| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945532
Identifier: 119945532
GI number: 119945532
Start: 2228522
End: 2229076
Strand: Direct
Name: 119945532
Synonym: Ping_1836
Alternate gene names: NA
Gene position: 2228522-2229076 (Clockwise)
Preceding gene: 119945528
Following gene: 119945533
Centisome position: 48.88
GC content: 35.86
Gene sequence:
>555_bases ATGAGCTCAGCGTTAAAAGAACAAAAAGAAACTATCTTACAATACTTAGAGACAACACATTACATCGAGTCTAATGCACC AAAAGCAGAAGAGAAGCGAGAAGCTAAGTATAAGATTGGTAAAGCATGCAACAAAGCAAGAGAGATCCTTTGCAGTGATG ACGCTTTTCTTGATTGGGTATGGTCAAACGTTATCGCTGAATGTTCAACGGATATTGAAGAGGTGACGCCTAATACACTG ATTTCTTGGCGTCTGTTGCCTAAATTTGGCACATTAGAGCAATGTGAAATAGTTGGTTTCACCCATATTTCTAAGCTATT GCTCGATAAAAATGCAGCAATGAAAGCGGAAGTGTTAGATATTATTGCCAATAATGATCCTGAAACGGCTAATAAATTAA TCAAAATGGTACTTAAGCCAGCCATTGATTTTACGCCAATTGTTGCTAACAAAAAGAATCTGTCTGATACCGTTAATAAG GCTGATAAGTTATCAAAAGATGCACTAGTAGCTTTAGTTAAAGCCATGCATCAAAAAATGATAAGTAATAAATAA
Upstream 100 bases:
>100_bases CAAAGGGGCCATATTTCTAGATTCTTTGTTTTGGTAAGATACACTGCGCTTAATTCGTCAAGACACCCAATAATGAGGTG TTATAAAATAGGTATACTCA
Downstream 100 bases:
>100_bases CTAAATGTTAGCCCGTAATATTTCTCAGTTAACCGGGCGTTAATATGTATTGCAGAATTTATTTCTCATTCGGTTTAGGG CACCAAGCGCCTCAGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSSALKEQKETILQYLETTHYIESNAPKAEEKREAKYKIGKACNKAREILCSDDAFLDWVWSNVIAECSTDIEEVTPNTL ISWRLLPKFGTLEQCEIVGFTHISKLLLDKNAAMKAEVLDIIANNDPETANKLIKMVLKPAIDFTPIVANKKNLSDTVNK ADKLSKDALVALVKAMHQKMISNK
Sequences:
>Translated_184_residues MSSALKEQKETILQYLETTHYIESNAPKAEEKREAKYKIGKACNKAREILCSDDAFLDWVWSNVIAECSTDIEEVTPNTL ISWRLLPKFGTLEQCEIVGFTHISKLLLDKNAAMKAEVLDIIANNDPETANKLIKMVLKPAIDFTPIVANKKNLSDTVNK ADKLSKDALVALVKAMHQKMISNK >Mature_183_residues SSALKEQKETILQYLETTHYIESNAPKAEEKREAKYKIGKACNKAREILCSDDAFLDWVWSNVIAECSTDIEEVTPNTLI SWRLLPKFGTLEQCEIVGFTHISKLLLDKNAAMKAEVLDIIANNDPETANKLIKMVLKPAIDFTPIVANKKNLSDTVNKA DKLSKDALVALVKAMHQKMISNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20649; Mature: 20518
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSALKEQKETILQYLETTHYIESNAPKAEEKREAKYKIGKACNKAREILCSDDAFLDWV CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH WSNVIAECSTDIEEVTPNTLISWRLLPKFGTLEQCEIVGFTHISKLLLDKNAAMKAEVLD HHHHHHHHHCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IIANNDPETANKLIKMVLKPAIDFTPIVANKKNLSDTVNKADKLSKDALVALVKAMHQKM HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISNK HCCC >Mature Secondary Structure SSALKEQKETILQYLETTHYIESNAPKAEEKREAKYKIGKACNKAREILCSDDAFLDWV CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH WSNVIAECSTDIEEVTPNTLISWRLLPKFGTLEQCEIVGFTHISKLLLDKNAAMKAEVLD HHHHHHHHHCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IIANNDPETANKLIKMVLKPAIDFTPIVANKKNLSDTVNKADKLSKDALVALVKAMHQKM HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISNK HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA