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The map label for this gene is flgC [H]

Identifier: 120597303

GI number: 120597303

Start: 514760

End: 515176

Strand: Direct

Name: flgC [H]

Synonym: Sputw3181_0472

Alternate gene names: 120597303

Gene position: 514760-515176 (Clockwise)

Preceding gene: 120597302

Following gene: 120597304

Centisome position: 10.93

GC content: 47.48

Gene sequence:

>417_bases
ATGTCATTTGGTGATATTTATCAGATAGCGGGTGCTGGCATGAATGCCCAGACCATACGTCTAAATACGGTGGCGAGTAA
CCTCGCTAATGCGGGGGCTGCTGCCGAAACTCCTGAGTCAGCCTATCGTGCCTTAAAGCCAGTATTTGCCACTATTTACG
ATTCAACTCAACAAGGGGCTATCGGAGCGTCGATTGAGGTGAGCGATATAGTGCAGGCCGATGCGCCATTAGATATGCGT
TATGAGCCGAATCATCCCTTTGCCAATGAACAAGGTTATGTCGCTTATTCTAACGTAAACACCATTGAAGAAATGGCTGA
CATGATGGCAGCGAGCCGTTCATTTGAGACCAGTGTAGAGGTGATGAATCGTGCTCGCTCTATGCAGCAGGGCTTATTGC
AACTAGGAAATAAATAG

Upstream 100 bases:

>100_bases
GATATTCACAGAATGCGATGGATTATCAAACGAGTTTGACTTTTTTGAACATGAAAATAGCAGGTCTAAAATCTGCCATT
GAAGGTCGTTAGGAGCCTAT

Downstream 100 bases:

>100_bases
CATGGAAGTGGCTAGCGCAACAAATAACCCAGTCCAGAATCCTGCTGGCGCATTGGCGGCACCGGGGAATGATGCAGCAT
CATTAAAAAATGAATTTATG

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSFGDIYQIAGAGMNAQTIRLNTVASNLANAGAAAETPESAYRALKPVFATIYDSTQQGAIGASIEVSDIVQADAPLDMR
YEPNHPFANEQGYVAYSNVNTIEEMADMMAASRSFETSVEVMNRARSMQQGLLQLGNK

Sequences:

>Translated_138_residues
MSFGDIYQIAGAGMNAQTIRLNTVASNLANAGAAAETPESAYRALKPVFATIYDSTQQGAIGASIEVSDIVQADAPLDMR
YEPNHPFANEQGYVAYSNVNTIEEMADMMAASRSFETSVEVMNRARSMQQGLLQLGNK
>Mature_137_residues
SFGDIYQIAGAGMNAQTIRLNTVASNLANAGAAAETPESAYRALKPVFATIYDSTQQGAIGASIEVSDIVQADAPLDMRY
EPNHPFANEQGYVAYSNVNTIEEMADMMAASRSFETSVEVMNRARSMQQGLLQLGNK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=136, Percent_Identity=39.7058823529412, Blast_Score=102, Evalue=7e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14832; Mature: 14701

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFGDIYQIAGAGMNAQTIRLNTVASNLANAGAAAETPESAYRALKPVFATIYDSTQQGA
CCCCHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
IGASIEVSDIVQADAPLDMRYEPNHPFANEQGYVAYSNVNTIEEMADMMAASRSFETSVE
CCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHH
VMNRARSMQQGLLQLGNK
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFGDIYQIAGAGMNAQTIRLNTVASNLANAGAAAETPESAYRALKPVFATIYDSTQQGA
CCCHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
IGASIEVSDIVQADAPLDMRYEPNHPFANEQGYVAYSNVNTIEEMADMMAASRSFETSVE
CCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHH
VMNRARSMQQGLLQLGNK
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]