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The map label for this gene is 119946952

Identifier: 119946952

GI number: 119946952

Start: 4135026

End: 4135877

Strand: Direct

Name: 119946952

Synonym: Ping_3346

Alternate gene names: NA

Gene position: 4135026-4135877 (Clockwise)

Preceding gene: 119946951

Following gene: 119946957

Centisome position: 90.69

GC content: 41.43

Gene sequence:

>852_bases
ATGAAAATAATTAGCTCTTATTTCCCTTTTCTTATTATCAGCCTTGTTTTCTATGGTTTTATTTTTCTTTATCTTGATCA
ACCCAAGCGCATTACAACACTGCCGCTAAATTCCGGCGAGCAATCGGTTCAAGTCCAGTTTATTTCCCAACCTAACAAAG
GACAGAATCCAGCAGAAGATAAACTAGCAGCACCAACCGAGCAGAAAATAGTAGAGGCGAAATCCTACGTTACAGAAGAA
GAAGTCGTAGAAAGAGCAAAAGTTAAGTCAAAAAAAGTAATAAAATACAGTGCAAAAAGCTTAATACTTTCTGAATCAGA
AATTAAATTAAGAAAGCAGGCATTGCTGGAAAGCTTTGCAACAGCCGGTACCGATAATGTGGCGAAGTTAAAAGCAGAGA
TTTTTCTCGAGCAACTTGCAACGGAGAAAATATTAACCAACGAAACAGAGCAACTGAGCAAAACAAAAGACCAAGCCTCT
TCACCACAAACGAGCAACGGTCCAGCAAAGAAGGCGGTTATAAAAAAATCCCCCTCAGAAAACAGCTCATCACTGGCCAG
TAGCACAAAAAATCAAGGCGTATTGCAGGAAGCCATTGTCGTTTCCGGTCGCAAACCTGTCTACCCGCAACGCGCCATTT
TGCGTAACCAGCAAGGCCGAGTAGTCATAAAATTAACCATCACCAAAAAAGGTCTGCCCAAAAACCCTAAAATACTAACT
TCTAGCGGATTCCCCCTTTTGGATGATGCGGTGCTGGCTTTTGTTGACCAGGAATTATTTATGCCCGCGCTGCAAGGCGA
AGATCAAGTGATGTCAGAGCAACTTTTCGCTTTTCGTTTTGAGCTTAATTAG

Upstream 100 bases:

>100_bases
TTTAGGTGTCGCCTTATCAATTTTGGATAAACTACGCTTGTCCGGATTCCATCATGTTGCTTTTGCAACCGACAAAGACC
AATGAAAGTGACGGTGGTGC

Downstream 100 bases:

>100_bases
TCCATAACAATCACAGTCGGGTTATTGAGACTTCGAAGTAAGGTCAAAATATTTTCAATATCCGCAACAACGATCAAATA
TCAATCAATCCTCCCCATTA

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKIISSYFPFLIISLVFYGFIFLYLDQPKRITTLPLNSGEQSVQVQFISQPNKGQNPAEDKLAAPTEQKIVEAKSYVTEE
EVVERAKVKSKKVIKYSAKSLILSESEIKLRKQALLESFATAGTDNVAKLKAEIFLEQLATEKILTNETEQLSKTKDQAS
SPQTSNGPAKKAVIKKSPSENSSSLASSTKNQGVLQEAIVVSGRKPVYPQRAILRNQQGRVVIKLTITKKGLPKNPKILT
SSGFPLLDDAVLAFVDQELFMPALQGEDQVMSEQLFAFRFELN

Sequences:

>Translated_283_residues
MKIISSYFPFLIISLVFYGFIFLYLDQPKRITTLPLNSGEQSVQVQFISQPNKGQNPAEDKLAAPTEQKIVEAKSYVTEE
EVVERAKVKSKKVIKYSAKSLILSESEIKLRKQALLESFATAGTDNVAKLKAEIFLEQLATEKILTNETEQLSKTKDQAS
SPQTSNGPAKKAVIKKSPSENSSSLASSTKNQGVLQEAIVVSGRKPVYPQRAILRNQQGRVVIKLTITKKGLPKNPKILT
SSGFPLLDDAVLAFVDQELFMPALQGEDQVMSEQLFAFRFELN
>Mature_283_residues
MKIISSYFPFLIISLVFYGFIFLYLDQPKRITTLPLNSGEQSVQVQFISQPNKGQNPAEDKLAAPTEQKIVEAKSYVTEE
EVVERAKVKSKKVIKYSAKSLILSESEIKLRKQALLESFATAGTDNVAKLKAEIFLEQLATEKILTNETEQLSKTKDQAS
SPQTSNGPAKKAVIKKSPSENSSSLASSTKNQGVLQEAIVVSGRKPVYPQRAILRNQQGRVVIKLTITKKGLPKNPKILT
SSGFPLLDDAVLAFVDQELFMPALQGEDQVMSEQLFAFRFELN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31384; Mature: 31384

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIISSYFPFLIISLVFYGFIFLYLDQPKRITTLPLNSGEQSVQVQFISQPNKGQNPAED
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCHH
KLAAPTEQKIVEAKSYVTEEEVVERAKVKSKKVIKYSAKSLILSESEIKLRKQALLESFA
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TAGTDNVAKLKAEIFLEQLATEKILTNETEQLSKTKDQASSPQTSNGPAKKAVIKKSPSE
HCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCC
NSSSLASSTKNQGVLQEAIVVSGRKPVYPQRAILRNQQGRVVIKLTITKKGLPKNPKILT
CHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCCEEE
SSGFPLLDDAVLAFVDQELFMPALQGEDQVMSEQLFAFRFELN
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECC
>Mature Secondary Structure
MKIISSYFPFLIISLVFYGFIFLYLDQPKRITTLPLNSGEQSVQVQFISQPNKGQNPAED
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCHH
KLAAPTEQKIVEAKSYVTEEEVVERAKVKSKKVIKYSAKSLILSESEIKLRKQALLESFA
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
TAGTDNVAKLKAEIFLEQLATEKILTNETEQLSKTKDQASSPQTSNGPAKKAVIKKSPSE
HCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCC
NSSSLASSTKNQGVLQEAIVVSGRKPVYPQRAILRNQQGRVVIKLTITKKGLPKNPKILT
CHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCCEEE
SSGFPLLDDAVLAFVDQELFMPALQGEDQVMSEQLFAFRFELN
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA