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The map label for this gene is recR

Identifier: 119945932

GI number: 119945932

Start: 2761071

End: 2761670

Strand: Reverse

Name: recR

Synonym: Ping_2272

Alternate gene names: 119945932

Gene position: 2761670-2761071 (Counterclockwise)

Preceding gene: 119945933

Following gene: 119945927

Centisome position: 60.57

GC content: 43.83

Gene sequence:

>600_bases
ATGAGTTCCAGTTCTTTACTTGAAGATCTAATGCAGGCATTACAGTGCTTGCCCAGTGTCGGTCCAAAATCTGCGCAGCG
GATGGTTTATCATCTGCTGGATAAAAATAGAAAGGGGGCTTTAAACCTGAGTTCTCTGCTTGAAAGAGCCGTTAATGAAA
TAGGTCACTGCCAACAATGCCGTACTTTTACCGAGCAGAATTTATGTGCTATCTGTGACAATGATAAACGTAATAAAAAC
GGCATGATTTGTGTTGTTGAAATGCCCGTTGATGTGTTGGCGATTGAACAAACGGCTTTGTTTTCAGGTACCTATTTTGT
GCTGATGGGGCATCTTTCCCCCCTTGATGGCGTTGGACCGGAGCAGCTTGGTTTAAACCTCCTTGATAAACAACTTTCAT
CAGGTCAACATTCTGAAGTTATATTAGCGACAAATCCAACAGTTGAGGGTGAAGCGACGGCTTATTATATTGCCGAGATG
GCCAAGCGATATGCTATAAAAGTGAGTCGAATCGCACACGGTGTGCCAGTGGGAGGCGAGCTGGAGTATGTCGACAGCAC
CACACTTTCTCATTCATTTTCTGGACGATCTGTTTTTTAA

Upstream 100 bases:

>100_bases
GTGATTTTATTGCCTTGCTAAGATAACAGTTAAATATATTTAAGAAGGTAATTAAGGTAAAATCTCCTCCTCTACTTAAT
AATAAGAAGCAGCCTTAGAT

Downstream 100 bases:

>100_bases
CCTATCCATTGTTTAATCTAGGCAGTAAAAAGGGCGGATAACCGCCCTTAAATAATTAGCTCGTCAAGCTTTTATAATCA
CTTTTTCTTTTGCCCTGCAA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSSSSLLEDLMQALQCLPSVGPKSAQRMVYHLLDKNRKGALNLSSLLERAVNEIGHCQQCRTFTEQNLCAICDNDKRNKN
GMICVVEMPVDVLAIEQTALFSGTYFVLMGHLSPLDGVGPEQLGLNLLDKQLSSGQHSEVILATNPTVEGEATAYYIAEM
AKRYAIKVSRIAHGVPVGGELEYVDSTTLSHSFSGRSVF

Sequences:

>Translated_199_residues
MSSSSLLEDLMQALQCLPSVGPKSAQRMVYHLLDKNRKGALNLSSLLERAVNEIGHCQQCRTFTEQNLCAICDNDKRNKN
GMICVVEMPVDVLAIEQTALFSGTYFVLMGHLSPLDGVGPEQLGLNLLDKQLSSGQHSEVILATNPTVEGEATAYYIAEM
AKRYAIKVSRIAHGVPVGGELEYVDSTTLSHSFSGRSVF
>Mature_198_residues
SSSSLLEDLMQALQCLPSVGPKSAQRMVYHLLDKNRKGALNLSSLLERAVNEIGHCQQCRTFTEQNLCAICDNDKRNKNG
MICVVEMPVDVLAIEQTALFSGTYFVLMGHLSPLDGVGPEQLGLNLLDKQLSSGQHSEVILATNPTVEGEATAYYIAEMA
KRYAIKVSRIAHGVPVGGELEYVDSTTLSHSFSGRSVF

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=196, Percent_Identity=64.2857142857143, Blast_Score=273, Evalue=5e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_PSYIN (A1SWZ8)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_943612.1
- ProteinModelPortal:   A1SWZ8
- SMR:   A1SWZ8
- STRING:   A1SWZ8
- GeneID:   4626801
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_2272
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   A1SWZ8
- BioCyc:   PING357804:PING_2272-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21691; Mature: 21560

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSSLLEDLMQALQCLPSVGPKSAQRMVYHLLDKNRKGALNLSSLLERAVNEIGHCQQC
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
RTFTEQNLCAICDNDKRNKNGMICVVEMPVDVLAIEQTALFSGTYFVLMGHLSPLDGVGP
HHHHHCCEEEEECCCCCCCCCEEEEEECCCCEEEEHHHHHHCCCEEEEEECCCCCCCCCH
EQLGLNLLDKQLSSGQHSEVILATNPTVEGEATAYYIAEMAKRYAIKVSRIAHGVPVGGE
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LEYVDSTTLSHSFSGRSVF
EEECCCCHHHCCCCCCCCC
>Mature Secondary Structure 
SSSSLLEDLMQALQCLPSVGPKSAQRMVYHLLDKNRKGALNLSSLLERAVNEIGHCQQC
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
RTFTEQNLCAICDNDKRNKNGMICVVEMPVDVLAIEQTALFSGTYFVLMGHLSPLDGVGP
HHHHHCCEEEEECCCCCCCCCEEEEEECCCCEEEEHHHHHHCCCEEEEEECCCCCCCCCH
EQLGLNLLDKQLSSGQHSEVILATNPTVEGEATAYYIAEMAKRYAIKVSRIAHGVPVGGE
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LEYVDSTTLSHSFSGRSVF
EEECCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA