Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120596950

Identifier: 120596950

GI number: 120596950

Start: 143623

End: 144387

Strand: Direct

Name: 120596950

Synonym: Sputw3181_0117

Alternate gene names: NA

Gene position: 143623-144387 (Clockwise)

Preceding gene: 120596949

Following gene: 120596951

Centisome position: 3.05

GC content: 34.25

Gene sequence:

>765_bases
ATGTGTAATAAAAATGTGGTATCTATTTTAGTCAGTGCAATCCTGTTTAGTGGTTCCGTGTATGCTGATATAAATAAAAC
AAGCGTGGATTTAGGTTATAAGTTTTATACCAGTGACACAAAAGATGATAACCCAGGTGTTTTTAATCAACCCTTTGTAA
AGTTAAATCATTTGGGAATTGCTGACTGGGGGACTTACTTTGCTAATCTTAAGTTAGAAAACCCAGCAGAAATCGCGGAA
AATCAGAAGCATGTTGATGGTAAGACGACGATTAAGTCATTATTGATACTGGAAAATAAGCTGGGGGAATCGCAGTTTAA
CTTCTGGACTCAGAACTTTATCTCTGCGAGTGAAACGCTAGTTGAAGATAACCTTTACCTAGGTTTGACTCATAACGCAA
AAGTTCAAAATCTATCATTAAACTATGGTGTTGGTTTCAATTATACCATTGGTAATTTTTCACCCACATCAGAGAAGTTT
AACGATTTATCAGGCTATGCTGTTGTTTTAAATGCAAAGTACCCCCTTGAATTGTTAGGGTTAAAACATAGTTTAAGTTT
GAATTATGAAGCGCAAATTGATAGGGATAAAGCGCATCAAGCATTATTTTCATATAACAGCTATGGCCATCAGATAATCA
CAACATTACAAACAAACATCACAGATTCAATATTTTCAAAGTTATATCTCACTCATTATGATAGTTGGGGGTCTCAATAT
AATGATGGGTTTGAATACGGTATATCTATTGGTTATCAGTTTTAA

Upstream 100 bases:

>100_bases
ATAGTAATCATGCGGTTCGTAGTAACTTTATTAAATAAAGTTTACGAGATGTGGGGGTATTTAAATATATTCCCTCATAA
ACATGGTTGAGAGGGGCTCT

Downstream 100 bases:

>100_bases
TGGGTTATCAGATTGTTTGAATTTTTAATATATAGAATCTCATTTAATTGGATGTTGTTCTATTTTTTATCAAGAATAAT
AAGGGAATTGTAATGCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MCNKNVVSILVSAILFSGSVYADINKTSVDLGYKFYTSDTKDDNPGVFNQPFVKLNHLGIADWGTYFANLKLENPAEIAE
NQKHVDGKTTIKSLLILENKLGESQFNFWTQNFISASETLVEDNLYLGLTHNAKVQNLSLNYGVGFNYTIGNFSPTSEKF
NDLSGYAVVLNAKYPLELLGLKHSLSLNYEAQIDRDKAHQALFSYNSYGHQIITTLQTNITDSIFSKLYLTHYDSWGSQY
NDGFEYGISIGYQF

Sequences:

>Translated_254_residues
MCNKNVVSILVSAILFSGSVYADINKTSVDLGYKFYTSDTKDDNPGVFNQPFVKLNHLGIADWGTYFANLKLENPAEIAE
NQKHVDGKTTIKSLLILENKLGESQFNFWTQNFISASETLVEDNLYLGLTHNAKVQNLSLNYGVGFNYTIGNFSPTSEKF
NDLSGYAVVLNAKYPLELLGLKHSLSLNYEAQIDRDKAHQALFSYNSYGHQIITTLQTNITDSIFSKLYLTHYDSWGSQY
NDGFEYGISIGYQF
>Mature_254_residues
MCNKNVVSILVSAILFSGSVYADINKTSVDLGYKFYTSDTKDDNPGVFNQPFVKLNHLGIADWGTYFANLKLENPAEIAE
NQKHVDGKTTIKSLLILENKLGESQFNFWTQNFISASETLVEDNLYLGLTHNAKVQNLSLNYGVGFNYTIGNFSPTSEKF
NDLSGYAVVLNAKYPLELLGLKHSLSLNYEAQIDRDKAHQALFSYNSYGHQIITTLQTNITDSIFSKLYLTHYDSWGSQY
NDGFEYGISIGYQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28577; Mature: 28577

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCNKNVVSILVSAILFSGSVYADINKTSVDLGYKFYTSDTKDDNPGVFNQPFVKLNHLGI
CCCHHHHHHHHHHHHHCCCEEEECCCEEEEECEEEEECCCCCCCCCCCCCCCEEEEECCE
ADWGTYFANLKLENPAEIAENQKHVDGKTTIKSLLILENKLGESQFNFWTQNFISASETL
ECCCCEEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHE
VEDNLYLGLTHNAKVQNLSLNYGVGFNYTIGNFSPTSEKFNDLSGYAVVLNAKYPLELLG
EECCEEEEEECCCEEEEEEEEECCCEEEEECCCCCCHHHHCCCCCEEEEEECCCCHHEEC
LKHSLSLNYEAQIDRDKAHQALFSYNSYGHQIITTLQTNITDSIFSKLYLTHYDSWGSQY
CEEHEECCEEEECCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCC
NDGFEYGISIGYQF
CCCEEEEEEEEECC
>Mature Secondary Structure
MCNKNVVSILVSAILFSGSVYADINKTSVDLGYKFYTSDTKDDNPGVFNQPFVKLNHLGI
CCCHHHHHHHHHHHHHCCCEEEECCCEEEEECEEEEECCCCCCCCCCCCCCCEEEEECCE
ADWGTYFANLKLENPAEIAENQKHVDGKTTIKSLLILENKLGESQFNFWTQNFISASETL
ECCCCEEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHE
VEDNLYLGLTHNAKVQNLSLNYGVGFNYTIGNFSPTSEKFNDLSGYAVVLNAKYPLELLG
EECCEEEEEECCCEEEEEEEEECCCEEEEECCCCCCHHHHCCCCCEEEEEECCCCHHEEC
LKHSLSLNYEAQIDRDKAHQALFSYNSYGHQIITTLQTNITDSIFSKLYLTHYDSWGSQY
CEEHEECCEEEECCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCC
NDGFEYGISIGYQF
CCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA