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The map label for this gene is ifcA [H]

Identifier: 120596951

GI number: 120596951

Start: 144480

End: 146228

Strand: Direct

Name: ifcA [H]

Synonym: Sputw3181_0118

Alternate gene names: 120596951

Gene position: 144480-146228 (Clockwise)

Preceding gene: 120596950

Following gene: 120596952

Centisome position: 3.07

GC content: 42.94

Gene sequence:

>1749_bases
ATGCATTATAAAAAATCCATTATTGGTATTGCTGTCACGGCAACAGCGATTATTGCTGGTTGTCAAGCTACCCATCAAAT
AGTAAAAAGCCAAGGAACTGCTCAAGGCAAACATGGCGAAGTGCAGGTCGAAACCACATTCAAAGATGGGCATATTGTAG
CTATTGATATTATTAAACAAAAAGAAAATAAAGTGCTTGCAGGAGCAGTATTTAAAGATGTTAAACAGGCAATTATTGAT
AATAATTCTGTTGAAGTCGATGGTATTACAGGCGCGACAGTAACGTCTAAAGCGCTTAAAGAAGCTGTGGGTAAAAGTAT
TGAAGCCGCAGGAGTCACTCTTGTTGCAACGGCTTCTGCTAAGAAAAGTGAAGCATTAACGCCTGCAGAATATACCTACG
ATGTGGTGATTATTGGTTCCGGTGGGGCAGGTTTTAGCGCGGGTTTAGAAGCGATAGCCGCAGGCCGCTCCGCCGTTATT
ATTGAAAAAATGCCTATTATCGGTGGTAACTCATTGATTTCTGGTGCAGAGATGAATGTGGCCGGTAGTTGGGTACAAAA
GACTATGGGGATCACCGATAGCAAAGAACTATTTATCAGCGATACGCTTAAAGGCGGTGATTTTAAAGGCGATCCTGAGA
TGGTTAAAACCATGGTTGATAATGCAGTTGATGCCGCGGAGTGGTTAAGAGATTACGTTAAAGTAGAATTTTATCCAGAT
CAGTTATTTCAGTTTGGTGGGCATAGTGTTAAACGGGCATTAATCCCTAAAGGTCATACTGGGGCTGAAGTCATTAGTAA
GTTTTCGATTAAAGCTGATGAAGTCGGTTTACCGATCCATACCAATACTAAGGCTGAAAAGTTAATCCAAGATCAAACGG
GTCGAATTGTTGGTGTAGAAGCGACACATAATGGCAAAACCATCACCTACCATGCTAAGCGCGGTGTTGTGGTTGCAACG
GGCGGCTTCTCCTCGAATATGGAGATGCGCAAGAAATACAATCCAGAACTCGACGAGCGTTATGGTAGTACTGGTCATCC
TGGAGGAACCGGTGATGGTATTGTGATGGCAGAGAAAATTCACGCAGCAGCAAAAAATATGGGATATATCCAGTCATATC
CGATTTGTAGCCCAACCTCTGGTGCGATAGCCTTGATTGCGGACTCTCGCTTTTTTGGTGCCGTGTTAATTAACCAGAAG
GGTGAGCGTTTTGTTGAGGAATTGGAACGTCGTGATGTTATTTCACATGCTATTTTAGACCAACCAGGCCGTTATACTTA
TGTGCTCTGGAATCAAGACATTGAAAACGTTGCTCATACAGTTGAAATGCACCAAGGCGAACTTAAGGAATTCACAAAAG
ATGGGCTAATGTATAAGGTCGATACCCTAGAAGAAGCCGCTAAAGTCTTTAATATTCCTGAAGACACGTTGTTATCAACC
ATTAAAGACGTTAATCGTTATGCCGCAACAGGAAAGGATGAAGCCTTTAATCATCGCTCAGGATTAGTCGATTTAAGTAA
AGGACCTTATTGGATTTTAAAAGCGACACCTTCTGTGCACCATACTATGGGTGGCCTTGTGGTTGATACACGTACTCGTG
TACTTGATGAACAAGGAAAGGTGATTCCGGGCTTGTTTGCTGCGGGTGAGGTGACGGGGTTAACCCATGGAACCAATCGA
CTCGGTGGCAATGCTTATACAGACATTATTGTTTTTGGCCGTATCGCAGGACAAGAAGCGGCTAAATAG

Upstream 100 bases:

>100_bases
AGTTTTAATGGGTTATCAGATTGTTTGAATTTTTAATATATAGAATCTCATTTAATTGGATGTTGTTCTATTTTTTATCA
AGAATAATAAGGGAATTGTA

Downstream 100 bases:

