| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is galT [H]
Identifier: 119945699
GI number: 119945699
Start: 2453997
End: 2455049
Strand: Direct
Name: galT [H]
Synonym: Ping_2016
Alternate gene names: 119945699
Gene position: 2453997-2455049 (Clockwise)
Preceding gene: 119945698
Following gene: 119945700
Centisome position: 53.82
GC content: 45.39
Gene sequence:
>1053_bases ATGACAACCATCGCTTTCAACCCAATAGACCACCCGCACCGTCGTTATAATCCACTGACGGGGCAATGGATATTAGTCTC TCCGCACCGCGCAAAACGCCCCTGGAGTGGTCAAGATGAAGCACCTGCAACTGCAACATTAGCAAGTTACGATAAAGACT GTTTTTTATGTCCCACCAATGAACGCATTTCCGGTGATAAAAATCCGGATTACGTTGGCACTTATGTTTTTAACAATGAC TTCGCGGCGTTAATGCCTGACAGCCCGAATGCACCTGTTTCTGCAAATCCATTGTTTAAAACGCAAGGCGTACGCGGGTT AAGTCGCGTTATCTGTTTTTCACCAGATCACAGTAAAACACTCCCTGAGCTGCCGGTGAATAAAATCCGCAAGGTTATCG ATACCTGGAACGAGCAGATTGAAGAATTGGGTAAAGATTATTTATGGGTACAAGCGTTTGAAAATAAAGGCGCGGCCATG GGTTGCTCACAGCCACATCCGCACGGACAAATATGGGCAAATAGCTTTTTACCCAATGAAATTGAACGTAAAGAAACCTT ATTAAAAGCTTACTCTGAAGAACATGGATCAAACCTGTTAATGGATTATGTGCAAGCCGAGTTACAGGATGGTGAACGCA CCGTGGTTGAAACCGAGCATTGGCTGGCGGTTGTTCCTTACTGGGCGGCATGGCCCTTTGAAACTATGTTGTTACCAAAA ACACCTATTCGCCGCATGAGTGAATTAACCAATCCACAGCGCGATGATTTAGCACTGGCCATTAAAAAGCTGACCAGCCG TTACGATAATTTATTCCAATGCTCATTCCCCTATTCAATGGGCTGGCACTATGCGCCGTTTTTTGAAGCTGGCACAAATA TCGACCATTGGCAGCTGCACGCCCTGTTTTACCCACCGTTATTGCGTTCAGCAAGCGTCCGTAAATTTATGGTCGGTTAT GAAATGTTGGCCGAAAGTCAGCGTGATTTAACCGCTGAACAGGCGGCTCAAAAATTACGTGATGTAAGTGATATTCATTA CCTGGAAAGTTAG
Upstream 100 bases:
>100_bases TACTCAAAAGCTTAACCCTTACTGGCCATTATTTTTACCTGCTATAAATATTCCCCACCCGCAATATTAGCGAGTGGTGC AGCATACAGAAGAGGACACT
Downstream 100 bases:
>100_bases TACAAAAATAATAACAAAAAACGTGTTTTTGAAGCCTTTATAATTGAGAGAAAATGATGATTAGTTTAATTGAAAATGTA AAAAATGCTTTTATTAAGCA
Product: galactose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Gal-1-P uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase [H]
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTTIAFNPIDHPHRRYNPLTGQWILVSPHRAKRPWSGQDEAPATATLASYDKDCFLCPTNERISGDKNPDYVGTYVFNND FAALMPDSPNAPVSANPLFKTQGVRGLSRVICFSPDHSKTLPELPVNKIRKVIDTWNEQIEELGKDYLWVQAFENKGAAM GCSQPHPHGQIWANSFLPNEIERKETLLKAYSEEHGSNLLMDYVQAELQDGERTVVETEHWLAVVPYWAAWPFETMLLPK TPIRRMSELTNPQRDDLALAIKKLTSRYDNLFQCSFPYSMGWHYAPFFEAGTNIDHWQLHALFYPPLLRSASVRKFMVGY EMLAESQRDLTAEQAAQKLRDVSDIHYLES
Sequences:
>Translated_350_residues MTTIAFNPIDHPHRRYNPLTGQWILVSPHRAKRPWSGQDEAPATATLASYDKDCFLCPTNERISGDKNPDYVGTYVFNND FAALMPDSPNAPVSANPLFKTQGVRGLSRVICFSPDHSKTLPELPVNKIRKVIDTWNEQIEELGKDYLWVQAFENKGAAM GCSQPHPHGQIWANSFLPNEIERKETLLKAYSEEHGSNLLMDYVQAELQDGERTVVETEHWLAVVPYWAAWPFETMLLPK TPIRRMSELTNPQRDDLALAIKKLTSRYDNLFQCSFPYSMGWHYAPFFEAGTNIDHWQLHALFYPPLLRSASVRKFMVGY EMLAESQRDLTAEQAAQKLRDVSDIHYLES >Mature_349_residues TTIAFNPIDHPHRRYNPLTGQWILVSPHRAKRPWSGQDEAPATATLASYDKDCFLCPTNERISGDKNPDYVGTYVFNNDF AALMPDSPNAPVSANPLFKTQGVRGLSRVICFSPDHSKTLPELPVNKIRKVIDTWNEQIEELGKDYLWVQAFENKGAAMG CSQPHPHGQIWANSFLPNEIERKETLLKAYSEEHGSNLLMDYVQAELQDGERTVVETEHWLAVVPYWAAWPFETMLLPKT PIRRMSELTNPQRDDLALAIKKLTSRYDNLFQCSFPYSMGWHYAPFFEAGTNIDHWQLHALFYPPLLRSASVRKFMVGYE MLAESQRDLTAEQAAQKLRDVSDIHYLES
Specific function: Galactose metabolism; second step. [C]
COG id: COG1085
COG function: function code C; Galactose-1-phosphate uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the galactose-1-phosphate uridylyltransferase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI22165416, Length=343, Percent_Identity=55.6851311953353, Blast_Score=402, Evalue=1e-112, Organism=Escherichia coli, GI1786973, Length=345, Percent_Identity=73.6231884057971, Blast_Score=542, Evalue=1e-155, Organism=Caenorhabditis elegans, GI17557105, Length=340, Percent_Identity=44.7058823529412, Blast_Score=306, Evalue=1e-83, Organism=Saccharomyces cerevisiae, GI6319492, Length=364, Percent_Identity=47.5274725274725, Blast_Score=356, Evalue=3e-99, Organism=Drosophila melanogaster, GI24582285, Length=349, Percent_Identity=55.3008595988539, Blast_Score=389, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001937 - InterPro: IPR019779 - InterPro: IPR005850 - InterPro: IPR005849 - InterPro: IPR011146 - InterPro: IPR011151 [H]
Pfam domain/function: PF02744 GalP_UDP_tr_C; PF01087 GalP_UDP_transf [H]
EC number: =2.7.7.12 [H]
Molecular weight: Translated: 40090; Mature: 39958
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00117 GAL_P_UDP_TRANSF_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIAFNPIDHPHRRYNPLTGQWILVSPHRAKRPWSGQDEAPATATLASYDKDCFLCPTN CCEEECCCCCCCHHHCCCCCCCEEEECCHHCCCCCCCCCCCCCHHHHHHCCCCEEECCCC ERISGDKNPDYVGTYVFNNDFAALMPDSPNAPVSANPLFKTQGVRGLSRVICFSPDHSKT CCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCHHHCCCCCHHHEEEECCCCCCC LPELPVNKIRKVIDTWNEQIEELGKDYLWVQAFENKGAAMGCSQPHPHGQIWANSFLPNE CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCH IERKETLLKAYSEEHGSNLLMDYVQAELQDGERTVVETEHWLAVVPYWAAWPFETMLLPK HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCEEEEECHHHCCCCCEEECCC TPIRRMSELTNPQRDDLALAIKKLTSRYDNLFQCSFPYSMGWHYAPFFEAGTNIDHWQLH CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHCCCCCCCEEEE ALFYPPLLRSASVRKFMVGYEMLAESQRDLTAEQAAQKLRDVSDIHYLES EEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTIAFNPIDHPHRRYNPLTGQWILVSPHRAKRPWSGQDEAPATATLASYDKDCFLCPTN CEEECCCCCCCHHHCCCCCCCEEEECCHHCCCCCCCCCCCCCHHHHHHCCCCEEECCCC ERISGDKNPDYVGTYVFNNDFAALMPDSPNAPVSANPLFKTQGVRGLSRVICFSPDHSKT CCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCHHHCCCCCHHHEEEECCCCCCC LPELPVNKIRKVIDTWNEQIEELGKDYLWVQAFENKGAAMGCSQPHPHGQIWANSFLPNE CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCH IERKETLLKAYSEEHGSNLLMDYVQAELQDGERTVVETEHWLAVVPYWAAWPFETMLLPK HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCEEEEECHHHCCCCCEEECCC TPIRRMSELTNPQRDDLALAIKKLTSRYDNLFQCSFPYSMGWHYAPFFEAGTNIDHWQLH CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHCCCCCCCEEEE ALFYPPLLRSASVRKFMVGYEMLAESQRDLTAEQAAQKLRDVSDIHYLES EEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3022232; 8905232; 9278503; 3158881; 2823224; 321007; 8794735; 10820011; 7669762; 9063869 [H]