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The map label for this gene is yurN [H]

Identifier: 119945693

GI number: 119945693

Start: 2445190

End: 2446146

Strand: Reverse

Name: yurN [H]

Synonym: Ping_2010

Alternate gene names: 119945693

Gene position: 2446146-2445190 (Counterclockwise)

Preceding gene: 119945696

Following gene: 119945692

Centisome position: 53.65

GC content: 41.69

Gene sequence:

>957_bases
ATGATGATAATTGTGCAAGTCTCGAAACTCGGAAAGGTGGAGTGTTCAGTGAAAACAACGTACCCAAAAAGCCGATTGCC
TTCGGTTAGAAAAAAAAGGCGAATTAGTGCGAAATTATCTCCATGGCTGTTTTTAGCCCCGGCAATGATAATTTTTTCTG
TTTATGTGTTATATCCCATCTTATCCAGTATCTCGTTAAGCTTTTACAACTGGGATGGTATGGGAGAAAAAACCTGGGTC
GGTTTTGGCAACTATGTTGAACTATTTGATTCGGACGCTTTTTATACCTCTTTGAAAAATAACTTATTATGGTTAATTTT
CTATATGCTTGCGCCGCCCCTTGGTCTGCTAATTGCACTTTTCCTAAATCAACAAGTTAAGGGCATTCGGATTGTAAAAT
CCCTGTTTTTCTTTCCTTTTGTTATCTCCCAAGTGGTGGTCGGTTTAGTGTTTGCATGGTTTTATGACCCTAGTTTTGGC
CTGTTTAATATTGCCATAGGCGCATTGGGTTTTGAGCCAGTAGCCATTCTGGCGAACGAGGATTATGTCACTTTCGGGAT
CATTGCTGCGGGTCTTTGGCCGCAGATAGCGTACTGCATGATTCTTTATATGACCGGGCTTAATAATCTTGATGCAGAAC
AATTAGAAGCCGCACGTTTAGATGGCGCTAAAAGATTAAAAATGCTCTGGTATGTAGTGCTGCCCCAACTAAGACCCGCA
ACCTTTATTGCGATTGTGGTGACTATTATTGGTGCTTTACGTTCATTTGACCTTGTGGCAACGATGACTGCGGGCGGCCC
ATGGGGTAGTTCGTCAGTGCTTGCCTATCAAATGTATGAAGAATCTATCTTTAACTATCGCATGGGTTACGGTGCTGCGG
TATCCGTCGTGCTGTTCTTAATCATGGATGTTTATATCGCATATTTCTTATGGCGTATGCTAAGGAGAGAAAAATAA

Upstream 100 bases:

>100_bases
GTAAAGGTTTGATTAGGTTTTACTATCTTTAATCCATCGTGTTTGTTGTGAGCTTTCATAAAAATTGAACTTGATTTCTA
TGTAAATATTGATCACAAAG

Downstream 100 bases:

>100_bases
TGTTTCCCAAACCAATAAAAAAATCAGGCCGCTTTGCCAATATAAGCTACCGCGTTGCCCTGCCTATTTCGATTGTACTG
TGGTTACTGCCGTTAATTGC

Product: ABC transporter substrate binding inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MMIIVQVSKLGKVECSVKTTYPKSRLPSVRKKRRISAKLSPWLFLAPAMIIFSVYVLYPILSSISLSFYNWDGMGEKTWV
GFGNYVELFDSDAFYTSLKNNLLWLIFYMLAPPLGLLIALFLNQQVKGIRIVKSLFFFPFVISQVVVGLVFAWFYDPSFG
LFNIAIGALGFEPVAILANEDYVTFGIIAAGLWPQIAYCMILYMTGLNNLDAEQLEAARLDGAKRLKMLWYVVLPQLRPA
TFIAIVVTIIGALRSFDLVATMTAGGPWGSSSVLAYQMYEESIFNYRMGYGAAVSVVLFLIMDVYIAYFLWRMLRREK

Sequences:

>Translated_318_residues
MMIIVQVSKLGKVECSVKTTYPKSRLPSVRKKRRISAKLSPWLFLAPAMIIFSVYVLYPILSSISLSFYNWDGMGEKTWV
GFGNYVELFDSDAFYTSLKNNLLWLIFYMLAPPLGLLIALFLNQQVKGIRIVKSLFFFPFVISQVVVGLVFAWFYDPSFG
LFNIAIGALGFEPVAILANEDYVTFGIIAAGLWPQIAYCMILYMTGLNNLDAEQLEAARLDGAKRLKMLWYVVLPQLRPA
TFIAIVVTIIGALRSFDLVATMTAGGPWGSSSVLAYQMYEESIFNYRMGYGAAVSVVLFLIMDVYIAYFLWRMLRREK
>Mature_318_residues
MMIIVQVSKLGKVECSVKTTYPKSRLPSVRKKRRISAKLSPWLFLAPAMIIFSVYVLYPILSSISLSFYNWDGMGEKTWV
GFGNYVELFDSDAFYTSLKNNLLWLIFYMLAPPLGLLIALFLNQQVKGIRIVKSLFFFPFVISQVVVGLVFAWFYDPSFG
LFNIAIGALGFEPVAILANEDYVTFGIIAAGLWPQIAYCMILYMTGLNNLDAEQLEAARLDGAKRLKMLWYVVLPQLRPA
TFIAIVVTIIGALRSFDLVATMTAGGPWGSSSVLAYQMYEESIFNYRMGYGAAVSVVLFLIMDVYIAYFLWRMLRREK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=274, Percent_Identity=26.6423357664234, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787570, Length=265, Percent_Identity=26.0377358490566, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36007; Mature: 36007

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIIVQVSKLGKVECSVKTTYPKSRLPSVRKKRRISAKLSPWLFLAPAMIIFSVYVLYPI
CEEEEEECCCCCEEEEEEECCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LSSISLSFYNWDGMGEKTWVGFGNYVELFDSDAFYTSLKNNLLWLIFYMLAPPLGLLIAL
HHHHEEEEEECCCCCCCEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
FLNQQVKGIRIVKSLFFFPFVISQVVVGLVFAWFYDPSFGLFNIAIGALGFEPVAILANE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECC
DYVTFGIIAAGLWPQIAYCMILYMTGLNNLDAEQLEAARLDGAKRLKMLWYVVLPQLRPA
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHH
TFIAIVVTIIGALRSFDLVATMTAGGPWGSSSVLAYQMYEESIFNYRMGYGAAVSVVLFL
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IMDVYIAYFLWRMLRREK
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMIIVQVSKLGKVECSVKTTYPKSRLPSVRKKRRISAKLSPWLFLAPAMIIFSVYVLYPI
CEEEEEECCCCCEEEEEEECCCHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LSSISLSFYNWDGMGEKTWVGFGNYVELFDSDAFYTSLKNNLLWLIFYMLAPPLGLLIAL
HHHHEEEEEECCCCCCCEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
FLNQQVKGIRIVKSLFFFPFVISQVVVGLVFAWFYDPSFGLFNIAIGALGFEPVAILANE
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECC
DYVTFGIIAAGLWPQIAYCMILYMTGLNNLDAEQLEAARLDGAKRLKMLWYVVLPQLRPA
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHH
TFIAIVVTIIGALRSFDLVATMTAGGPWGSSSVLAYQMYEESIFNYRMGYGAAVSVVLFL
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IMDVYIAYFLWRMLRREK
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]