| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is thiL [H]
Identifier: 119945901
GI number: 119945901
Start: 2724929
End: 2725936
Strand: Reverse
Name: thiL [H]
Synonym: Ping_2241
Alternate gene names: 119945901
Gene position: 2725936-2724929 (Counterclockwise)
Preceding gene: 119945902
Following gene: 119945897
Centisome position: 59.78
GC content: 41.17
Gene sequence:
>1008_bases ATGAATCTCAGTGAATTTGATTTGATAGACAGCTATTTTAAACGCAGCACAACAGTTCAAAATAGTGGTGTGGCGTTAGG GATCGGTGATGATTGTGCTCTTTTGGATATTCCAGAGGGTTACCAATTGGCCGTTAGCACTGACAGTTTAGTGTGTGGCG TCCATTTCTTTGAGGATGTTGACCCATATCGGTTAGGTTATAAGGCGCTTGCCGTGAACCTTAGCGACTTAGCTGCGATG GGCGCATTACCTAAATGGGTTTCCCTTGCTATTACGTTACCCAATGGTGCTATGGTGAATAATAATCCCAATTGGTTATC TGAATTTACACGCGGCTTTTTTGCATTAGCAGACAAATTCGATGTGGTGTTGGTGGGGGGTGATACAACAAAAGGTCCTT TATCGATCACTGTTTCTGTGAAAGGTATTGTTCCTCGAGGGTTAGCGCTGCAACGTAATAAAGCTAACTTGGGCGATCTG ATTTGTGTTTCAAATTTTATTGGAGATGGCGCTTTAGGCTTGTCTATAAAATTAAATGAGTTAGCGGTCACAAATCCTCA GTACTTTGTGGATGCGTTAGAGCTGACTGAGCCGCGTGTTGATCTCGGTATTTTATTACGCGGTTTAGCATCAAGCTGTA TAGATATCTCCGATGGTTTAACCCAGGATCTTATCCATATTTTGAAAGCGTCTCATTGCGCTGCAAACATTGCGATAGAA TCTTTACCCTTGTCAAAAACGATGCGGAAAGAAGTTAATTTAGGAAAGCTTAACAATGATGAGGCAGTACAATACGCATT AACCGGTGGGGATGATTATGAATTATTATTTACAATCAGTGAAAATAATTTAAGGCTATTAGAGCAGAGAATAGCTCAAC AAACACAGCCTATACCAAGCCTTTCCGTGATCGGCCGTACGACTTTACAACAATCTGAATTAATCGCGTTTTTTAAAGAA AAGCAAGCGGTTACTTATTCGACGGGCGGATGGGATCATTTTAAGTAG
Upstream 100 bases:
>100_bases ATAGTCATCAGCCGGCAAAAAAAATATTTATCAATAAAAACAGCAAAAACACAACAACACCAACTGCCAATGTAAAAGCA ACCTTGAAGTTAAAACGTAA
Downstream 100 bases:
>100_bases ATTTAAAATTAGAATGATCAATAGCTAAGAAGATTAAAATTAAGTGATCCAGTGTATTCAGTGGTTTAGCAAATGAATAT CAGTAGGCTATCTGCTGCAG
Product: thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MNLSEFDLIDSYFKRSTTVQNSGVALGIGDDCALLDIPEGYQLAVSTDSLVCGVHFFEDVDPYRLGYKALAVNLSDLAAM GALPKWVSLAITLPNGAMVNNNPNWLSEFTRGFFALADKFDVVLVGGDTTKGPLSITVSVKGIVPRGLALQRNKANLGDL ICVSNFIGDGALGLSIKLNELAVTNPQYFVDALELTEPRVDLGILLRGLASSCIDISDGLTQDLIHILKASHCAANIAIE SLPLSKTMRKEVNLGKLNNDEAVQYALTGGDDYELLFTISENNLRLLEQRIAQQTQPIPSLSVIGRTTLQQSELIAFFKE KQAVTYSTGGWDHFK
Sequences:
>Translated_335_residues MNLSEFDLIDSYFKRSTTVQNSGVALGIGDDCALLDIPEGYQLAVSTDSLVCGVHFFEDVDPYRLGYKALAVNLSDLAAM GALPKWVSLAITLPNGAMVNNNPNWLSEFTRGFFALADKFDVVLVGGDTTKGPLSITVSVKGIVPRGLALQRNKANLGDL ICVSNFIGDGALGLSIKLNELAVTNPQYFVDALELTEPRVDLGILLRGLASSCIDISDGLTQDLIHILKASHCAANIAIE SLPLSKTMRKEVNLGKLNNDEAVQYALTGGDDYELLFTISENNLRLLEQRIAQQTQPIPSLSVIGRTTLQQSELIAFFKE KQAVTYSTGGWDHFK >Mature_335_residues MNLSEFDLIDSYFKRSTTVQNSGVALGIGDDCALLDIPEGYQLAVSTDSLVCGVHFFEDVDPYRLGYKALAVNLSDLAAM GALPKWVSLAITLPNGAMVNNNPNWLSEFTRGFFALADKFDVVLVGGDTTKGPLSITVSVKGIVPRGLALQRNKANLGDL ICVSNFIGDGALGLSIKLNELAVTNPQYFVDALELTEPRVDLGILLRGLASSCIDISDGLTQDLIHILKASHCAANIAIE SLPLSKTMRKEVNLGKLNNDEAVQYALTGGDDYELLFTISENNLRLLEQRIAQQTQPIPSLSVIGRTTLQQSELIAFFKE KQAVTYSTGGWDHFK
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=337, Percent_Identity=45.1038575667656, Blast_Score=260, Evalue=1e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 36314; Mature: 36314
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSEFDLIDSYFKRSTTVQNSGVALGIGDDCALLDIPEGYQLAVSTDSLVCGVHFFEDV CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCEEEEECCCEEEEEHHHCCC DPYRLGYKALAVNLSDLAAMGALPKWVSLAITLPNGAMVNNNPNWLSEFTRGFFALADKF CCHHHCCEEEEEEHHHHHHHCCCCCEEEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCC DVVLVGGDTTKGPLSITVSVKGIVPRGLALQRNKANLGDLICVSNFIGDGALGLSIKLNE EEEEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCEEEEHHHCCCCEEEEEEEEEE LAVTNPQYFVDALELTEPRVDLGILLRGLASSCIDISDGLTQDLIHILKASHCAANIAIE EEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHEEEEE SLPLSKTMRKEVNLGKLNNDEAVQYALTGGDDYELLFTISENNLRLLEQRIAQQTQPIPS CCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCC LSVIGRTTLQQSELIAFFKEKQAVTYSTGGWDHFK HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC >Mature Secondary Structure MNLSEFDLIDSYFKRSTTVQNSGVALGIGDDCALLDIPEGYQLAVSTDSLVCGVHFFEDV CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCEEEEECCCEEEEEHHHCCC DPYRLGYKALAVNLSDLAAMGALPKWVSLAITLPNGAMVNNNPNWLSEFTRGFFALADKF CCHHHCCEEEEEEHHHHHHHCCCCCEEEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCC DVVLVGGDTTKGPLSITVSVKGIVPRGLALQRNKANLGDLICVSNFIGDGALGLSIKLNE EEEEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCEEEEHHHCCCCEEEEEEEEEE LAVTNPQYFVDALELTEPRVDLGILLRGLASSCIDISDGLTQDLIHILKASHCAANIAIE EEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHEEEEE SLPLSKTMRKEVNLGKLNNDEAVQYALTGGDDYELLFTISENNLRLLEQRIAQQTQPIPS CCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCC LSVIGRTTLQQSELIAFFKEKQAVTYSTGGWDHFK HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]