Click here to switch to the map view.

The map label for this gene is dinG [H]

Identifier: 119945838

GI number: 119945838

Start: 2653196

End: 2655256

Strand: Direct

Name: dinG [H]

Synonym: Ping_2178

Alternate gene names: 119945838

Gene position: 2653196-2655256 (Clockwise)

Preceding gene: 119945820

Following gene: 119945839

Centisome position: 58.19

GC content: 41.1

Gene sequence:

>2061_bases
ATGCTTCCAGATTCCCTAAAAATAAAGATCCGGGCAGGTTATACGCTTATTACTCAGGCTTTACCTCATTTTTCAACGCG
TAAAGCACAGAATTATCTGGTCGCTGAAATCGCAAAAGTACTCGCGGGTGAATATGATAAATCACGACGCATACTGGTTG
CAGAGGCCGGTACCGGGATTGGCAAATCATTAGCTTATATACTAGCAGCGCTACCCGTCGCGCAACATGCAAAGAAAAAA
CTCATTATTTCGACTGCGACAATCACTTTGCAGGAGCAATTAATGGTTAAGGATCTGCCTTTTTTTTTGCGCCATAGTGA
ATTTAAATTTACTTTTACCTTAGCTAAAGGGCGTCAGCGTTATTGCTGTGAACATAAACTGTTCAGCACCCAACAAGGCA
CGGAACAACAGGCTTTATTTACCGAAAAACCACAAGCAGGTGATCAGGTATTATTAACACGCCTACATGAAGCGTATCTT
GCGGGTAAATGGTTAGGGGATCGCGATAGTTGGCCAACACCCATTCCAAATCGCGTCTGGCAACAGATCGTTTCCGATAA
ATTCAGCTGTAAACGCGCCTTAGCGAATCATCGCCAGTGCCCTTTTCATCGTGCTCGCGATGCTATCAATAAAGCAGATG
TTATTGTTGTCAACCACGCATTACTGTTGGCCGATCTCGAGTTGGGAGGGGGAATCATTTTACCCGAACCTGATAACTGT
TTTTATGTCCTAGACGAAGCCCATCACCTGCCCAAAATATCCAGAGATTTTTCCAGTGCGCGTGCCAGTATTAAGGGCAG
TCAAGATTGGCTTAAAAAAATCAACCAGCTAAGTCAACATATTAATAAGACCATTAAACGCCATACGACTATTACACCGG
GTATTAATATGCTCGAAAGCGCACAAGAAATAATAAAGGAGCTGAAAACGGTGGAGTTATTTTTTAACAATAACCCCAGC
TACTTTAATGAATCAGATAAATACCGATTTGCATTGGGGGAGTTACCCGAAACATTACATCACCCCGCCTGTCATTTAAA
AGAAGAAAGTAAAAAATGTTTATCGGCTTTAAATAAACTTTCAAATATTATCAGTGAAGAAATCAAAGACGGTAATGTTA
AAACAAAGGATGTTGAACCTTTAATGATTGAACTGGGATTTTTCCAGCAGCGTATCGAAAACATGCAGACACTGTGGGTT
ATGCTGACCAGAGAAAAGACAACCAAGCAGGCACCTATCGCTGCGTGGGCTGAAAGAGAGAAAGCAGAAATTTATTTAAA
TGCTTCACCGATAGAGGTCGGGGGAATATTAGAGAAGATATTTTGGTCACAGGCTGCAGGGATTATTTTATGCTCCGCCA
CATTGACCTCACTGAATAATTTTGAATACTTTAAGCGCCAAAGCGGATTAAAAAGCAATGATGGCACGCAATACTTGCGC
TTAAAGTCCCCCTTTAATTACCCCGCCATCCCTTTAATTATTGCAGATATGGAAAGCGATCCGACTCAAGCGGGTTTTGA
TGATGAACTGATTGAAAAAATAGAAAATTATTTACGCGACAACGAGGGTAATTTAGTTTTATTTGCATCCTACTGGCAAA
TGAATTTAGTGGCCGATAAGCTCAATAAGAAATACCAAGAGGCTTTATTAATACAAGGCGTCTTGTCGCGCAGCAAACTT
ATCAAAACACATAAGCAGCGCTGTGATCAAGGCAAAACAAGTATTATCTTCGGTACCGGCGGATTATCCGAGGGACTGGA
TTTGCCCGGACATTATTTGACCAACTTGATTATTACCAAATTACCTTTCGCCGTACCAAACTCTCCCGTTGAAGAAGCGC
ATTCTGAATGGATAAAAGCCCAAGGTGGCAACCCTTTTTTACAGCTTTCTATTCCAGAGACAAGTAAAAAACTGATCCAG
TCATGTGGACGATTGATTAGAAAAGAAAATGACACAGGGCGAATTATTATATTGGATAAGAGAGTAAAAACGAAACGTTA
CGGAAAAGGTTTACTGGATGCGCTTCCCCCTTTTGCGATTCAATTTGAGCATAAACATTAA

Upstream 100 bases:

>100_bases
TAAGATCTATGATTAAATCATGCCATAAAAGTATGATAGAAATTCTGTTTAGTGCAGATATTTTTGTTAAAATGCTTTTT
TTACTTTAACCGCGAAATAT

Downstream 100 bases:

>100_bases
TGACTGAACTTTTTTTTGACCCCGGCACTTGGGCGTTACTTGTTTTTGTAGGCTTGATCGCAGGTTTTATTGATGCGGTC
GTTGGCGGAGGAGGCATGCT

Product: ATP-dependent DNA helicase DinG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 686; Mature: 686

Protein sequence:

>686_residues
MLPDSLKIKIRAGYTLITQALPHFSTRKAQNYLVAEIAKVLAGEYDKSRRILVAEAGTGIGKSLAYILAALPVAQHAKKK
LIISTATITLQEQLMVKDLPFFLRHSEFKFTFTLAKGRQRYCCEHKLFSTQQGTEQQALFTEKPQAGDQVLLTRLHEAYL
AGKWLGDRDSWPTPIPNRVWQQIVSDKFSCKRALANHRQCPFHRARDAINKADVIVVNHALLLADLELGGGIILPEPDNC
FYVLDEAHHLPKISRDFSSARASIKGSQDWLKKINQLSQHINKTIKRHTTITPGINMLESAQEIIKELKTVELFFNNNPS
YFNESDKYRFALGELPETLHHPACHLKEESKKCLSALNKLSNIISEEIKDGNVKTKDVEPLMIELGFFQQRIENMQTLWV
MLTREKTTKQAPIAAWAEREKAEIYLNASPIEVGGILEKIFWSQAAGIILCSATLTSLNNFEYFKRQSGLKSNDGTQYLR
LKSPFNYPAIPLIIADMESDPTQAGFDDELIEKIENYLRDNEGNLVLFASYWQMNLVADKLNKKYQEALLIQGVLSRSKL
IKTHKQRCDQGKTSIIFGTGGLSEGLDLPGHYLTNLIITKLPFAVPNSPVEEAHSEWIKAQGGNPFLQLSIPETSKKLIQ
SCGRLIRKENDTGRIIILDKRVKTKRYGKGLLDALPPFAIQFEHKH

Sequences:

>Translated_686_residues
MLPDSLKIKIRAGYTLITQALPHFSTRKAQNYLVAEIAKVLAGEYDKSRRILVAEAGTGIGKSLAYILAALPVAQHAKKK
LIISTATITLQEQLMVKDLPFFLRHSEFKFTFTLAKGRQRYCCEHKLFSTQQGTEQQALFTEKPQAGDQVLLTRLHEAYL
AGKWLGDRDSWPTPIPNRVWQQIVSDKFSCKRALANHRQCPFHRARDAINKADVIVVNHALLLADLELGGGIILPEPDNC
FYVLDEAHHLPKISRDFSSARASIKGSQDWLKKINQLSQHINKTIKRHTTITPGINMLESAQEIIKELKTVELFFNNNPS
YFNESDKYRFALGELPETLHHPACHLKEESKKCLSALNKLSNIISEEIKDGNVKTKDVEPLMIELGFFQQRIENMQTLWV
MLTREKTTKQAPIAAWAEREKAEIYLNASPIEVGGILEKIFWSQAAGIILCSATLTSLNNFEYFKRQSGLKSNDGTQYLR
LKSPFNYPAIPLIIADMESDPTQAGFDDELIEKIENYLRDNEGNLVLFASYWQMNLVADKLNKKYQEALLIQGVLSRSKL
IKTHKQRCDQGKTSIIFGTGGLSEGLDLPGHYLTNLIITKLPFAVPNSPVEEAHSEWIKAQGGNPFLQLSIPETSKKLIQ
SCGRLIRKENDTGRIIILDKRVKTKRYGKGLLDALPPFAIQFEHKH
>Mature_686_residues
MLPDSLKIKIRAGYTLITQALPHFSTRKAQNYLVAEIAKVLAGEYDKSRRILVAEAGTGIGKSLAYILAALPVAQHAKKK
LIISTATITLQEQLMVKDLPFFLRHSEFKFTFTLAKGRQRYCCEHKLFSTQQGTEQQALFTEKPQAGDQVLLTRLHEAYL
AGKWLGDRDSWPTPIPNRVWQQIVSDKFSCKRALANHRQCPFHRARDAINKADVIVVNHALLLADLELGGGIILPEPDNC
FYVLDEAHHLPKISRDFSSARASIKGSQDWLKKINQLSQHINKTIKRHTTITPGINMLESAQEIIKELKTVELFFNNNPS
YFNESDKYRFALGELPETLHHPACHLKEESKKCLSALNKLSNIISEEIKDGNVKTKDVEPLMIELGFFQQRIENMQTLWV
MLTREKTTKQAPIAAWAEREKAEIYLNASPIEVGGILEKIFWSQAAGIILCSATLTSLNNFEYFKRQSGLKSNDGTQYLR
LKSPFNYPAIPLIIADMESDPTQAGFDDELIEKIENYLRDNEGNLVLFASYWQMNLVADKLNKKYQEALLIQGVLSRSKL
IKTHKQRCDQGKTSIIFGTGGLSEGLDLPGHYLTNLIITKLPFAVPNSPVEEAHSEWIKAQGGNPFLQLSIPETSKKLIQ
SCGRLIRKENDTGRIIILDKRVKTKRYGKGLLDALPPFAIQFEHKH

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787018, Length=706, Percent_Identity=33.28611898017, Blast_Score=329, Evalue=3e-91,
Organism=Escherichia coli, GI1788110, Length=678, Percent_Identity=26.8436578171091, Blast_Score=196, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650 [H]

Pfam domain/function: PF06733 DEAD_2 [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 77595; Mature: 77595

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDSLKIKIRAGYTLITQALPHFSTRKAQNYLVAEIAKVLAGEYDKSRRILVAEAGTGI
CCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
GKSLAYILAALPVAQHAKKKLIISTATITLQEQLMVKDLPFFLRHSEFKFTFTLAKGRQR
HHHHHHHHHHHHHHHHHCCEEEEEEEEEHHHHHHHHHHCCHHHCCCCEEEEEEECCCCHH
YCCEHKLFSTQQGTEQQALFTEKPQAGDQVLLTRLHEAYLAGKWLGDRDSWPTPIPNRVW
HHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
QQIVSDKFSCKRALANHRQCPFHRARDAINKADVIVVNHALLLADLELGGGIILPEPDNC
HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEEEEEEEEECCCEEEEECCCCC
FYVLDEAHHLPKISRDFSSARASIKGSQDWLKKINQLSQHINKTIKRHTTITPGINMLES
EEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AQEIIKELKTVELFFNNNPSYFNESDKYRFALGELPETLHHPACHLKEESKKCLSALNKL
HHHHHHHHHEEEEEECCCCCCCCCCCCEEEEHHHCCHHHCCCHHHHHHHHHHHHHHHHHH
SNIISEEIKDGNVKTKDVEPLMIELGFFQQRIENMQTLWVMLTREKTTKQAPIAAWAERE
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHCCC
KAEIYLNASPIEVGGILEKIFWSQAAGIILCSATLTSLNNFEYFKRQSGLKSNDGTQYLR
CEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHCCCCCCCCCEEEE
LKSPFNYPAIPLIIADMESDPTQAGFDDELIEKIENYLRDNEGNLVLFASYWQMNLVADK
ECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHH
LNKKYQEALLIQGVLSRSKLIKTHKQRCDQGKTSIIFGTGGLSEGLDLPGHYLTNLIITK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH
LPFAVPNSPVEEAHSEWIKAQGGNPFLQLSIPETSKKLIQSCGRLIRKENDTGRIIILDK
CCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEC
RVKTKRYGKGLLDALPPFAIQFEHKH
CHHHHHHCCCHHHHCCCCEEEECCCC
>Mature Secondary Structure
MLPDSLKIKIRAGYTLITQALPHFSTRKAQNYLVAEIAKVLAGEYDKSRRILVAEAGTGI
CCCCCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
GKSLAYILAALPVAQHAKKKLIISTATITLQEQLMVKDLPFFLRHSEFKFTFTLAKGRQR
HHHHHHHHHHHHHHHHHCCEEEEEEEEEHHHHHHHHHHCCHHHCCCCEEEEEEECCCCHH
YCCEHKLFSTQQGTEQQALFTEKPQAGDQVLLTRLHEAYLAGKWLGDRDSWPTPIPNRVW
HHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
QQIVSDKFSCKRALANHRQCPFHRARDAINKADVIVVNHALLLADLELGGGIILPEPDNC
HHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEEEEEEEEEECCCEEEEECCCCC
FYVLDEAHHLPKISRDFSSARASIKGSQDWLKKINQLSQHINKTIKRHTTITPGINMLES
EEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AQEIIKELKTVELFFNNNPSYFNESDKYRFALGELPETLHHPACHLKEESKKCLSALNKL
HHHHHHHHHEEEEEECCCCCCCCCCCCEEEEHHHCCHHHCCCHHHHHHHHHHHHHHHHHH
SNIISEEIKDGNVKTKDVEPLMIELGFFQQRIENMQTLWVMLTREKTTKQAPIAAWAERE
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHCCC
KAEIYLNASPIEVGGILEKIFWSQAAGIILCSATLTSLNNFEYFKRQSGLKSNDGTQYLR
CEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHCCCCCCCCCEEEE
LKSPFNYPAIPLIIADMESDPTQAGFDDELIEKIENYLRDNEGNLVLFASYWQMNLVADK
ECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHH
LNKKYQEALLIQGVLSRSKLIKTHKQRCDQGKTSIIFGTGGLSEGLDLPGHYLTNLIITK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH
LPFAVPNSPVEEAHSEWIKAQGGNPFLQLSIPETSKKLIQSCGRLIRKENDTGRIIILDK
CCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEC
RVKTKRYGKGLLDALPPFAIQFEHKH
CHHHHHHCCCHHHHCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396546; 8385320 [H]