMVTSQGLPLVPNIVIPEDALTVTIASDGVVTAQMAGEAEPQDLGQITLVNFTN EECCCCEEEECCCCCCCCCEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECC PAGLEARGDNLYRETAASGVAVEGVAGDQALGALRQGALEGANVNVVEEMVEMISTQRAY CCCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHE EMNAKVVSASDDMLKFLNQSV ECCCEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]