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The map label for this gene is 119945228

Identifier: 119945228

GI number: 119945228

Start: 1841378

End: 1842496

Strand: Direct

Name: 119945228

Synonym: Ping_1494

Alternate gene names: NA

Gene position: 1841378-1842496 (Clockwise)

Preceding gene: 119945226

Following gene: 119945229

Centisome position: 40.38

GC content: 36.46

Gene sequence:

>1119_bases
ATGAATAAACCCCGTATTCTTTGGCTTAATGTTTTGTTCTTTTTGAGCACTTTTTTATTAGCCGCAATTGCCGTACCTTA
CCGTGCTATCACGCATGGTTTTGATGCGTCCGAAATTATGTTTGCACTCTTATGTTTTATTTTCTGTGGCATGTCCATTA
CGGCAGGCTATCATAGATTGTGGTCACACAAAACTTATCAGGCACATTGGAGTTTACGTTTTATTTTTGCCTTAGGCGGT
GCATTCGCTTTACAAAACAGCATATTGCATTGGTCATCGGATCATCGAATTCATCATAAGCATGTTGATAATAATGATAA
AGATCCCTATTCCGCTAAAATGGGATTTTGGTATTCACACCTTGGCTGGATGCTGCGTGAATATCATCCAACTACTTATG
ACGACTATAATAACGTGCGAGATTTGCAAAAAGATCCTATCGTAATATGGCAGCATAAGTATTATTTGTTGTTAACACTG
CTGCTAAATATTGGCATACCGTTATTTTTTGGTTTTTGGCATGGTGATATCATTAACAGCATCCTATTAGTGGGGTTTTT
ACGTTTAGTGTTAAGTCACCATACCACTTTCTTTATCAACTCATTAGCGCATATCTGGGGGAAACAAACCTATAGCGATA
AAAACAGTGCAAGGGATAATGGTTTTTTGGCCTTTCTTACCTTTGGTGAGGGCTACCATAACTTTCACCATATTTTTGAA
AATGATTATCGGAATGGTATCCGTTGGTGGCAATTTGATCCGACTAAATGGTTGATAAAAAGTTGTGAATATCTGGGGCT
GACCAGTAAATTACGCATCAGTCCTGAAGATCGGTTGGAAAAAGCTAAATTAGCCATGACCTTAAAGCGCAGTCAACAAA
AATTAGCAACATACCCTAATCCGGAAAAAATGCTTGAACGTTTACAATCCGAATATGATCTGCTTATTGTTAAAATAAAT
GAGTATTATGCCGTACATAAACAATTGTTGTCAGAAAGAAAAAAAGAACTTGTGAATGATGTTGAAAATTCAGAGTTAAT
AAAAACCTGTCTGGAATTAAAAAAATGTGTAGCAGAGCAGCAACGCAGTTGGAAATTATTAACCGCTAAATTTGTTTAA

Upstream 100 bases:

>100_bases
AAAAATACGCTGCGTACCTGAGTATTATGTTAGGATGAATGCAAGGTGTACATCTGTACGCTGAATTTTTCTTTTTTATA
TTTGCCGAGTTGGAGGCGAA

Downstream 100 bases:

>100_bases
TGACCTTGGGTTCAAAGTATCATTAATATTATTAGAGTAAGCTTATCAATTAAGTGATCGATTCAACCAATCCTCTGACT
CTTTGAGGGGGTTGAATCGG

Product: stearoyl-CoA 9-desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Domain Protein; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Family Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Protein; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase; Stearoyl/Acyl-CoA Desaturase

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MNKPRILWLNVLFFLSTFLLAAIAVPYRAITHGFDASEIMFALLCFIFCGMSITAGYHRLWSHKTYQAHWSLRFIFALGG
AFALQNSILHWSSDHRIHHKHVDNNDKDPYSAKMGFWYSHLGWMLREYHPTTYDDYNNVRDLQKDPIVIWQHKYYLLLTL
LLNIGIPLFFGFWHGDIINSILLVGFLRLVLSHHTTFFINSLAHIWGKQTYSDKNSARDNGFLAFLTFGEGYHNFHHIFE
NDYRNGIRWWQFDPTKWLIKSCEYLGLTSKLRISPEDRLEKAKLAMTLKRSQQKLATYPNPEKMLERLQSEYDLLIVKIN
EYYAVHKQLLSERKKELVNDVENSELIKTCLELKKCVAEQQRSWKLLTAKFV

Sequences:

>Translated_372_residues
MNKPRILWLNVLFFLSTFLLAAIAVPYRAITHGFDASEIMFALLCFIFCGMSITAGYHRLWSHKTYQAHWSLRFIFALGG
AFALQNSILHWSSDHRIHHKHVDNNDKDPYSAKMGFWYSHLGWMLREYHPTTYDDYNNVRDLQKDPIVIWQHKYYLLLTL
LLNIGIPLFFGFWHGDIINSILLVGFLRLVLSHHTTFFINSLAHIWGKQTYSDKNSARDNGFLAFLTFGEGYHNFHHIFE
NDYRNGIRWWQFDPTKWLIKSCEYLGLTSKLRISPEDRLEKAKLAMTLKRSQQKLATYPNPEKMLERLQSEYDLLIVKIN
EYYAVHKQLLSERKKELVNDVENSELIKTCLELKKCVAEQQRSWKLLTAKFV
>Mature_372_residues
MNKPRILWLNVLFFLSTFLLAAIAVPYRAITHGFDASEIMFALLCFIFCGMSITAGYHRLWSHKTYQAHWSLRFIFALGG
AFALQNSILHWSSDHRIHHKHVDNNDKDPYSAKMGFWYSHLGWMLREYHPTTYDDYNNVRDLQKDPIVIWQHKYYLLLTL
LLNIGIPLFFGFWHGDIINSILLVGFLRLVLSHHTTFFINSLAHIWGKQTYSDKNSARDNGFLAFLTFGEGYHNFHHIFE
NDYRNGIRWWQFDPTKWLIKSCEYLGLTSKLRISPEDRLEKAKLAMTLKRSQQKLATYPNPEKMLERLQSEYDLLIVKIN
EYYAVHKQLLSERKKELVNDVENSELIKTCLELKKCVAEQQRSWKLLTAKFV

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148596961, Length=249, Percent_Identity=35.7429718875502, Blast_Score=175, Evalue=8e-44,
Organism=Homo sapiens, GI53759151, Length=258, Percent_Identity=31.3953488372093, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI148596938, Length=152, Percent_Identity=36.1842105263158, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17561776, Length=296, Percent_Identity=33.7837837837838, Blast_Score=171, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI17540878, Length=281, Percent_Identity=34.5195729537367, Blast_Score=162, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17561774, Length=312, Percent_Identity=30.4487179487179, Blast_Score=150, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6321383, Length=244, Percent_Identity=43.4426229508197, Blast_Score=221, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24646500, Length=295, Percent_Identity=33.5593220338983, Blast_Score=164, Evalue=7e-41,
Organism=Drosophila melanogaster, GI24646303, Length=246, Percent_Identity=34.5528455284553, Blast_Score=161, Evalue=5e-40,
Organism=Drosophila melanogaster, GI24646299, Length=246, Percent_Identity=34.5528455284553, Blast_Score=161, Evalue=5e-40,
Organism=Drosophila melanogaster, GI24646305, Length=246, Percent_Identity=34.5528455284553, Blast_Score=161, Evalue=5e-40,
Organism=Drosophila melanogaster, GI24646301, Length=246, Percent_Identity=34.5528455284553, Blast_Score=161, Evalue=5e-40,
Organism=Drosophila melanogaster, GI24646297, Length=246, Percent_Identity=34.5528455284553, Blast_Score=161, Evalue=5e-40,
Organism=Drosophila melanogaster, GI24646295, Length=245, Percent_Identity=33.0612244897959, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI21358573, Length=242, Percent_Identity=35.1239669421488, Blast_Score=154, Evalue=6e-38,
Organism=Drosophila melanogaster, GI24662393, Length=285, Percent_Identity=30.1754385964912, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI21358571, Length=202, Percent_Identity=34.6534653465347, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI161079187, Length=252, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24651333, Length=251, Percent_Identity=28.6852589641434, Blast_Score=82, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43974; Mature: 43974

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPRILWLNVLFFLSTFLLAAIAVPYRAITHGFDASEIMFALLCFIFCGMSITAGYHRL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
WSHKTYQAHWSLRFIFALGGAFALQNSILHWSSDHRIHHKHVDNNDKDPYSAKMGFWYSH
HCCCCEEHHHHEEHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHH
LGWMLREYHPTTYDDYNNVRDLQKDPIVIWQHKYYLLLTLLLNIGIPLFFGFWHGDIINS
HHHHHHHCCCCCCCCCHHHHHHCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ILLVGFLRLVLSHHTTFFINSLAHIWGKQTYSDKNSARDNGFLAFLTFGEGYHNFHHIFE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
NDYRNGIRWWQFDPTKWLIKSCEYLGLTSKLRISPEDRLEKAKLAMTLKRSQQKLATYPN
HHHCCCCEEEEECHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCC
PEKMLERLQSEYDLLIVKINEYYAVHKQLLSERKKELVNDVENSELIKTCLELKKCVAEQ
HHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QRSWKLLTAKFV
HHCCCHHEEECC
>Mature Secondary Structure
MNKPRILWLNVLFFLSTFLLAAIAVPYRAITHGFDASEIMFALLCFIFCGMSITAGYHRL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
WSHKTYQAHWSLRFIFALGGAFALQNSILHWSSDHRIHHKHVDNNDKDPYSAKMGFWYSH
HCCCCEEHHHHEEHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHH
LGWMLREYHPTTYDDYNNVRDLQKDPIVIWQHKYYLLLTLLLNIGIPLFFGFWHGDIINS
HHHHHHHCCCCCCCCCHHHHHHCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ILLVGFLRLVLSHHTTFFINSLAHIWGKQTYSDKNSARDNGFLAFLTFGEGYHNFHHIFE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHH
NDYRNGIRWWQFDPTKWLIKSCEYLGLTSKLRISPEDRLEKAKLAMTLKRSQQKLATYPN
HHHCCCCEEEEECHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCC
PEKMLERLQSEYDLLIVKINEYYAVHKQLLSERKKELVNDVENSELIKTCLELKKCVAEQ
HHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QRSWKLLTAKFV
HHCCCHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA