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The map label for this gene is ndpA [C]

Identifier: 119945927

GI number: 119945927

Start: 2752422

End: 2753477

Strand: Reverse

Name: ndpA [C]

Synonym: Ping_2267

Alternate gene names: 119945927

Gene position: 2753477-2752422 (Counterclockwise)

Preceding gene: 119945932

Following gene: 119945926

Centisome position: 60.39

GC content: 38.54

Gene sequence:

>1056_bases
ATGAACATCTCTGCCAGTAATATTATTTTACATTCTTTATCCTACAACCCTGAAGGGATTTTACAATGTAAAATGCGTGA
AGGGGAGTTACCTATTTCAGCTTCTATCGATGAATTTTTAACCAAACTGCATCGTACTTACCAAAGTAAAACGAATAAAG
CCTTTGCTTCTTTTGGAGATAAAACTGATAAATCACCTCTGTTTAGAGAGGCGTTGACGGATTATATGTCTCAACAGCTC
GATTTTGTGAGATTTTCACAAAAAACCGCCAGTTGTTTAGTTGAAGAGTTGCAAAAGCATGATTTTGCGGAAGAGGGGAT
TCTATTAATCAGCAAATACAGTTGGACAGCAAGTGATTATTTATTTATTGCATTACTGCAAAATAATCACTCAGTCAGTG
TTAATGAAAATCTTGAGTTGCAGGAGAGTCAGCATATTGAAACCAGCAAAATACAACTTGTCGCACGTATTGATTTAACC
TTATTGGCGCGGGATCCGCAGTCAAATCGTTACATCTCATTTATTAAAGGTCGTGCCGGGCGTAAAGTTTCTGATTTTTT
CCTGGATTTTATGGGCGCACAGGAAGGTTTTGATGCAAAAGAGCAAAATCAGGGGCTAATGAAGGCCGTTGATGAATTTT
GCGAAAATCAGGCCTTACCCGTTGCGAAGAAAAAAGAAGTACGTGAAGTTGCCTTTGAATATTGTAATGAACAGTTAAAA
CAGGGGGATGATATTGAACTTTCCGTGTTATCAGAACAACTTCAGGACTCACCAAAACTTGAGGGTAGTTTTTACGACTT
TGTGAGTGAAGATTATCAATTAGAAAACAGTTTTCCCGTCGACCGTAGTGTGGTTAGAAAGCTGACCAAATATGTTGGGC
AAGGGGGGGGGATAAGCATTAGTTTTGATCAAAAACACCTTGGGGAACGCATATTTTATGATGCGAATAGCGATACATTA
ACTATCCAGGGGATCCCCCCTAATTTACGCGAACAGTTAAAACGTGATAACTTTGCCGATGATAATCAAAAGGATGATCA
AAACCCGCCATTTTAA

Upstream 100 bases:

>100_bases
TTGTTTTTATTTTTATACAGTGAATAGAAATTATAGACTATTTATTCATTCACTCTGTATAATTTACGGTTATCTCTTTA
TTAATATGGTGCAAAAATTT

Downstream 100 bases:

>100_bases
CAAAGCGCTTTGTTGTATTGTTACAATAATATTAACGAAAATAGGCATAAAGTCGGCAAGAAAATACAGATTTTGATTGT
CGTTTATTGAATGAGGATAG

Product: 37kDa nucleoid-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MNISASNIILHSLSYNPEGILQCKMREGELPISASIDEFLTKLHRTYQSKTNKAFASFGDKTDKSPLFREALTDYMSQQL
DFVRFSQKTASCLVEELQKHDFAEEGILLISKYSWTASDYLFIALLQNNHSVSVNENLELQESQHIETSKIQLVARIDLT
LLARDPQSNRYISFIKGRAGRKVSDFFLDFMGAQEGFDAKEQNQGLMKAVDEFCENQALPVAKKKEVREVAFEYCNEQLK
QGDDIELSVLSEQLQDSPKLEGSFYDFVSEDYQLENSFPVDRSVVRKLTKYVGQGGGISISFDQKHLGERIFYDANSDTL
TIQGIPPNLREQLKRDNFADDNQKDDQNPPF

Sequences:

>Translated_351_residues
MNISASNIILHSLSYNPEGILQCKMREGELPISASIDEFLTKLHRTYQSKTNKAFASFGDKTDKSPLFREALTDYMSQQL
DFVRFSQKTASCLVEELQKHDFAEEGILLISKYSWTASDYLFIALLQNNHSVSVNENLELQESQHIETSKIQLVARIDLT
LLARDPQSNRYISFIKGRAGRKVSDFFLDFMGAQEGFDAKEQNQGLMKAVDEFCENQALPVAKKKEVREVAFEYCNEQLK
QGDDIELSVLSEQLQDSPKLEGSFYDFVSEDYQLENSFPVDRSVVRKLTKYVGQGGGISISFDQKHLGERIFYDANSDTL
TIQGIPPNLREQLKRDNFADDNQKDDQNPPF
>Mature_351_residues
MNISASNIILHSLSYNPEGILQCKMREGELPISASIDEFLTKLHRTYQSKTNKAFASFGDKTDKSPLFREALTDYMSQQL
DFVRFSQKTASCLVEELQKHDFAEEGILLISKYSWTASDYLFIALLQNNHSVSVNENLELQESQHIETSKIQLVARIDLT
LLARDPQSNRYISFIKGRAGRKVSDFFLDFMGAQEGFDAKEQNQGLMKAVDEFCENQALPVAKKKEVREVAFEYCNEQLK
QGDDIELSVLSEQLQDSPKLEGSFYDFVSEDYQLENSFPVDRSVVRKLTKYVGQGGGISISFDQKHLGERIFYDANSDTL
TIQGIPPNLREQLKRDNFADDNQKDDQNPPF

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family [H]

Homologues:

Organism=Escherichia coli, GI1788513, Length=338, Percent_Identity=43.1952662721894, Blast_Score=285, Evalue=3e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007358 [H]

Pfam domain/function: PF04245 NA37 [H]

EC number: NA

Molecular weight: Translated: 40038; Mature: 40038

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISASNIILHSLSYNPEGILQCKMREGELPISASIDEFLTKLHRTYQSKTNKAFASFGD
CCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
KTDKSPLFREALTDYMSQQLDFVRFSQKTASCLVEELQKHDFAEEGILLISKYSWTASDY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCE
LFIALLQNNHSVSVNENLELQESQHIETSKIQLVARIDLTLLARDPQSNRYISFIKGRAG
EEEEEEECCCEEEECCCCCCCHHCCCCHHHEEEEEEEEEEEEECCCCCCCEEEEECCCCC
RKVSDFFLDFMGAQEGFDAKEQNQGLMKAVDEFCENQALPVAKKKEVREVAFEYCNEQLK
CHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
QGDDIELSVLSEQLQDSPKLEGSFYDFVSEDYQLENSFPVDRSVVRKLTKYVGQGGGISI
CCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
SFDQKHLGERIFYDANSDTLTIQGIPPNLREQLKRDNFADDNQKDDQNPPF
EECHHHHCCEEEEECCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNISASNIILHSLSYNPEGILQCKMREGELPISASIDEFLTKLHRTYQSKTNKAFASFGD
CCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
KTDKSPLFREALTDYMSQQLDFVRFSQKTASCLVEELQKHDFAEEGILLISKYSWTASDY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCE
LFIALLQNNHSVSVNENLELQESQHIETSKIQLVARIDLTLLARDPQSNRYISFIKGRAG
EEEEEEECCCEEEECCCCCCCHHCCCCHHHEEEEEEEEEEEEECCCCCCCEEEEECCCCC
RKVSDFFLDFMGAQEGFDAKEQNQGLMKAVDEFCENQALPVAKKKEVREVAFEYCNEQLK
CHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
QGDDIELSVLSEQLQDSPKLEGSFYDFVSEDYQLENSFPVDRSVVRKLTKYVGQGGGISI
CCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
SFDQKHLGERIFYDANSDTLTIQGIPPNLREQLKRDNFADDNQKDDQNPPF
EECHHHHCCEEEEECCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA