| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945226
Identifier: 119945226
GI number: 119945226
Start: 1839430
End: 1840473
Strand: Direct
Name: 119945226
Synonym: Ping_1492
Alternate gene names: NA
Gene position: 1839430-1840473 (Clockwise)
Preceding gene: 119945225
Following gene: 119945228
Centisome position: 40.34
GC content: 36.3
Gene sequence:
>1044_bases ATGAACATACTTTATGGCATTCAAGGTACAGGAAATGGGCACGTGGCGCGAAGCAGGGTAATTGCTAAATATATAGCCGA AAGTGATGCTAAGGTTACCTACTTATTCTCTGGTCGCGACAAAAATCAATATTACGAAATGGAGGTATTTAACGATCACC TGATTCGCGAAGGATTAACTTTTGTTAGTGAAGGCGGGAAAGTTAATTATGTGCAGACCACATTAAAAAATAATTTATGG CAATTTCTTAAAGATGTTTTTTCATTAGATCTTAGCAGCTATGATTTAATCATTACAGACTTTGAGCCGATCACGGCCTG GGCTGCCAAATTAAGAAATAAACCAATTATTGGGCTGGGTCATCAATATGCCTTTGGTCCCAATACACCGCTTGCTGGAG AAAATTGGCTGGCAAAATGGGTGCTAAAAAACTTTGCTCCCGCACCATTCGGCATTGGTTTACATTGGCATCCATATCAA GAAAATATATTACCACCGATTATTGACATTAATTTATCCCGTAAAATCACCCAAAATTTTATTATGGTGTATTTACCTTT TGAAGATCAATCAGAGGTGACTGATTTATTAAATACATTTAGCGATTATAATTTTATTCTTTACTCTCCACAGCTAACTG AAATACAGCATGGAAATGTACTATGGCAAAAGACCTGTTATCAAGGTTTTACTAATAATTTGACCCAAACCCGAGGCGTT ATTTGCAATTCTGGATTTGAATTGATCAGTGAATGTTTACACTTGGGCATTCCAATATTAGTAAAACCAATTCATGGACA AATGGAACAGCTTTCCAACGCCCTTGCACTTAAACAATTACAGCTCGCAGATGTAATGCATCATTTAGATGAAGATTTAA TCGGCAATTGGTTAGAGATGTTAGATGATGATATTCAACATAAACCTCAATTAATTCCTAATGTGGCAAAAGAAATTGTT GCTTTGATCATGGCAAAAAATTGGGAAAAAACAAATGAGTTGAGCGAAACCCTGTGGAAAACGCCTATATTTCAAGCACG TTGA
Upstream 100 bases:
>100_bases CTGTGGCGATATCTCGCGTTATTTTGGGAGTGCATTTTCCAACCGATATTTTAGCGGGTGCACTTATAGGTACAATTTTA GTTTATATAATGGTGGCACT
Downstream 100 bases:
>100_bases TTTACCAACCTGTTGATCTTTCGATACTGTCACAGCCCGCAGGCTCGAAGGCTCGAAGCTCGCAACCAGCAGCTCAATCT ACCGGGATAAGTTCATCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Teichoic Acid Biosynthesis Related Protein; Glycosyltransferase-Distantly-Related Protein; Glycosyltransferase; Glycosyl Transferase Gt1A; Glycosyltransferase Family 1 Domain Protein; Glycosyl Transferase Family Protein; UDP-Glucuronosyltransferase-Like Protein
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MNILYGIQGTGNGHVARSRVIAKYIAESDAKVTYLFSGRDKNQYYEMEVFNDHLIREGLTFVSEGGKVNYVQTTLKNNLW QFLKDVFSLDLSSYDLIITDFEPITAWAAKLRNKPIIGLGHQYAFGPNTPLAGENWLAKWVLKNFAPAPFGIGLHWHPYQ ENILPPIIDINLSRKITQNFIMVYLPFEDQSEVTDLLNTFSDYNFILYSPQLTEIQHGNVLWQKTCYQGFTNNLTQTRGV ICNSGFELISECLHLGIPILVKPIHGQMEQLSNALALKQLQLADVMHHLDEDLIGNWLEMLDDDIQHKPQLIPNVAKEIV ALIMAKNWEKTNELSETLWKTPIFQAR
Sequences:
>Translated_347_residues MNILYGIQGTGNGHVARSRVIAKYIAESDAKVTYLFSGRDKNQYYEMEVFNDHLIREGLTFVSEGGKVNYVQTTLKNNLW QFLKDVFSLDLSSYDLIITDFEPITAWAAKLRNKPIIGLGHQYAFGPNTPLAGENWLAKWVLKNFAPAPFGIGLHWHPYQ ENILPPIIDINLSRKITQNFIMVYLPFEDQSEVTDLLNTFSDYNFILYSPQLTEIQHGNVLWQKTCYQGFTNNLTQTRGV ICNSGFELISECLHLGIPILVKPIHGQMEQLSNALALKQLQLADVMHHLDEDLIGNWLEMLDDDIQHKPQLIPNVAKEIV ALIMAKNWEKTNELSETLWKTPIFQAR >Mature_347_residues MNILYGIQGTGNGHVARSRVIAKYIAESDAKVTYLFSGRDKNQYYEMEVFNDHLIREGLTFVSEGGKVNYVQTTLKNNLW QFLKDVFSLDLSSYDLIITDFEPITAWAAKLRNKPIIGLGHQYAFGPNTPLAGENWLAKWVLKNFAPAPFGIGLHWHPYQ ENILPPIIDINLSRKITQNFIMVYLPFEDQSEVTDLLNTFSDYNFILYSPQLTEIQHGNVLWQKTCYQGFTNNLTQTRGV ICNSGFELISECLHLGIPILVKPIHGQMEQLSNALALKQLQLADVMHHLDEDLIGNWLEMLDDDIQHKPQLIPNVAKEIV ALIMAKNWEKTNELSETLWKTPIFQAR
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39708; Mature: 39708
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILYGIQGTGNGHVARSRVIAKYIAESDAKVTYLFSGRDKNQYYEMEVFNDHLIREGLT CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHH FVSEGGKVNYVQTTLKNNLWQFLKDVFSLDLSSYDLIITDFEPITAWAAKLRNKPIIGLG HHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCEEECC HQYAFGPNTPLAGENWLAKWVLKNFAPAPFGIGLHWHPYQENILPPIIDINLSRKITQNF CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCHHCCCCCEEECCCCHHHCCCE IMVYLPFEDQSEVTDLLNTFSDYNFILYSPQLTEIQHGNVLWQKTCYQGFTNNLTQTRGV EEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCEECCCCCHHHHHHHHHHHCCHHHHCCE ICNSGFELISECLHLGIPILVKPIHGQMEQLSNALALKQLQLADVMHHLDEDLIGNWLEM EECCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDDDIQHKPQLIPNVAKEIVALIMAKNWEKTNELSETLWKTPIFQAR HHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNILYGIQGTGNGHVARSRVIAKYIAESDAKVTYLFSGRDKNQYYEMEVFNDHLIREGLT CCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHH FVSEGGKVNYVQTTLKNNLWQFLKDVFSLDLSSYDLIITDFEPITAWAAKLRNKPIIGLG HHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCEEECC HQYAFGPNTPLAGENWLAKWVLKNFAPAPFGIGLHWHPYQENILPPIIDINLSRKITQNF CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCHHCCCCCEEECCCCHHHCCCE IMVYLPFEDQSEVTDLLNTFSDYNFILYSPQLTEIQHGNVLWQKTCYQGFTNNLTQTRGV EEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCEECCCCCHHHHHHHHHHHCCHHHHCCE ICNSGFELISECLHLGIPILVKPIHGQMEQLSNALALKQLQLADVMHHLDEDLIGNWLEM EECCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDDDIQHKPQLIPNVAKEIVALIMAKNWEKTNELSETLWKTPIFQAR HHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA