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The map label for this gene is ugpA [C]

Identifier: 119945645

GI number: 119945645

Start: 2380776

End: 2381675

Strand: Direct

Name: ugpA [C]

Synonym: Ping_1957

Alternate gene names: 119945645

Gene position: 2380776-2381675 (Clockwise)

Preceding gene: 119945644

Following gene: 119945646

Centisome position: 52.21

GC content: 44.22

Gene sequence:

>900_bases
GTGAAGAAAAAATCCAGCGCCCCGCGTCAATCCCTTGGGAACTTTTTACCAAAACTAGTAGTGGCGCCTACTTTTGTCGT
TGCAGTTATTTTTATCTACGGTTTTATGTTTTTAAATGCGTGGTTATCCTTTAGCTCATCACGTCTGTTGCCAACCTATG
ATTGGGCCGGCACGATACAATACGAAAAACTATTCGCCAATGATCGCTGGTGGGTAGCCGCTGAAAACCTCATGCTGTTT
GGTGGTTTGTTCATTGTTATCTGTTTACTGCTTGGATTATTTCTGGCCATTTTTTTGGATCAGAAAATTCGTGCTGAAGG
TGCTATTCGCACTATCTATTTATACCCGATGGCACTTTCCTTTATTGTCACCGGTACTGCTTGGAAATGGATTTTGAATC
CTGAACTGGGTGTTCAACGTTTGGTACGCGAAATGGGCTTTGAATCCTTCACCTTTGACTGGCTGGTCAATACCGAAATG
GCGATTTATACCGTTGTTATCGCGGGAGTCTGGCAATCCTCTGGTTTTGTGATGGCACTCTGCCTCGCAGGTTTACGCGG
AATCGATGATAATATTATCAAAGCCGCTAAAGTTGATGGTGCTTCAATGCCGCTCATTTACCGTAAAATAATCATTCCAG
GACTGCGCCCGGTATTTTTTAGTGCATTGATTGTACTGACTCACATTGCTATCAAAAGCTTTGATTTGATTGTTGCCTTA
ACAGGGGGCGGCCCGGGTTTTGCAACCGACGTACCGGCTACCTTTATGTATACTTATTCCTTTACTCGCGGACAAATCGG
GCTTGGGTCGGCAGCTTCGATGATGATGTTAATGGCAGTCGCAGCCATTATTGTGCCTTACCTGTATTCGGAACTAAGGG
AGAAGAAAGATGAGCATTAA

Upstream 100 bases:

>100_bases
CTAAATACTAAATAAGGTCTGATCCTTTAGACCTGTTGGATCTCAGCGTATTTCAGCTGAGATCCGATTATTGTTTTTTG
CTGTACAGGAGATTAATCTA

Downstream 100 bases:

>100_bases
TAGAGTATTGATTTATAGCATACTGAGCTTTGTCGCACTTATATATTTAATGCCACTGGTTGTTATGCTCATCACTTCGC
TCAAGGATTTAGATGAAATT

Product: ABC transporter substrate binding inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKKKSSAPRQSLGNFLPKLVVAPTFVVAVIFIYGFMFLNAWLSFSSSRLLPTYDWAGTIQYEKLFANDRWWVAAENLMLF
GGLFIVICLLLGLFLAIFLDQKIRAEGAIRTIYLYPMALSFIVTGTAWKWILNPELGVQRLVREMGFESFTFDWLVNTEM
AIYTVVIAGVWQSSGFVMALCLAGLRGIDDNIIKAAKVDGASMPLIYRKIIIPGLRPVFFSALIVLTHIAIKSFDLIVAL
TGGGPGFATDVPATFMYTYSFTRGQIGLGSAASMMMLMAVAAIIVPYLYSELREKKDEH

Sequences:

>Translated_299_residues
MKKKSSAPRQSLGNFLPKLVVAPTFVVAVIFIYGFMFLNAWLSFSSSRLLPTYDWAGTIQYEKLFANDRWWVAAENLMLF
GGLFIVICLLLGLFLAIFLDQKIRAEGAIRTIYLYPMALSFIVTGTAWKWILNPELGVQRLVREMGFESFTFDWLVNTEM
AIYTVVIAGVWQSSGFVMALCLAGLRGIDDNIIKAAKVDGASMPLIYRKIIIPGLRPVFFSALIVLTHIAIKSFDLIVAL
TGGGPGFATDVPATFMYTYSFTRGQIGLGSAASMMMLMAVAAIIVPYLYSELREKKDEH
>Mature_299_residues
MKKKSSAPRQSLGNFLPKLVVAPTFVVAVIFIYGFMFLNAWLSFSSSRLLPTYDWAGTIQYEKLFANDRWWVAAENLMLF
GGLFIVICLLLGLFLAIFLDQKIRAEGAIRTIYLYPMALSFIVTGTAWKWILNPELGVQRLVREMGFESFTFDWLVNTEM
AIYTVVIAGVWQSSGFVMALCLAGLRGIDDNIIKAAKVDGASMPLIYRKIIIPGLRPVFFSALIVLTHIAIKSFDLIVAL
TGGGPGFATDVPATFMYTYSFTRGQIGLGSAASMMMLMAVAAIIVPYLYSELREKKDEH

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=286, Percent_Identity=27.6223776223776, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33281; Mature: 33281

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSSAPRQSLGNFLPKLVVAPTFVVAVIFIYGFMFLNAWLSFSSSRLLPTYDWAGTIQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
YEKLFANDRWWVAAENLMLFGGLFIVICLLLGLFLAIFLDQKIRAEGAIRTIYLYPMALS
HHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
FIVTGTAWKWILNPELGVQRLVREMGFESFTFDWLVNTEMAIYTVVIAGVWQSSGFVMAL
HHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEHEEECCHHHHHHHHHHHHHCCCCHHHHH
CLAGLRGIDDNIIKAAKVDGASMPLIYRKIIIPGLRPVFFSALIVLTHIAIKSFDLIVAL
HHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEEEEE
TGGGPGFATDVPATFMYTYSFTRGQIGLGSAASMMMLMAVAAIIVPYLYSELREKKDEH
ECCCCCCCCCCCHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKKSSAPRQSLGNFLPKLVVAPTFVVAVIFIYGFMFLNAWLSFSSSRLLPTYDWAGTIQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
YEKLFANDRWWVAAENLMLFGGLFIVICLLLGLFLAIFLDQKIRAEGAIRTIYLYPMALS
HHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
FIVTGTAWKWILNPELGVQRLVREMGFESFTFDWLVNTEMAIYTVVIAGVWQSSGFVMAL
HHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEHEEECCHHHHHHHHHHHHHCCCCHHHHH
CLAGLRGIDDNIIKAAKVDGASMPLIYRKIIIPGLRPVFFSALIVLTHIAIKSFDLIVAL
HHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEEEEEEE
TGGGPGFATDVPATFMYTYSFTRGQIGLGSAASMMMLMAVAAIIVPYLYSELREKKDEH
ECCCCCCCCCCCHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]