| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is cysZ [H]
Identifier: 119945997
GI number: 119945997
Start: 2844077
End: 2844868
Strand: Direct
Name: cysZ [H]
Synonym: Ping_2339
Alternate gene names: 119945997
Gene position: 2844077-2844868 (Clockwise)
Preceding gene: 119945993
Following gene: 119946004
Centisome position: 62.38
GC content: 38.38
Gene sequence:
>792_bases ATGATCCAAAACCAACTTATAACACAGCCCCTTTCGGGTGCAGGTTATCTCCTTAAAGGCGCAAAACTTATCAGCCATCC CAAATTGCGGATTTTTGTATTGATACCGTTAATCATTAATATACTTATTTTTGCCGCTGCCTTTTGGTTTCTGTTTAGTT CTATAACACAATGGATAGACAGTTATATGGCAGCTCTACCGGCATTTTTAAGCTGGTTAAATTATCTTTTATGGCCTATT TTAGTCCTGACCATTTTGTTCGCTTTTACCTTTATTTTTTCTGCGGTCGCTAATTTAATCGCCGCCCCTTTTAATGGTTT ATTGGCAGAAAAAACTGAAATAATATTAACCAATCAGCCATTAGATGATCCAGGTTTGTCTGACCTGATTAAAGATTTAC CGCGTATATTTAAACGAGAGTTACAAAAACTGGCTTACTTCTTGCCGAGAATGTTGTTCTGCGGTCTATTATTTTTTATT CCGGGTTTTGGACAAATAGTTGCCCCCTTTATCTGGTTTGTATTTGCAGGTTGGATGATGGCCATACAGTATGCTGATTT CCCCTTCGATAATCATAAAATTCCTTTTGCGACCATGAAACAGGCATTAAGGAAACGTTTAGGCAAAAATTTAACGTTCG GGATGCTGGTGAGTTTCTTTACGACTCTCCCTATTATAAACTTTATCATTATGCCGATTGCGGTGTGCGGCGCGACGGCT TTTTGGGTGGATGTCTATAAACAAGAATCACTAAACTCCCTCACTTCACCAGAAATCTCGGTTAATGATTAA
Upstream 100 bases:
>100_bases TCTACTATTGCCTATATTTTTTTATAAAACTGCTACACGTTTATACAAAGCCCATATTTTTCGTTAGACTCCTGTTTTTG ATAAATTTAAAGAGTAAATT
Downstream 100 bases:
>100_bases GTGAAAACAGAGAAAAGCTTATGTACAGAGCGTTAGCAAAAGAACAAGTAGCCCTTGCTGTCAAGCTTAAAACTGCCAGC AGATACTAGAGAGGCAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MIQNQLITQPLSGAGYLLKGAKLISHPKLRIFVLIPLIINILIFAAAFWFLFSSITQWIDSYMAALPAFLSWLNYLLWPI LVLTILFAFTFIFSAVANLIAAPFNGLLAEKTEIILTNQPLDDPGLSDLIKDLPRIFKRELQKLAYFLPRMLFCGLLFFI PGFGQIVAPFIWFVFAGWMMAIQYADFPFDNHKIPFATMKQALRKRLGKNLTFGMLVSFFTTLPIINFIIMPIAVCGATA FWVDVYKQESLNSLTSPEISVND
Sequences:
>Translated_263_residues MIQNQLITQPLSGAGYLLKGAKLISHPKLRIFVLIPLIINILIFAAAFWFLFSSITQWIDSYMAALPAFLSWLNYLLWPI LVLTILFAFTFIFSAVANLIAAPFNGLLAEKTEIILTNQPLDDPGLSDLIKDLPRIFKRELQKLAYFLPRMLFCGLLFFI PGFGQIVAPFIWFVFAGWMMAIQYADFPFDNHKIPFATMKQALRKRLGKNLTFGMLVSFFTTLPIINFIIMPIAVCGATA FWVDVYKQESLNSLTSPEISVND >Mature_263_residues MIQNQLITQPLSGAGYLLKGAKLISHPKLRIFVLIPLIINILIFAAAFWFLFSSITQWIDSYMAALPAFLSWLNYLLWPI LVLTILFAFTFIFSAVANLIAAPFNGLLAEKTEIILTNQPLDDPGLSDLIKDLPRIFKRELQKLAYFLPRMLFCGLLFFI PGFGQIVAPFIWFVFAGWMMAIQYADFPFDNHKIPFATMKQALRKRLGKNLTFGMLVSFFTTLPIINFIIMPIAVCGATA FWVDVYKQESLNSLTSPEISVND
Specific function: Possibly involved in sulfate transport [H]
COG id: COG2981
COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CysZ family [H]
Homologues:
Organism=Escherichia coli, GI1788753, Length=247, Percent_Identity=51.417004048583, Blast_Score=277, Evalue=5e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022985 - InterPro: IPR007496 [H]
Pfam domain/function: PF04401 DUF540 [H]
EC number: NA
Molecular weight: Translated: 29831; Mature: 29831
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQNQLITQPLSGAGYLLKGAKLISHPKLRIFVLIPLIINILIFAAAFWFLFSSITQWID CCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYMAALPAFLSWLNYLLWPILVLTILFAFTFIFSAVANLIAAPFNGLLAEKTEIILTNQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEECCC LDDPGLSDLIKDLPRIFKRELQKLAYFLPRMLFCGLLFFIPGFGQIVAPFIWFVFAGWMM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AIQYADFPFDNHKIPFATMKQALRKRLGKNLTFGMLVSFFTTLPIINFIIMPIAVCGATA HHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWVDVYKQESLNSLTSPEISVND HHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIQNQLITQPLSGAGYLLKGAKLISHPKLRIFVLIPLIINILIFAAAFWFLFSSITQWID CCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYMAALPAFLSWLNYLLWPILVLTILFAFTFIFSAVANLIAAPFNGLLAEKTEIILTNQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEECCC LDDPGLSDLIKDLPRIFKRELQKLAYFLPRMLFCGLLFFIPGFGQIVAPFIWFVFAGWMM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AIQYADFPFDNHKIPFATMKQALRKRLGKNLTFGMLVSFFTTLPIINFIIMPIAVCGATA HHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWVDVYKQESLNSLTSPEISVND HHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA