| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is ygjP [H]
Identifier: 119945732
GI number: 119945732
Start: 2510134
End: 2510658
Strand: Reverse
Name: ygjP [H]
Synonym: Ping_2061
Alternate gene names: 119945732
Gene position: 2510658-2510134 (Counterclockwise)
Preceding gene: 119945735
Following gene: 119945731
Centisome position: 55.06
GC content: 31.62
Gene sequence:
>525_bases ATGCCATCCTCAAAAAACCAGTCAATTTCACTTAAGTATTTATCTTCATATTCATCAGTAGTACAAGATCAAATCAGGTT AATGATTGAACAAGATACCTTAGGACGTTTTTTGCTCAAAAAATATCCTCAAAAACATAATATTAACAACGATAAAATGC TTCGTGAATATGTAATGGATTTGAAAAATAATAATTTACGAAAATCTTCACCCTTAAGTAAAATTATTTACGATAAGAAA ATCCATGTTATTAACAATGCGCTTGGTTTACATACGTTTATTTCAAGAGTGCAGGGGGGGAAATTAAAAAGTAAAAATGA AATACGAATTAGTGAAATTTTCAAAACCGCCCCGGAAGCATTTTTAGAAATGATCGTTGTTCATGAGTTAGCTCACCTTC GAATAAAGGCACACGACAAAGCTTTTTATCAATTGTGCCAGCATATGCTGCCCGAGTATCATCAGTTAGAATTTGAAATG CGTTTATACCTCACTCAATTAGACCTTAAAGGAAAAATTTACTAA
Upstream 100 bases:
>100_bases TTATATTATGTGAAGCCAATCTTATATTTTCTTACTACCGGATTATAAATAACTAAGGTACAATTTTAGTCATTTAACTT ATCTTATACAGTATTGTCCT
Downstream 100 bases:
>100_bases CTATTGTGACCTGCTGACCTTATCTCTGTACATTAATTAGATGAGTAAAAGCGCTAGATGTGCCTGTGAATTTTTTTGTG AAACAGAAGAAAATGCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MPSSKNQSISLKYLSSYSSVVQDQIRLMIEQDTLGRFLLKKYPQKHNINNDKMLREYVMDLKNNNLRKSSPLSKIIYDKK IHVINNALGLHTFISRVQGGKLKSKNEIRISEIFKTAPEAFLEMIVVHELAHLRIKAHDKAFYQLCQHMLPEYHQLEFEM RLYLTQLDLKGKIY
Sequences:
>Translated_174_residues MPSSKNQSISLKYLSSYSSVVQDQIRLMIEQDTLGRFLLKKYPQKHNINNDKMLREYVMDLKNNNLRKSSPLSKIIYDKK IHVINNALGLHTFISRVQGGKLKSKNEIRISEIFKTAPEAFLEMIVVHELAHLRIKAHDKAFYQLCQHMLPEYHQLEFEM RLYLTQLDLKGKIY >Mature_173_residues PSSKNQSISLKYLSSYSSVVQDQIRLMIEQDTLGRFLLKKYPQKHNINNDKMLREYVMDLKNNNLRKSSPLSKIIYDKKI HVINNALGLHTFISRVQGGKLKSKNEIRISEIFKTAPEAFLEMIVVHELAHLRIKAHDKAFYQLCQHMLPEYHQLEFEMR LYLTQLDLKGKIY
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082207, Length=160, Percent_Identity=58.125, Blast_Score=201, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002725 [H]
Pfam domain/function: PF01863 DUF45 [H]
EC number: NA
Molecular weight: Translated: 20507; Mature: 20376
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSKNQSISLKYLSSYSSVVQDQIRLMIEQDTLGRFLLKKYPQKHNINNDKMLREYVMD CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LKNNNLRKSSPLSKIIYDKKIHVINNALGLHTFISRVQGGKLKSKNEIRISEIFKTAPEA HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH FLEMIVVHELAHLRIKAHDKAFYQLCQHMLPEYHQLEFEMRLYLTQLDLKGKIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PSSKNQSISLKYLSSYSSVVQDQIRLMIEQDTLGRFLLKKYPQKHNINNDKMLREYVMD CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LKNNNLRKSSPLSKIIYDKKIHVINNALGLHTFISRVQGGKLKSKNEIRISEIFKTAPEA HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH FLEMIVVHELAHLRIKAHDKAFYQLCQHMLPEYHQLEFEMRLYLTQLDLKGKIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]