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The map label for this gene is opsX [H]

Identifier: 120596887

GI number: 120596887

Start: 67829

End: 68872

Strand: Direct

Name: opsX [H]

Synonym: Sputw3181_0054

Alternate gene names: 120596887

Gene position: 67829-68872 (Clockwise)

Preceding gene: 120596885

Following gene: 120596888

Centisome position: 1.44

GC content: 46.46

Gene sequence:

>1044_bases
ATGAGTTTAAATCCAAATAGCATGAATTCACTCTGTCTGCTTCGGCTATCTGCTATCGGTGACGTATGCCATGCCGTGGC
TATGGTGCAGGCGATTCAACGGCAATACCCCGAACTCAATATTACTTGGGTGATAGGCAAGCTTGAATATCAATTGCTAA
AACATTTACCCGGTATTGAGTTTGTTATTTTTGATAAATCCCAAGGATGGCGCAGTTATTTTAATTTGCGCAAAGCCCTA
AAAGGGCGACATTTTGATGTGCTACTGCATATGCAAGTGGCGCTGCGTGCGACCTTGGCTTCGGTGGCTATTTCGGCAAA
AGTGCGCATAGGTTTTGACCGTGCTCGCGCTAAAGAAGGCCAGTGGCTGGTGACTAACCATAGGGTTGAGCCCTTGGCTA
AGCCCCATGTGCTTGAAGGTTTTATGGGATTTGCAAAGGCAATAGGTGTTAAAGATCTTACTCCGCAGTGGAATATCCCT
GTGCCAATTGCCGACACCGAGTTTGCGCAAATGCACATTAAAGACAATGAAAGAGTCTTTATGATTTGCGCCGCAGCCAG
TAAGGCGGAACGCAATTGGTTACCTGAGCGCTATGCTGCTGTGGCGAGTCATGCGATTTCTAAAGGTTTTAGGGTCATCC
TTTGTGGTGGCCCGACTCAACTTGAAAAGGACTTAGCCGAGCAAATCTTGTTAGCTTGCCCTTCAAAAATCGATAATTTA
GTGGGTAAAACCAGTCTGACTCAATTATTGGCACTGTTAAAACGTTCAAGCTTAGTATTAGCGCCAGATACGGGGCCTGC
TCATATGGCAGTAACTCAAGGCACGCCTGTGATAGGTTTATATGCCCATTCAAACCCGGGGCGTACCGGGCCTTATTTAT
CACAGCAATATGTGGTTAGTGTCTATGAAGAGGCAATTGCATCCCAGCATCGCGACGAGGTGAAGTGGGGAACCCGTGCG
AAAGGCCAGAACTTGATGGTATTGATTAGTGTTGAAGCCGTAATTGAGAAGTTTGAACTTGTGGTTGAGCAGGCACTCAG
ATAA

Upstream 100 bases:

>100_bases
ATCGGAGATTTGTTGACTTAAGCGTGGCACCTAGGGGCATTCTACATTAAGATCGTTGGCTTGCGCCAAATAACCTAAAA
AGCCATGAGCTTCAATCCCA

Downstream 100 bases:

>100_bases
GACATGTTAGTGTAGTGCATTCTTCAGCACTCTAGATGTATCGCTGCATTAGCGGTTGGTATTTAGAATATCGTTTAGGA
GATAAATCATGCGGATAGCC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSLNPNSMNSLCLLRLSAIGDVCHAVAMVQAIQRQYPELNITWVIGKLEYQLLKHLPGIEFVIFDKSQGWRSYFNLRKAL
KGRHFDVLLHMQVALRATLASVAISAKVRIGFDRARAKEGQWLVTNHRVEPLAKPHVLEGFMGFAKAIGVKDLTPQWNIP
VPIADTEFAQMHIKDNERVFMICAAASKAERNWLPERYAAVASHAISKGFRVILCGGPTQLEKDLAEQILLACPSKIDNL
VGKTSLTQLLALLKRSSLVLAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYLSQQYVVSVYEEAIASQHRDEVKWGTRA
KGQNLMVLISVEAVIEKFELVVEQALR

Sequences:

>Translated_347_residues
MSLNPNSMNSLCLLRLSAIGDVCHAVAMVQAIQRQYPELNITWVIGKLEYQLLKHLPGIEFVIFDKSQGWRSYFNLRKAL
KGRHFDVLLHMQVALRATLASVAISAKVRIGFDRARAKEGQWLVTNHRVEPLAKPHVLEGFMGFAKAIGVKDLTPQWNIP
VPIADTEFAQMHIKDNERVFMICAAASKAERNWLPERYAAVASHAISKGFRVILCGGPTQLEKDLAEQILLACPSKIDNL
VGKTSLTQLLALLKRSSLVLAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYLSQQYVVSVYEEAIASQHRDEVKWGTRA
KGQNLMVLISVEAVIEKFELVVEQALR
>Mature_346_residues
SLNPNSMNSLCLLRLSAIGDVCHAVAMVQAIQRQYPELNITWVIGKLEYQLLKHLPGIEFVIFDKSQGWRSYFNLRKALK
GRHFDVLLHMQVALRATLASVAISAKVRIGFDRARAKEGQWLVTNHRVEPLAKPHVLEGFMGFAKAIGVKDLTPQWNIPV
PIADTEFAQMHIKDNERVFMICAAASKAERNWLPERYAAVASHAISKGFRVILCGGPTQLEKDLAEQILLACPSKIDNLV
GKTSLTQLLALLKRSSLVLAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYLSQQYVVSVYEEAIASQHRDEVKWGTRAK
GQNLMVLISVEAVIEKFELVVEQALR

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=280, Percent_Identity=21.4285714285714, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790051, Length=343, Percent_Identity=23.6151603498542, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38505; Mature: 38374

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNPNSMNSLCLLRLSAIGDVCHAVAMVQAIQRQYPELNITWVIGKLEYQLLKHLPGIE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCCE
FVIFDKSQGWRSYFNLRKALKGRHFDVLLHMQVALRATLASVAISAKVRIGFDRARAKEG
EEEEECCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHEEEEEECCHHHHCCCC
QWLVTNHRVEPLAKPHVLEGFMGFAKAIGVKDLTPQWNIPVPIADTEFAQMHIKDNERVF
CEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEE
MICAAASKAERNWLPERYAAVASHAISKGFRVILCGGPTQLEKDLAEQILLACPSKIDNL
EEEECCCHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHH
VGKTSLTQLLALLKRSSLVLAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYLSQQYVVS
HCHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHH
VYEEAIASQHRDEVKWGTRAKGQNLMVLISVEAVIEKFELVVEQALR
HHHHHHHHCCHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLNPNSMNSLCLLRLSAIGDVCHAVAMVQAIQRQYPELNITWVIGKLEYQLLKHLPGIE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCCE
FVIFDKSQGWRSYFNLRKALKGRHFDVLLHMQVALRATLASVAISAKVRIGFDRARAKEG
EEEEECCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHEEEEEECCHHHHCCCC
QWLVTNHRVEPLAKPHVLEGFMGFAKAIGVKDLTPQWNIPVPIADTEFAQMHIKDNERVF
CEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEE
MICAAASKAERNWLPERYAAVASHAISKGFRVILCGGPTQLEKDLAEQILLACPSKIDNL
EEEECCCHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHH
VGKTSLTQLLALLKRSSLVLAPDTGPAHMAVTQGTPVIGLYAHSNPGRTGPYLSQQYVVS
HCHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHH
VYEEAIASQHRDEVKWGTRAKGQNLMVLISVEAVIEKFELVVEQALR
HHHHHHHHCCHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]