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The map label for this gene is dsbE [H]

Identifier: 119946639

GI number: 119946639

Start: 3717754

End: 3718290

Strand: Reverse

Name: dsbE [H]

Synonym: Ping_3018

Alternate gene names: 119946639

Gene position: 3718290-3717754 (Counterclockwise)

Preceding gene: 119946640

Following gene: 119946638

Centisome position: 81.55

GC content: 40.41

Gene sequence:

>537_bases
ATGGCCAATAGCAAAAAAATACTGACGCTATCAGTCCCTTTAGCGATCTTTTTGATTGCTTGTTATTTCCTGTTTCAAGG
TTTGTACACTGATCCTCGAAAACTCGAGTCCACTTTAATTGGTCAAACTGTCCCGGAGTTTACTCTGCAGGATCTTTATG
ACCCGGACAAGCAGCACGATGCCTCTATATTTAAAGGTCAAAAATTATTACTTAATGTCTGGGCTACCTGGTGCCCAACC
TGTTATGCCGAGCATCAATTTTTAACTAAGTTGGCCGGGGAGGGGCTGTATATTATTGGTATGGACTACAAAGATAATCG
TATTAAAGCGATTAAGTGGTTAACGGATCTTAAGGATCCCTATGCAATCAGTCTGTTTGATAAAGATGGTATGCTGGGGC
TTGATTTGGGTGTTTATGGTGCGCCTGAAACCTTCTTTATTGATAGCAAAGGTATCATCCAGTATCGCCATGTCGGGGAT
TTAAATGACCGCAATTGGCAAGATAAATTATCTGCTATCTTTGATAATATGGAGTAA

Upstream 100 bases:

>100_bases
TTGGTCCGATGATGATGGCATTGGCGGGTGTTTTGGTGATCTTTGATCGCCGCTACCGGGTCAAAAAAGTGCCCGAATCA
GCAGCGGAGGTTATCTGAAA

Downstream 100 bases:

>100_bases
CCGATGCAATTGACTTCAGTAGATCTACATGTTCAAAATAATCGCTTTAAAACAGTTAATTTCAGCGCTTATCTGTTTTG
TCTCATGTTTTTTTTCAGCC

Product: periplasmic protein thiol--disulphide oxidoreductase DsbE

Products: NA

Alternate protein names: Cytochrome c biogenesis protein CcmG [H]

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MANSKKILTLSVPLAIFLIACYFLFQGLYTDPRKLESTLIGQTVPEFTLQDLYDPDKQHDASIFKGQKLLLNVWATWCPT
CYAEHQFLTKLAGEGLYIIGMDYKDNRIKAIKWLTDLKDPYAISLFDKDGMLGLDLGVYGAPETFFIDSKGIIQYRHVGD
LNDRNWQDKLSAIFDNME

Sequences:

>Translated_178_residues
MANSKKILTLSVPLAIFLIACYFLFQGLYTDPRKLESTLIGQTVPEFTLQDLYDPDKQHDASIFKGQKLLLNVWATWCPT
CYAEHQFLTKLAGEGLYIIGMDYKDNRIKAIKWLTDLKDPYAISLFDKDGMLGLDLGVYGAPETFFIDSKGIIQYRHVGD
LNDRNWQDKLSAIFDNME
>Mature_177_residues
ANSKKILTLSVPLAIFLIACYFLFQGLYTDPRKLESTLIGQTVPEFTLQDLYDPDKQHDASIFKGQKLLLNVWATWCPTC
YAEHQFLTKLAGEGLYIIGMDYKDNRIKAIKWLTDLKDPYAISLFDKDGMLGLDLGVYGAPETFFIDSKGIIQYRHVGDL
NDRNWQDKLSAIFDNME

Specific function: Involved in disulfide bond formation. Catalyzes a late, reductive step in the assembly of periplasmic c-type cytochromes, probably the reduction of disulfide bonds of the apocytochrome c to allow covalent linkage with the heme. Possible subunit of a heme

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788523, Length=173, Percent_Identity=54.9132947976879, Blast_Score=198, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004799
- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: NA

Molecular weight: Translated: 20372; Mature: 20241

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSKKILTLSVPLAIFLIACYFLFQGLYTDPRKLESTLIGQTVPEFTLQDLYDPDKQHD
CCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
ASIFKGQKLLLNVWATWCPTCYAEHQFLTKLAGEGLYIIGMDYKDNRIKAIKWLTDLKDP
HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCC
YAISLFDKDGMLGLDLGVYGAPETFFIDSKGIIQYRHVGDLNDRNWQDKLSAIFDNME
EEEEEECCCCCEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
ANSKKILTLSVPLAIFLIACYFLFQGLYTDPRKLESTLIGQTVPEFTLQDLYDPDKQHD
CCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
ASIFKGQKLLLNVWATWCPTCYAEHQFLTKLAGEGLYIIGMDYKDNRIKAIKWLTDLKDP
HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCC
YAISLFDKDGMLGLDLGVYGAPETFFIDSKGIIQYRHVGDLNDRNWQDKLSAIFDNME
EEEEEECCCCCEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]