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The map label for this gene is 119945644

Identifier: 119945644

GI number: 119945644

Start: 2379433

End: 2380686

Strand: Direct

Name: 119945644

Synonym: Ping_1956

Alternate gene names: NA

Gene position: 2379433-2380686 (Clockwise)

Preceding gene: 119945640

Following gene: 119945645

Centisome position: 52.19

GC content: 44.74

Gene sequence:

>1254_bases
ATGAAAATTTCAAAACTATTTTTAAGTATTTCATTAGCATTGGGCCTAACAGCCGGTGCTCAAGCAGCTGAAATCGAAGT
ACTGCACTATTGGACTTCAGGGGGTGAAGCTAAATCTGTTGCCGAACTGAAAAAAATGTTAGAAGCAAAAGGACATGACT
GGAAAGACTTCGCAGTGGCAGGTGGTGGTGGTGAAAGTGCCATGACAGTACTAAAAACACGTGTCGTTTCAGGTAACCCA
CCAGCAGCCGCACAAATCAAAGGGCCAAGTATTCAGGAATGGGGTGACGAAGGCGTATTAGCTAACCTTAGCGCTGTCGC
TCAGGCCGAAGGCTGGGATGACTTGCTACCCGGTGTTGTGGCAGATGTTATGAAGTATGACGGTAAATATGTAGCCGTTC
CCGTTAACGTACACCGTGTAAACTGGATGTGGGTAAACCCTGAAGTCTTTAAAAAAGCCGGTGCAAACGTACCAACAACC
TGGAAGGAATTCTTTGTTGCTGCTGATAAAATTAAAGCCGCGGGCATGACGGCTGTTGCCCATGGTGGACAACCTTGGCA
AGATGCAACCATGTTTGAATCTGTTGTGCTAGGTGTTGCGGGTGCTGAGTTTTATAAGCAGGCATTTGTTGAATTAGACC
CTGAAGCTTTAAACAGCCCAACCATGATTGATGCACTGAAGACGTTCCATAAAATCAAGAACTATACCGATGCAGGATCG
CCAGGACGTGACTGGAATCTGGCCACAGCCATGGTTATCAATGGTGAAGCCGGTATGCAGTTTATGGGAGACTGGGCAAA
AGGTGAATTTACTGCCGCCGGTAAAGTACCGGGTAAAGACTATATCTGTACTGCTGCACCGGGTACATCTGGCGATTTCA
CCTTTAACATCGACAGTTTTGTGATGTTTAATCTGGAAGACAAAGAACAGCGTAAAGGTCAAAATGATCTGGCCAGCACT
ATCCTAAGCGTTCCTTTTCAGGAAGTCTTTAACCTTAATAAAGGATCAATTCCTGCGCGTTTGAATATGTCCATGGATAA
GTTTGATGATTGTGCAAAACTGTCGGCAAAAGATTTTGTCAAAACAGCTAAAGCAAATACGTTAGTGCCAAGTATGGCGC
ACGGTATGTCAACCTTCTCTTCAACCCAAGGTGCTATCTACGACACTGTTACTGAGTTCTACAACTCAGATTCAATTAGC
GCAGAAGAAGCAGCAGAAAAACTAGTAAAAGCAGTCGCAGCAGCTAAATACTAA

Upstream 100 bases:

>100_bases
ATAACTGACCTCGCTTTTATTGTTAAATAACGGCTCTTTGGTAAGTTCCAATCTGATCAGCAGTTCGGCTGTCAGATAAT
TTTAGTCAAGGGAATATCAC

Downstream 100 bases:

>100_bases
ATAAGGTCTGATCCTTTAGACCTGTTGGATCTCAGCGTATTTCAGCTGAGATCCGATTATTGTTTTTTGCTGTACAGGAG
ATTAATCTAGTGAAGAAAAA

Product: sugar ABC transporter extracellular solute-binding family 1 protein

Products: NA

Alternate protein names: Immunogenic 39 kDa protein; P39 [H]

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MKISKLFLSISLALGLTAGAQAAEIEVLHYWTSGGEAKSVAELKKMLEAKGHDWKDFAVAGGGGESAMTVLKTRVVSGNP
PAAAQIKGPSIQEWGDEGVLANLSAVAQAEGWDDLLPGVVADVMKYDGKYVAVPVNVHRVNWMWVNPEVFKKAGANVPTT
WKEFFVAADKIKAAGMTAVAHGGQPWQDATMFESVVLGVAGAEFYKQAFVELDPEALNSPTMIDALKTFHKIKNYTDAGS
PGRDWNLATAMVINGEAGMQFMGDWAKGEFTAAGKVPGKDYICTAAPGTSGDFTFNIDSFVMFNLEDKEQRKGQNDLAST
ILSVPFQEVFNLNKGSIPARLNMSMDKFDDCAKLSAKDFVKTAKANTLVPSMAHGMSTFSSTQGAIYDTVTEFYNSDSIS
AEEAAEKLVKAVAAAKY

Sequences:

>Translated_417_residues
MKISKLFLSISLALGLTAGAQAAEIEVLHYWTSGGEAKSVAELKKMLEAKGHDWKDFAVAGGGGESAMTVLKTRVVSGNP
PAAAQIKGPSIQEWGDEGVLANLSAVAQAEGWDDLLPGVVADVMKYDGKYVAVPVNVHRVNWMWVNPEVFKKAGANVPTT
WKEFFVAADKIKAAGMTAVAHGGQPWQDATMFESVVLGVAGAEFYKQAFVELDPEALNSPTMIDALKTFHKIKNYTDAGS
PGRDWNLATAMVINGEAGMQFMGDWAKGEFTAAGKVPGKDYICTAAPGTSGDFTFNIDSFVMFNLEDKEQRKGQNDLAST
ILSVPFQEVFNLNKGSIPARLNMSMDKFDDCAKLSAKDFVKTAKANTLVPSMAHGMSTFSSTQGAIYDTVTEFYNSDSIS
AEEAAEKLVKAVAAAKY
>Mature_417_residues
MKISKLFLSISLALGLTAGAQAAEIEVLHYWTSGGEAKSVAELKKMLEAKGHDWKDFAVAGGGGESAMTVLKTRVVSGNP
PAAAQIKGPSIQEWGDEGVLANLSAVAQAEGWDDLLPGVVADVMKYDGKYVAVPVNVHRVNWMWVNPEVFKKAGANVPTT
WKEFFVAADKIKAAGMTAVAHGGQPWQDATMFESVVLGVAGAEFYKQAFVELDPEALNSPTMIDALKTFHKIKNYTDAGS
PGRDWNLATAMVINGEAGMQFMGDWAKGEFTAAGKVPGKDYICTAAPGTSGDFTFNIDSFVMFNLEDKEQRKGQNDLAST
ILSVPFQEVFNLNKGSIPARLNMSMDKFDDCAKLSAKDFVKTAKANTLVPSMAHGMSTFSSTQGAIYDTVTEFYNSDSIS
AEEAAEKLVKAVAAAKY

Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 44703; Mature: 44703

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISKLFLSISLALGLTAGAQAAEIEVLHYWTSGGEAKSVAELKKMLEAKGHDWKDFAVA
CCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEE
GGGGESAMTVLKTRVVSGNPPAAAQIKGPSIQEWGDEGVLANLSAVAQAEGWDDLLPGVV
CCCCHHHHHHHHHHEECCCCCCCEEECCCCHHHCCCCCCEEHHHHHHHCCCCHHHHHHHH
ADVMKYDGKYVAVPVNVHRVNWMWVNPEVFKKAGANVPTTWKEFFVAADKIKAAGMTAVA
HHHHHCCCCEEEEEEEEEEEEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEE
HGGQPWQDATMFESVVLGVAGAEFYKQAFVELDPEALNSPTMIDALKTFHKIKNYTDAGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCC
PGRDWNLATAMVINGEAGMQFMGDWAKGEFTAAGKVPGKDYICTAAPGTSGDFTFNIDSF
CCCCCCEEEEEEEECCCCCHHHCCCCCCCEEECCCCCCCCEEEECCCCCCCCEEEEECCE
VMFNLEDKEQRKGQNDLASTILSVPFQEVFNLNKGSIPARLNMSMDKFDDCAKLSAKDFV
EEEECCCHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCEEECCCHHHHHHHHHCCHHHHH
KTAKANTLVPSMAHGMSTFSSTQGAIYDTVTEFYNSDSISAEEAAEKLVKAVAAAKY
HHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKISKLFLSISLALGLTAGAQAAEIEVLHYWTSGGEAKSVAELKKMLEAKGHDWKDFAVA
CCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEE
GGGGESAMTVLKTRVVSGNPPAAAQIKGPSIQEWGDEGVLANLSAVAQAEGWDDLLPGVV
CCCCHHHHHHHHHHEECCCCCCCEEECCCCHHHCCCCCCEEHHHHHHHCCCCHHHHHHHH
ADVMKYDGKYVAVPVNVHRVNWMWVNPEVFKKAGANVPTTWKEFFVAADKIKAAGMTAVA
HHHHHCCCCEEEEEEEEEEEEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEE
HGGQPWQDATMFESVVLGVAGAEFYKQAFVELDPEALNSPTMIDALKTFHKIKNYTDAGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCC
PGRDWNLATAMVINGEAGMQFMGDWAKGEFTAAGKVPGKDYICTAAPGTSGDFTFNIDSF
CCCCCCEEEEEEEECCCCCHHHCCCCCCCEEECCCCCCCCEEEECCCCCCCCEEEEECCE
VMFNLEDKEQRKGQNDLASTILSVPFQEVFNLNKGSIPARLNMSMDKFDDCAKLSAKDFV
EEEECCCHHHHCCHHHHHHHHHHCCHHHHHCCCCCCCCEEECCCHHHHHHHHHCCHHHHH
KTAKANTLVPSMAHGMSTFSSTQGAIYDTVTEFYNSDSISAEEAAEKLVKAVAAAKY
HHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9009303; 10235622 [H]