| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945731
Identifier: 119945731
GI number: 119945731
Start: 2506942
End: 2507586
Strand: Reverse
Name: 119945731
Synonym: Ping_2059
Alternate gene names: NA
Gene position: 2507586-2506942 (Counterclockwise)
Preceding gene: 119945732
Following gene: 119945729
Centisome position: 55.0
GC content: 35.19
Gene sequence:
>645_bases TTGACCCCATTATTAGAGCGTGATGTCCATCTATTTGATCTTGATAATACTTTATATCATCCTGAAAATGCCATTTTAGA GCAAATAGCTCCTAGAATGCGTAGCTTTATTAGTAATGAGCTAGCTATCTCCATTGAAGAATCTAATGTGCTGTGTAACA GCTATTATCAACGTTATGGTGGTACGATAAGAGGGATTCAATTACATTATCCAAGTGTCGATCTTAATAAGTTTTCTGAG TTCTCTCATCAGGTTAATTTAGATAAGGTTGAAAAAGCAACAAAGCTTAAAGACGCATTACATGCATTTAAAAAATCACG TTATGTGTTTACCAACTCGCCACTGCCTTATGCGACAAGAGTCTTAAAACATATTGATTTATATGACTGTTTTGATGGTA TTTTTAGTGTCGAGCTGACCGGTTACAAAATGAAGCCTGATCCACATGCATTTAATACCATTTGCCAACACTTTGGTTTT GAAGCCTCTGATGCTGCTTTTTACGATGACCAGATATCAAATATTTCCACCGCAAAAGCCTTAGGAATGCGTACTATTTT AGTTAACAGAAGTGATATTGATAAACACGATGCCTGTTATAAAACGGAAGACCTACCTAGTTTTGTAGAATCATTAATAA AGTGA
Upstream 100 bases:
>100_bases GGCCCTAAACGAATGACAATAAAGACTATTTCACTACATTGAGCTTTTGAAAGAAATAGTGATATTATCCCCATTTACTG ATAAACAAAGAGGCAATACT
Downstream 100 bases:
>100_bases TTTTCCATAGTGCCACATATTATCATTGCTGCGGCTGAGTCATTTTGGTCATGTTTTAGTCAGTTTCTGGCATACTTTGA AAGCGTCAGTGACTCAACCT
Product: pyrimidine 5'-nucleotidase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; HAD Superfamily Hydrolase; Haloacid Dehalogenase Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily; Haloacid Dehalogenase
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTPLLERDVHLFDLDNTLYHPENAILEQIAPRMRSFISNELAISIEESNVLCNSYYQRYGGTIRGIQLHYPSVDLNKFSE FSHQVNLDKVEKATKLKDALHAFKKSRYVFTNSPLPYATRVLKHIDLYDCFDGIFSVELTGYKMKPDPHAFNTICQHFGF EASDAAFYDDQISNISTAKALGMRTILVNRSDIDKHDACYKTEDLPSFVESLIK
Sequences:
>Translated_214_residues MTPLLERDVHLFDLDNTLYHPENAILEQIAPRMRSFISNELAISIEESNVLCNSYYQRYGGTIRGIQLHYPSVDLNKFSE FSHQVNLDKVEKATKLKDALHAFKKSRYVFTNSPLPYATRVLKHIDLYDCFDGIFSVELTGYKMKPDPHAFNTICQHFGF EASDAAFYDDQISNISTAKALGMRTILVNRSDIDKHDACYKTEDLPSFVESLIK >Mature_213_residues TPLLERDVHLFDLDNTLYHPENAILEQIAPRMRSFISNELAISIEESNVLCNSYYQRYGGTIRGIQLHYPSVDLNKFSEF SHQVNLDKVEKATKLKDALHAFKKSRYVFTNSPLPYATRVLKHIDLYDCFDGIFSVELTGYKMKPDPHAFNTICQHFGFE ASDAAFYDDQISNISTAKALGMRTILVNRSDIDKHDACYKTEDLPSFVESLIK
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320875, Length=204, Percent_Identity=27.4509803921569, Blast_Score=72, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6321214, Length=190, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24554; Mature: 24423
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLLERDVHLFDLDNTLYHPENAILEQIAPRMRSFISNELAISIEESNVLCNSYYQRYG CCCCCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHC GTIRGIQLHYPSVDLNKFSEFSHQVNLDKVEKATKLKDALHAFKKSRYVFTNSPLPYATR CEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHH VLKHIDLYDCFDGIFSVELTGYKMKPDPHAFNTICQHFGFEASDAAFYDDQISNISTAKA HHHHCCHHHHHHHHEEEEEECEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHH LGMRTILVNRSDIDKHDACYKTEDLPSFVESLIK HHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHC >Mature Secondary Structure TPLLERDVHLFDLDNTLYHPENAILEQIAPRMRSFISNELAISIEESNVLCNSYYQRYG CCCCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHC GTIRGIQLHYPSVDLNKFSEFSHQVNLDKVEKATKLKDALHAFKKSRYVFTNSPLPYATR CEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHH VLKHIDLYDCFDGIFSVELTGYKMKPDPHAFNTICQHFGFEASDAAFYDDQISNISTAKA HHHHCCHHHHHHHHEEEEEECEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHH LGMRTILVNRSDIDKHDACYKTEDLPSFVESLIK HHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA