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The map label for this gene is rio2 [H]

Identifier: 119945897

GI number: 119945897

Start: 2720143

End: 2720994

Strand: Reverse

Name: rio2 [H]

Synonym: Ping_2237

Alternate gene names: 119945897

Gene position: 2720994-2720143 (Counterclockwise)

Preceding gene: 119945901

Following gene: 119945892

Centisome position: 59.68

GC content: 42.25

Gene sequence:

>852_bases
ATGAAAACACCTAAAAGAATACAACCTCTTGTTGACGATGGTTTAGTTGATAAGGTATTACGCCAATTAATGAGTGGTAA
AGAAGCAACTGTTTTTGTGGTGCAATGTGGTGAGCATGTGCGTTGCGCTAAAGTGTACAAGGAGGCAAGTAAACGTAGTT
TTAAACAAGCCGTTTTATACAATGAAGGCCGCAAAGTACGCAACGGACGTCGCGCCCGTGCGATGGAAAAAGGGTCAAAG
TTTGGACGTGGGGAACAGGAAAAACTTTGGCAGAATGCTGAAGTAGAAGCTTTATACAAATTATCCGATGCAGGCGTACG
CGTACCGCAACCCTACGGCTGTTTTGAAGGTGTTTTATTAATGGATTTAATCACTGACGAAGAGGGGTTTGCCGCGCCAC
GTCTTAATGATGTCAGTATGCCCGAAGAGCAAGCATTAGATGACCATTTGGAAATTATGAATTATGTTGTTCGCATGTTG
AATATTGGCATTATTCACGGTGACTTATCAGAATTTAATGTGTTAGTTGATGAGTGGGGACCTGTGATTATCGATTTACC
TCAAGCCATTGACGCAGCCGGAAATAACAATGCCAAACGAATGTTATTTCGCGATGTTAATAATATGACCGCTTATTATG
CACAATTTGCCCCGGCGCTGAAAGACAGCAAGTATGCCGAAGAAATCTGGGCCTTATATGAAGCAGGTGAGTTGAAAAAT
GATGTTGTGCTAACGGGCTTATTTGCTGAAAGCAATGAAATAACCGATGTCGATAATATTCTAAGTGAAATCAGCGCGGC
ACGTGAAGAGGAAGAAGATCGTATCGCCCGTATGCTTGAGGTTGAAGTATAA

Upstream 100 bases:

>100_bases
GCCCTATAACAGGTACGGACCTTCAACAAGCAAACGACATCAAGCTAAATGCTATCATACTGAAATCAATTATTAACAAT
AAGAGAATGTAAAAAAAAAT

Downstream 100 bases:

>100_bases
CAGTTTAGTTGAGTCCCTTTGATAGGACGTTTACGCTATCGCTTTTAGGTTATGAAGATCCTAAAATCAAGTTATTGAAA
AATGGTGATTATCTATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: AfRio2 [H]

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKTPKRIQPLVDDGLVDKVLRQLMSGKEATVFVVQCGEHVRCAKVYKEASKRSFKQAVLYNEGRKVRNGRRARAMEKGSK
FGRGEQEKLWQNAEVEALYKLSDAGVRVPQPYGCFEGVLLMDLITDEEGFAAPRLNDVSMPEEQALDDHLEIMNYVVRML
NIGIIHGDLSEFNVLVDEWGPVIIDLPQAIDAAGNNNAKRMLFRDVNNMTAYYAQFAPALKDSKYAEEIWALYEAGELKN
DVVLTGLFAESNEITDVDNILSEISAAREEEEDRIARMLEVEV

Sequences:

>Translated_283_residues
MKTPKRIQPLVDDGLVDKVLRQLMSGKEATVFVVQCGEHVRCAKVYKEASKRSFKQAVLYNEGRKVRNGRRARAMEKGSK
FGRGEQEKLWQNAEVEALYKLSDAGVRVPQPYGCFEGVLLMDLITDEEGFAAPRLNDVSMPEEQALDDHLEIMNYVVRML
NIGIIHGDLSEFNVLVDEWGPVIIDLPQAIDAAGNNNAKRMLFRDVNNMTAYYAQFAPALKDSKYAEEIWALYEAGELKN
DVVLTGLFAESNEITDVDNILSEISAAREEEEDRIARMLEVEV
>Mature_283_residues
MKTPKRIQPLVDDGLVDKVLRQLMSGKEATVFVVQCGEHVRCAKVYKEASKRSFKQAVLYNEGRKVRNGRRARAMEKGSK
FGRGEQEKLWQNAEVEALYKLSDAGVRVPQPYGCFEGVLLMDLITDEEGFAAPRLNDVSMPEEQALDDHLEIMNYVVRML
NIGIIHGDLSEFNVLVDEWGPVIIDLPQAIDAAGNNNAKRMLFRDVNNMTAYYAQFAPALKDSKYAEEIWALYEAGELKN
DVVLTGLFAESNEITDVDNILSEISAAREEEEDRIARMLEVEV

Specific function: Unknown

COG id: COG1718

COG function: function code TD; Serine/threonine protein kinase involved in cell cycle control

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 protein kinase domain [H]

Homologues:

Organism=Homo sapiens, GI23510356, Length=213, Percent_Identity=27.2300469483568, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI115532073, Length=204, Percent_Identity=26.4705882352941, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24649986, Length=203, Percent_Identity=30.0492610837438, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24662811, Length=214, Percent_Identity=27.5700934579439, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21356879, Length=214, Percent_Identity=27.5700934579439, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR018934
- InterPro:   IPR015285
- InterPro:   IPR000687
- InterPro:   IPR008266 [H]

Pfam domain/function: PF01163 RIO1; PF09202 Rio2_N [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 31935; Mature: 31935

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00109 PROTEIN_KINASE_TYR ; PS01245 RIO1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPKRIQPLVDDGLVDKVLRQLMSGKEATVFVVQCGEHVRCAKVYKEASKRSFKQAVLY
CCCCHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
NEGRKVRNGRRARAMEKGSKFGRGEQEKLWQNAEVEALYKLSDAGVRVPQPYGCFEGVLL
HCCCHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHEECCCCCCCCCCCCHHHHHHH
MDLITDEEGFAAPRLNDVSMPEEQALDDHLEIMNYVVRMLNIGIIHGDLSEFNVLVDEWG
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCC
PVIIDLPQAIDAAGNNNAKRMLFRDVNNMTAYYAQFAPALKDSKYAEEIWALYEAGELKN
CEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
DVVLTGLFAESNEITDVDNILSEISAAREEEEDRIARMLEVEV
CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTPKRIQPLVDDGLVDKVLRQLMSGKEATVFVVQCGEHVRCAKVYKEASKRSFKQAVLY
CCCCHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
NEGRKVRNGRRARAMEKGSKFGRGEQEKLWQNAEVEALYKLSDAGVRVPQPYGCFEGVLL
HCCCHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHEECCCCCCCCCCCCHHHHHHH
MDLITDEEGFAAPRLNDVSMPEEQALDDHLEIMNYVVRMLNIGIIHGDLSEFNVLVDEWG
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCC
PVIIDLPQAIDAAGNNNAKRMLFRDVNNMTAYYAQFAPALKDSKYAEEIWALYEAGELKN
CEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
DVVLTGLFAESNEITDVDNILSEISAAREEEEDRIARMLEVEV
CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]