>100_bases
TAATAGTTTGATCCTCTAGCTTAAGCGACCCACTTGGGTCGCTTTTTGCTAATATAGGCGCAACTGATTCATTAATTAAT
CTGCATTTTAGTGTGTTATT

Product: flavocytochrome c

Products: NA

Alternate protein names: Fe(3+)-induced flavocytochrome C3; Ifc3; Iron(III)-induced flavocytochrome C3 [H]

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
MHYKKSIIGIAVTATAIIAGCQATHQIVKSQGTAQGKHGEVQVETTFKDGHIVAIDIIKQKENKVLAGAVFKDVKQAIID
NNSVEVDGITGATVTSKALKEAVGKSIEAAGVTLVATASAKKSEALTPAEYTYDVVIIGSGGAGFSAGLEAIAAGRSAVI
IEKMPIIGGNSLISGAEMNVAGSWVQKTMGITDSKELFISDTLKGGDFKGDPEMVKTMVDNAVDAAEWLRDYVKVEFYPD
QLFQFGGHSVKRALIPKGHTGAEVISKFSIKADEVGLPIHTNTKAEKLIQDQTGRIVGVEATHNGKTITYHAKRGVVVAT
GGFSSNMEMRKKYNPELDERYGSTGHPGGTGDGIVMAEKIHAAAKNMGYIQSYPICSPTSGAIALIADSRFFGAVLINQK
GERFVEELERRDVISHAILDQPGRYTYVLWNQDIENVAHTVEMHQGELKEFTKDGLMYKVDTLEEAAKVFNIPEDTLLST
IKDVNRYAATGKDEAFNHRSGLVDLSKGPYWILKATPSVHHTMGGLVVDTRTRVLDEQGKVIPGLFAAGEVTGLTHGTNR
LGGNAYTDIIVFGRIAGQEAAK

Sequences:

>Translated_582_residues
MHYKKSIIGIAVTATAIIAGCQATHQIVKSQGTAQGKHGEVQVETTFKDGHIVAIDIIKQKENKVLAGAVFKDVKQAIID
NNSVEVDGITGATVTSKALKEAVGKSIEAAGVTLVATASAKKSEALTPAEYTYDVVIIGSGGAGFSAGLEAIAAGRSAVI
IEKMPIIGGNSLISGAEMNVAGSWVQKTMGITDSKELFISDTLKGGDFKGDPEMVKTMVDNAVDAAEWLRDYVKVEFYPD
QLFQFGGHSVKRALIPKGHTGAEVISKFSIKADEVGLPIHTNTKAEKLIQDQTGRIVGVEATHNGKTITYHAKRGVVVAT
GGFSSNMEMRKKYNPELDERYGSTGHPGGTGDGIVMAEKIHAAAKNMGYIQSYPICSPTSGAIALIADSRFFGAVLINQK
GERFVEELERRDVISHAILDQPGRYTYVLWNQDIENVAHTVEMHQGELKEFTKDGLMYKVDTLEEAAKVFNIPEDTLLST
IKDVNRYAATGKDEAFNHRSGLVDLSKGPYWILKATPSVHHTMGGLVVDTRTRVLDEQGKVIPGLFAAGEVTGLTHGTNR
LGGNAYTDIIVFGRIAGQEAAK
>Mature_582_residues
MHYKKSIIGIAVTATAIIAGCQATHQIVKSQGTAQGKHGEVQVETTFKDGHIVAIDIIKQKENKVLAGAVFKDVKQAIID
NNSVEVDGITGATVTSKALKEAVGKSIEAAGVTLVATASAKKSEALTPAEYTYDVVIIGSGGAGFSAGLEAIAAGRSAVI
IEKMPIIGGNSLISGAEMNVAGSWVQKTMGITDSKELFISDTLKGGDFKGDPEMVKTMVDNAVDAAEWLRDYVKVEFYPD
QLFQFGGHSVKRALIPKGHTGAEVISKFSIKADEVGLPIHTNTKAEKLIQDQTGRIVGVEATHNGKTITYHAKRGVVVAT
GGFSSNMEMRKKYNPELDERYGSTGHPGGTGDGIVMAEKIHAAAKNMGYIQSYPICSPTSGAIALIADSRFFGAVLINQK
GERFVEELERRDVISHAILDQPGRYTYVLWNQDIENVAHTVEMHQGELKEFTKDGLMYKVDTLEEAAKVFNIPEDTLLST
IKDVNRYAATGKDEAFNHRSGLVDLSKGPYWILKATPSVHHTMGGLVVDTRTRVLDEQGKVIPGLFAAGEVTGLTHGTNR
LGGNAYTDIIVFGRIAGQEAAK

Specific function: Catalyzes unidirectional fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown [H]

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI156416003, Length=403, Percent_Identity=25.8064516129032, Blast_Score=95, Evalue=2e-19,
Organism=Escherichia coli, GI1788928, Length=484, Percent_Identity=26.8595041322314, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786942, Length=474, Percent_Identity=26.3713080168776, Blast_Score=89, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71986328, Length=471, Percent_Identity=32.0594479830149, Blast_Score=196, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17505833, Length=409, Percent_Identity=27.1393643031785, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17550100, Length=408, Percent_Identity=25.7352941176471, Blast_Score=86, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6320788, Length=478, Percent_Identity=30.7531380753138, Blast_Score=161, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6322511, Length=475, Percent_Identity=28.4210526315789, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6322416, Length=489, Percent_Identity=26.9938650306748, Blast_Score=91, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6322701, Length=487, Percent_Identity=26.4887063655031, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI17137288, Length=489, Percent_Identity=25.9713701431493, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24655642, Length=489, Percent_Identity=25.9713701431493, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24655647, Length=489, Percent_Identity=25.9713701431493, Blast_Score=95, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 62345; Mature: 62345

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYKKSIIGIAVTATAIIAGCQATHQIVKSQGTAQGKHGEVQVETTFKDGHIVAIDIIKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEEEC
KENKVLAGAVFKDVKQAIIDNNSVEVDGITGATVTSKALKEAVGKSIEAAGVTLVATASA
CCCCEEHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCHHCCEEEEEECCC
KKSEALTPAEYTYDVVIIGSGGAGFSAGLEAIAAGRSAVIIEKMPIIGGNSLISGAEMNV
CCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCCCC
AGSWVQKTMGITDSKELFISDTLKGGDFKGDPEMVKTMVDNAVDAAEWLRDYVKVEFYPD
CHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEHH
QLFQFGGHSVKRALIPKGHTGAEVISKFSIKADEVGLPIHTNTKAEKLIQDQTGRIVGVE
HHHHHCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHCCCCEEEEE
ATHNGKTITYHAKRGVVVATGGFSSNMEMRKKYNPELDERYGSTGHPGGTGDGIVMAEKI
EECCCCEEEEEECCCEEEEECCCCCCCHHHHHCCCCHHHHCCCCCCCCCCCCCEEEHHHH
HAAAKNMGYIQSYPICSPTSGAIALIADSRFFGAVLINQKGERFVEELERRDVISHAILD
HHHHHCCCCEECCCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHC
QPGRYTYVLWNQDIENVAHTVEMHQGELKEFTKDGLMYKVDTLEEAAKVFNIPEDTLLST
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCHHHHHHH
IKDVNRYAATGKDEAFNHRSGLVDLSKGPYWILKATPSVHHTMGGLVVDTRTRVLDEQGK
HHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEECCCCHHHHCCCEEEECHHHHHHCCCC
VIPGLFAAGEVTGLTHGTNRLGGNAYTDIIVFGRIAGQEAAK
CCCCEEECCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCCC
>Mature Secondary Structure
MHYKKSIIGIAVTATAIIAGCQATHQIVKSQGTAQGKHGEVQVETTFKDGHIVAIDIIKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEEEC
KENKVLAGAVFKDVKQAIIDNNSVEVDGITGATVTSKALKEAVGKSIEAAGVTLVATASA
CCCCEEHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCHHCCEEEEEECCC
KKSEALTPAEYTYDVVIIGSGGAGFSAGLEAIAAGRSAVIIEKMPIIGGNSLISGAEMNV
CCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCCCC
AGSWVQKTMGITDSKELFISDTLKGGDFKGDPEMVKTMVDNAVDAAEWLRDYVKVEFYPD
CHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEHH
QLFQFGGHSVKRALIPKGHTGAEVISKFSIKADEVGLPIHTNTKAEKLIQDQTGRIVGVE
HHHHHCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHCCCCEEEEE
ATHNGKTITYHAKRGVVVATGGFSSNMEMRKKYNPELDERYGSTGHPGGTGDGIVMAEKI
EECCCCEEEEEECCCEEEEECCCCCCCHHHHHCCCCHHHHCCCCCCCCCCCCCEEEHHHH
HAAAKNMGYIQSYPICSPTSGAIALIADSRFFGAVLINQKGERFVEELERRDVISHAILD
HHHHHCCCCEECCCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHC
QPGRYTYVLWNQDIENVAHTVEMHQGELKEFTKDGLMYKVDTLEEAAKVFNIPEDTLLST
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCHHHHHHH
IKDVNRYAATGKDEAFNHRSGLVDLSKGPYWILKATPSVHHTMGGLVVDTRTRVLDEQGK
HHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEECCCCHHHHCCCEEEECHHHHHHCCCC
VIPGLFAAGEVTGLTHGTNRLGGNAYTDIIVFGRIAGQEAAK
CCCCEEECCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10455032; 10581549 [H]