| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is mmuM [H]
Identifier: 119945820
GI number: 119945820
Start: 2637096
End: 2638028
Strand: Direct
Name: mmuM [H]
Synonym: Ping_2160
Alternate gene names: 119945820
Gene position: 2637096-2638028 (Clockwise)
Preceding gene: 119945819
Following gene: 119945838
Centisome position: 57.84
GC content: 44.48
Gene sequence:
>933_bases ATGGATAACAGATTAAATATCACTATGAAAAGTCAGTTTAGATTACCGATAATTCTTGATGGCGGAATGGGCCGTGAGCT TAAGCGCATTGGTGCTCCTTTTCAGCAGCCTGAATGGTCAGCTCAAGCGTTAATTGAATCCCCTCATTTTATCTCTGAAG TACATAAAAGCTTTATAGAGGCAGGGGCTGAGGTTATTACCACTAATACCTACGCATTAGTACCCTTTCATATTGGTGAG AAGCGTTTTAACGAACAAGGTGCTGACCTTATTAAGCTTGCCGCAAGATTAGCCCGCGAGTGCGTCAAGGAGAATTCAGC TGTGTTGGTCGCTGGTTGTATTCCGCCAGTGTTAGGCTCTTACCGGCCAGATCTGTTTTCAGTGGAAAAAGCTAAGCCAG TGCTTGAGCTATTGATAAAAAATCAGGAAGCTGATGTGGACATTTGGTTAGCCGAAACGATATCTTCTATCGCAGAAGCC GCCATGATCAAGGCTCGTACTGTTGTCACCAATAAACCAACTTGGATTGCGTTTACCATTAAAGATGAAATAACTACCGA GCCGGCCCTGCGTTCAGGAGAGTCAGTTTATGATGCGGTTAGCCAAATCGCAGGACAAAATGTTTCGGCGATCTTATTTA ATTGCAGCGGTGTCGAAGTGATGGAGACAGCACTTATCACCGCAAAACAGGCGTTATTAGATAAAGAAATTGAAGACCAA GTCCAGTTGGGCGTGTACGCGAATAATTTCCCTCCGATCGGTGAACTGCATCAGGCGAATCAGGATCATGGTGTCTCCGG CATAAGAGATGATGTTCCCCCGGAAAAATACCATGAATTTGGATTATCTTGGATTAACGCTGGCGCCTCTATTATTGGTG GATGTTGCGGGGTTTCACCGGCACATATCAAAAAATTAGCCGAGCTTAAATAG
Upstream 100 bases:
>100_bases CTTTTCCATCCATTAGTTCTTACTGGTGCAAAAAAACCCAAGAAGTTCTAAGTGTCGTGCTTGCTTTACGCCAAGTGCAC GGTTATTCTGCTCCTATTTT
Downstream 100 bases:
>100_bases CCTTATAACCTTATTGCTTTCAAGCTTCGAGCCTTACTGCTTTACAGCCCTTATAGCTTGAATGTCAGTCCCTCCTGAGA CATCATTCGCTTAATAGAGT
Product: homocysteine S-methyltransferase
Products: NA
Alternate protein names: S-methylmethionine:homocysteine methyltransferase [H]
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MDNRLNITMKSQFRLPIILDGGMGRELKRIGAPFQQPEWSAQALIESPHFISEVHKSFIEAGAEVITTNTYALVPFHIGE KRFNEQGADLIKLAARLARECVKENSAVLVAGCIPPVLGSYRPDLFSVEKAKPVLELLIKNQEADVDIWLAETISSIAEA AMIKARTVVTNKPTWIAFTIKDEITTEPALRSGESVYDAVSQIAGQNVSAILFNCSGVEVMETALITAKQALLDKEIEDQ VQLGVYANNFPPIGELHQANQDHGVSGIRDDVPPEKYHEFGLSWINAGASIIGGCCGVSPAHIKKLAELK
Sequences:
>Translated_310_residues MDNRLNITMKSQFRLPIILDGGMGRELKRIGAPFQQPEWSAQALIESPHFISEVHKSFIEAGAEVITTNTYALVPFHIGE KRFNEQGADLIKLAARLARECVKENSAVLVAGCIPPVLGSYRPDLFSVEKAKPVLELLIKNQEADVDIWLAETISSIAEA AMIKARTVVTNKPTWIAFTIKDEITTEPALRSGESVYDAVSQIAGQNVSAILFNCSGVEVMETALITAKQALLDKEIEDQ VQLGVYANNFPPIGELHQANQDHGVSGIRDDVPPEKYHEFGLSWINAGASIIGGCCGVSPAHIKKLAELK >Mature_310_residues MDNRLNITMKSQFRLPIILDGGMGRELKRIGAPFQQPEWSAQALIESPHFISEVHKSFIEAGAEVITTNTYALVPFHIGE KRFNEQGADLIKLAARLARECVKENSAVLVAGCIPPVLGSYRPDLFSVEKAKPVLELLIKNQEADVDIWLAETISSIAEA AMIKARTVVTNKPTWIAFTIKDEITTEPALRSGESVYDAVSQIAGQNVSAILFNCSGVEVMETALITAKQALLDKEIEDQ VQLGVYANNFPPIGELHQANQDHGVSGIRDDVPPEKYHEFGLSWINAGASIIGGCCGVSPAHIKKLAELK
Specific function: Catalyzes methyl transfer from S-methylmethionine or S- adenosylmethionine (less efficient) to homocysteine, selenohomocysteine and less efficiently selenocysteine [H]
COG id: COG2040
COG function: function code E; Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Hcy-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786456, Length=313, Percent_Identity=29.7124600638978, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003726 [H]
Pfam domain/function: PF02574 S-methyl_trans [H]
EC number: =2.1.1.10 [H]
Molecular weight: Translated: 33828; Mature: 33828
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS50970 HCY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNRLNITMKSQFRLPIILDGGMGRELKRIGAPFQQPEWSAQALIESPHFISEVHKSFIE CCCCEEEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH AGAEVITTNTYALVPFHIGEKRFNEQGADLIKLAARLARECVKENSAVLVAGCIPPVLGS CCCCEEECCCEEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHCC YRPDLFSVEKAKPVLELLIKNQEADVDIWLAETISSIAEAAMIKARTVVTNKPTWIAFTI CCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHEEEECCCCEEEEEE KDEITTEPALRSGESVYDAVSQIAGQNVSAILFNCSGVEVMETALITAKQALLDKEIEDQ CCCCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH VQLGVYANNFPPIGELHQANQDHGVSGIRDDVPPEKYHEFGLSWINAGASIIGGCCGVSP HEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCH AHIKKLAELK HHHHHHHHCC >Mature Secondary Structure MDNRLNITMKSQFRLPIILDGGMGRELKRIGAPFQQPEWSAQALIESPHFISEVHKSFIE CCCCEEEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH AGAEVITTNTYALVPFHIGEKRFNEQGADLIKLAARLARECVKENSAVLVAGCIPPVLGS CCCCEEECCCEEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHCC YRPDLFSVEKAKPVLELLIKNQEADVDIWLAETISSIAEAAMIKARTVVTNKPTWIAFTI CCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHEEEECCCCEEEEEE KDEITTEPALRSGESVYDAVSQIAGQNVSAILFNCSGVEVMETALITAKQALLDKEIEDQ CCCCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH VQLGVYANNFPPIGELHQANQDHGVSGIRDDVPPEKYHEFGLSWINAGASIIGGCCGVSP HEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCH AHIKKLAELK HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 9882684; 10026151 [H]