Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597298

Identifier: 120597298

GI number: 120597298

Start: 512238

End: 512660

Strand: Direct

Name: 120597298

Synonym: Sputw3181_0467

Alternate gene names: NA

Gene position: 512238-512660 (Clockwise)

Preceding gene: 120597297

Following gene: 120597302

Centisome position: 10.88

GC content: 43.26

Gene sequence:

>423_bases
ATGAGCCAGCGTCATCTCTCTAAGTTATGTATACAAGCTGAAAAAAAGTTAGCCCAGCTTGGTCAAAAGCGCGAAGATTC
CAGCCAGAATGTCCAACTGAACCAACAACAGCATCAAGCCCTGTCGCAGATGATTTTTACTTACCGTGGTGCTAAAGAAG
GCGGCAATGTTTTACTTTGGCAAAATTCGGCAAGTATGGCGCAAGCCCTTGAACCCATGCGGGTAAAGTTAGTTCAAAAA
GACATGTTTCTTCAACAGGAGCAACAACGTATTGATCGGCTTTGGCGTAAACAGTTAGGGCGTCAACAAAGTTTAAAGTG
GCTTGAAAAACAAACACATCTTCAGGAAAAGGCGCGAGTGGCTCGCAATGAGCAGGCCATAGTTGATGATATGGCAGGTA
TCTATTATAAGAAGAAAAGTTAA

Upstream 100 bases:

>100_bases
TACCCAGAGATGGCAAAATTTTTACGTCAAACCACGCAAACTAAAATCAATCTCGCCGAGAGTTTAGTGCAGTTAGAGCA
ATTGATGGGAGTCATGGGAT

Downstream 100 bases:

>100_bases
TCAGTTCAGGGAGTCACCACAATACCACTCTTGCCTATGATAGAGTGCTTTGGACACTCCCGCTCATAGAGTTTACTTAA
CGTTTGGCGCCGTAATCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSQRHLSKLCIQAEKKLAQLGQKREDSSQNVQLNQQQHQALSQMIFTYRGAKEGGNVLLWQNSASMAQALEPMRVKLVQK
DMFLQQEQQRIDRLWRKQLGRQQSLKWLEKQTHLQEKARVARNEQAIVDDMAGIYYKKKS

Sequences:

>Translated_140_residues
MSQRHLSKLCIQAEKKLAQLGQKREDSSQNVQLNQQQHQALSQMIFTYRGAKEGGNVLLWQNSASMAQALEPMRVKLVQK
DMFLQQEQQRIDRLWRKQLGRQQSLKWLEKQTHLQEKARVARNEQAIVDDMAGIYYKKKS
>Mature_139_residues
SQRHLSKLCIQAEKKLAQLGQKREDSSQNVQLNQQQHQALSQMIFTYRGAKEGGNVLLWQNSASMAQALEPMRVKLVQKD
MFLQQEQQRIDRLWRKQLGRQQSLKWLEKQTHLQEKARVARNEQAIVDDMAGIYYKKKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16451; Mature: 16320

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRHLSKLCIQAEKKLAQLGQKREDSSQNVQLNQQQHQALSQMIFTYRGAKEGGNVLLW
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
QNSASMAQALEPMRVKLVQKDMFLQQEQQRIDRLWRKQLGRQQSLKWLEKQTHLQEKARV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
ARNEQAIVDDMAGIYYKKKS
HHCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQRHLSKLCIQAEKKLAQLGQKREDSSQNVQLNQQQHQALSQMIFTYRGAKEGGNVLLW
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
QNSASMAQALEPMRVKLVQKDMFLQQEQQRIDRLWRKQLGRQQSLKWLEKQTHLQEKARV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
ARNEQAIVDDMAGIYYKKKS
HHCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA