| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
Click here to switch to the map view.
The map label for this gene is flgB
Identifier: 120597302
GI number: 120597302
Start: 514401
End: 514751
Strand: Direct
Name: flgB
Synonym: Sputw3181_0471
Alternate gene names: 120597302
Gene position: 514401-514751 (Clockwise)
Preceding gene: 120597298
Following gene: 120597303
Centisome position: 10.93
GC content: 40.74
Gene sequence:
>351_bases ATGGCTATCAACCTTGATAAAGCATTAGGAATACATCCTCAGACACTCGATTTTAGAGTGGAGAGAAGCAAGGTATTAGC GAGCAATTTAATCAATGCCGAAACTCCAGGGTATAAAGCAAGAGATTTAGATTTCAAGGCAGCCATGAAGCAGGTTGAAG CTGGCATGCAAATGAATCAACAGTACAGTCTTGCTTATCGCATGCCTTATCAAAACTCCGCCGATGATAATACCGTGGAA CTCGGTAAAGAACAGGCGAGATATTCACAGAATGCGATGGATTATCAAACGAGTTTGACTTTTTTGAACATGAAAATAGC AGGTCTAAAATCTGCCATTGAAGGTCGTTAG
Upstream 100 bases:
>100_bases CATGTAACCAACTGTTTTATATTGATAAGTATATTGGCATGCTAATTGTAAGCTGCTTGGCCATCGATATTAATTTAGGC ATACAGTACTAGGAGTTTAG
Downstream 100 bases:
>100_bases GAGCCTATATGTCATTTGGTGATATTTATCAGATAGCGGGTGCTGGCATGAATGCCCAGACCATACGTCTAAATACGGTG GCGAGTAACCTCGCTAATGC
Product: flagellar basal body rod protein FlgB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MAINLDKALGIHPQTLDFRVERSKVLASNLINAETPGYKARDLDFKAAMKQVEAGMQMNQQYSLAYRMPYQNSADDNTVE LGKEQARYSQNAMDYQTSLTFLNMKIAGLKSAIEGR
Sequences:
>Translated_116_residues MAINLDKALGIHPQTLDFRVERSKVLASNLINAETPGYKARDLDFKAAMKQVEAGMQMNQQYSLAYRMPYQNSADDNTVE LGKEQARYSQNAMDYQTSLTFLNMKIAGLKSAIEGR >Mature_115_residues AINLDKALGIHPQTLDFRVERSKVLASNLINAETPGYKARDLDFKAAMKQVEAGMQMNQQYSLAYRMPYQNSADDNTVEL GKEQARYSQNAMDYQTSLTFLNMKIAGLKSAIEGR
Specific function: Unknown
COG id: COG1815
COG function: function code N; Flagellar basal body protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787313, Length=131, Percent_Identity=34.3511450381679, Blast_Score=80, Evalue=3e-17,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR006300 [H]
Pfam domain/function: PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 13054; Mature: 12923
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINLDKALGIHPQTLDFRVERSKVLASNLINAETPGYKARDLDFKAAMKQVEAGMQMNQ CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC QYSLAYRMPYQNSADDNTVELGKEQARYSQNAMDYQTSLTFLNMKIAGLKSAIEGR CEEEEEECCCCCCCCCCHHHHCHHHHHHHCCCHHHHHHHEEEEEHHHHHHHHCCCC >Mature Secondary Structure AINLDKALGIHPQTLDFRVERSKVLASNLINAETPGYKARDLDFKAAMKQVEAGMQMNQ CCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC QYSLAYRMPYQNSADDNTVELGKEQARYSQNAMDYQTSLTFLNMKIAGLKSAIEGR CEEEEEECCCCCCCCCCHHHHCHHHHHHHCCCHHHHHHHEEEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA