| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is phoR [C]
Identifier: 120596949
GI number: 120596949
Start: 142202
End: 143443
Strand: Direct
Name: phoR [C]
Synonym: Sputw3181_0116
Alternate gene names: 120596949
Gene position: 142202-143443 (Clockwise)
Preceding gene: 120596948
Following gene: 120596950
Centisome position: 3.02
GC content: 40.98
Gene sequence:
>1242_bases ATGCAAGCGCCTAAACTTAGCCTCAAGCGTAGCTATCAAGTGTGGGGCGTTATTTTTCTATTAATAACCTTAGGTGTGAA TAGTTTTATCCCGCTTTGCATGATGTGTGCAGGTATGATTTCTATGCATGAAGTCACAATGCACAATGCAGGGCAAGCGG CCGAAGCGTTACTGAAGATGGCGGAGCCAACTCAGCAATCATTACTTCATCAACCACTTCTAAAAACCGATAACTTAACC GTCTATCCTCATTGGCGAGATATTCCGCTGCAAATTCGTGAGTTAAGTAACAATGAAGTTTTAACTGATGCGAGCAAAAT TCTCTATGAGCATGCAGAAGGTCCCATTGTAAACGCGTTAAGTGTGTACTACACACAAGCTGGCCAGCCGCTATACGTTT GGCTGCAGTTTAGTGTTACCCATGATTTGCAATTTGCCCCTAAAAACATGACCGCCATTTTGCTGCTGGTATTGATAACC TTTTGTGCCAGTGCAAGCTTAGCGTTTTATATGCAAAGTAAAGTGATTACGCCTGTGCATCAAATTAGCCAAGCGATTAA GCAGCATGATTGGGAGGCAGGAGGCAAACTGAGTTTGCCGCAACAAGAATATGCAGAACTAAAAGCCATTGTTGATGCTC TAGATAACTCGATTTTACAGCTTCAAGAGGCTCAGCAACGCGAACTCAATTTTTTACGCTTTGCTAGCCATGAGTTACGT ACACCAGTTGCCATATGCCAATCCTCATTCGAAATCCTCGCATTACAACAAGGTGAGCTTACTGGTGCAACTCTGTATGC TTCCCAAGCGACCAATCAAATGAAGTCACTCATTGAAACCTTGCTATGGTTGACCAATAAAGAGTGTTCCAGTTTAGAAA AGGAAAACGTCGCGTTATCGCCTTTACTTGCCAGTATTATCGAGGAGCAGCAACGGGTACATGGTCATGAGCAAAAAATT CAATTATTTTCTGACGATACTTATTTTTCCGTTCAACTTCATCCGTTAAAAATCATATTAAGCAATTTATTAAGGAATAG TATTGAGCATGGTGGAGCAGATATTAGCATTACTCAAATTGCTCGTTGTATAGAAATAACCAATTCCTACAATAGTAATG GCCGTCATGGGTTTGGTTTAGGGCTATTACTGGTGAAGCGTCTTGCTAATCAACTGGGCTGGATTTTTACTTGCTCATCA GAAAATAATTTATTTACTGCTAGGTTGGTAATCTCTAAATAA
Upstream 100 bases:
>100_bases AGTCATATTCATCTTTTGCGCCGAGTGATCGATCGCCCCTTTGAGCGGCAAATATTACATACGATTCGTGGTGTCGGTTT AAGTCTTAGGGATGAAATCA
Downstream 100 bases:
>100_bases ATCAATAATAGTGACTGTAAATTTACTGCATTAAACCACACACTTTTAAAATGCAAAAGCGCCTTTGGGCTTAGATCACA TAGTAATCATGCGGTTCGTA
Product: ATPase domain-containing protein
Products: NA
Alternate protein names: Histidine Kinase; Histidine Kinase A Domain-Containing Protein; Two-Component System Sensor Protein; Two-Component Sensor; Signal Transduction Histidine Kinase; Signal Transduction Histidine Kinase-Like; ATPase Histidine Kinase- DNA Gyrase B- And; Sensory Transduction Protein Kinase; Periplasmic Sensor Signal Transduction Histidine Kinase; Histidine Kinase A Domain Protein; Two Component Sensor Histidine Kinase; Two-Component System Sensor Histidine Kinase; Hamp Domain Protein
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MQAPKLSLKRSYQVWGVIFLLITLGVNSFIPLCMMCAGMISMHEVTMHNAGQAAEALLKMAEPTQQSLLHQPLLKTDNLT VYPHWRDIPLQIRELSNNEVLTDASKILYEHAEGPIVNALSVYYTQAGQPLYVWLQFSVTHDLQFAPKNMTAILLLVLIT FCASASLAFYMQSKVITPVHQISQAIKQHDWEAGGKLSLPQQEYAELKAIVDALDNSILQLQEAQQRELNFLRFASHELR TPVAICQSSFEILALQQGELTGATLYASQATNQMKSLIETLLWLTNKECSSLEKENVALSPLLASIIEEQQRVHGHEQKI QLFSDDTYFSVQLHPLKIILSNLLRNSIEHGGADISITQIARCIEITNSYNSNGRHGFGLGLLLVKRLANQLGWIFTCSS ENNLFTARLVISK
Sequences:
>Translated_413_residues MQAPKLSLKRSYQVWGVIFLLITLGVNSFIPLCMMCAGMISMHEVTMHNAGQAAEALLKMAEPTQQSLLHQPLLKTDNLT VYPHWRDIPLQIRELSNNEVLTDASKILYEHAEGPIVNALSVYYTQAGQPLYVWLQFSVTHDLQFAPKNMTAILLLVLIT FCASASLAFYMQSKVITPVHQISQAIKQHDWEAGGKLSLPQQEYAELKAIVDALDNSILQLQEAQQRELNFLRFASHELR TPVAICQSSFEILALQQGELTGATLYASQATNQMKSLIETLLWLTNKECSSLEKENVALSPLLASIIEEQQRVHGHEQKI QLFSDDTYFSVQLHPLKIILSNLLRNSIEHGGADISITQIARCIEITNSYNSNGRHGFGLGLLLVKRLANQLGWIFTCSS ENNLFTARLVISK >Mature_413_residues MQAPKLSLKRSYQVWGVIFLLITLGVNSFIPLCMMCAGMISMHEVTMHNAGQAAEALLKMAEPTQQSLLHQPLLKTDNLT VYPHWRDIPLQIRELSNNEVLTDASKILYEHAEGPIVNALSVYYTQAGQPLYVWLQFSVTHDLQFAPKNMTAILLLVLIT FCASASLAFYMQSKVITPVHQISQAIKQHDWEAGGKLSLPQQEYAELKAIVDALDNSILQLQEAQQRELNFLRFASHELR TPVAICQSSFEILALQQGELTGATLYASQATNQMKSLIETLLWLTNKECSSLEKENVALSPLLASIIEEQQRVHGHEQKI QLFSDDTYFSVQLHPLKIILSNLLRNSIEHGGADISITQIARCIEITNSYNSNGRHGFGLGLLLVKRLANQLGWIFTCSS ENNLFTARLVISK
Specific function: Member Of The Two-Component Regulatory System Phor/Phob Involved In The Phosphate Regulon Genes Expression. Phor May Function As A Membrane-Associated Protein Kinase That Phosphorylates Phob In Response To Environmental Signals. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 46269; Mature: 46269
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAPKLSLKRSYQVWGVIFLLITLGVNSFIPLCMMCAGMISMHEVTMHNAGQAAEALLKM CCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AEPTQQSLLHQPLLKTDNLTVYPHWRDIPLQIRELSNNEVLTDASKILYEHAEGPIVNAL CCCHHHHHHHCCCCCCCCEEEEECCCCCCHHEEECCCCCCHHHHHHHHHHHCCCCHHHHH SVYYTQAGQPLYVWLQFSVTHDLQFAPKNMTAILLLVLITFCASASLAFYMQSKVITPVH HHHHHCCCCEEEEEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QISQAIKQHDWEAGGKLSLPQQEYAELKAIVDALDNSILQLQEAQQRELNFLRFASHELR HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPVAICQSSFEILALQQGELTGATLYASQATNQMKSLIETLLWLTNKECSSLEKENVALS CHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHH PLLASIIEEQQRVHGHEQKIQLFSDDTYFSVQLHPLKIILSNLLRNSIEHGGADISITQI HHHHHHHHHHHHHCCCHHHEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEHHHH ARCIEITNSYNSNGRHGFGLGLLLVKRLANQLGWIFTCSSENNLFTARLVISK HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEECC >Mature Secondary Structure MQAPKLSLKRSYQVWGVIFLLITLGVNSFIPLCMMCAGMISMHEVTMHNAGQAAEALLKM CCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AEPTQQSLLHQPLLKTDNLTVYPHWRDIPLQIRELSNNEVLTDASKILYEHAEGPIVNAL CCCHHHHHHHCCCCCCCCEEEEECCCCCCHHEEECCCCCCHHHHHHHHHHHCCCCHHHHH SVYYTQAGQPLYVWLQFSVTHDLQFAPKNMTAILLLVLITFCASASLAFYMQSKVITPVH HHHHHCCCCEEEEEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QISQAIKQHDWEAGGKLSLPQQEYAELKAIVDALDNSILQLQEAQQRELNFLRFASHELR HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPVAICQSSFEILALQQGELTGATLYASQATNQMKSLIETLLWLTNKECSSLEKENVALS CHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHH PLLASIIEEQQRVHGHEQKIQLFSDDTYFSVQLHPLKIILSNLLRNSIEHGGADISITQI HHHHHHHHHHHHHCCCHHHEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEHHHH ARCIEITNSYNSNGRHGFGLGLLLVKRLANQLGWIFTCSSENNLFTARLVISK HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA