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The map label for this gene is yfcM [H]

Identifier: 119945217

GI number: 119945217

Start: 1831654

End: 1832247

Strand: Direct

Name: yfcM [H]

Synonym: Ping_1482

Alternate gene names: 119945217

Gene position: 1831654-1832247 (Clockwise)

Preceding gene: 119945215

Following gene: 119945218

Centisome position: 40.17

GC content: 41.41

Gene sequence:

>594_bases
ATGCTATTGAGAAATGTTGTGCCAGTTTTATTTAATTATCAAGATCTCATCACGCTCTTTAATGACACCTTTAGCGATAA
GTTTAATACCGAATTAATAGCGGGTGAAGATGAGCCTGTCTACTTACCGGCAGACACCCAAAACAGGCAGCACAGAATCG
AGTTTGCACATTGTTTTTATGCCAGTGCATTGCATGAAATCGCGCACTGGTTAGTGGCAGGTGAGCAGCGCCGCTTATTG
GTTGATTATGGCTATTGGTATGAACCCGATGGCCGTGATGCCAAACTTCAAGCAGAATTTGAAAAAGTTGAGATAACACC
ACAGGCAATCGAATGGGTATTGGCGGCAAGTTGTGGTTTTAAATTTGATGTCAGCGTGGATAATCTCAGTGGCGTTAGCA
TTGACCGATTAAGTTTTAAACATAACGTACATCATAGGGTGATGAATTATTTACAAAATGGGTTGTCTGAGCGGGCTATG
TTGCTTATTAACGCCTGTCAGGATTTCTATCATACCCCGGTTTTATCACCTGAATTGTTTAACTATCAGGGACTAGAGAC
TGCAGATGCAAATAATATTGGAACCCGCTTATGA

Upstream 100 bases:

>100_bases
TGACATAATATCTTCTTATTTAAATTGAAATTTAAAGGGTATACCCAAGCTGCCTCCTGAGTGTATAATTTGTTACAAAT
TTTGTCGAATAATTCAACCT

Downstream 100 bases:

>100_bases
ATAAAACTTATCATCATCCGGTGCAGATTTATTACGAAGATACTGACCATTCGGGGGTGGTGTATCACCCTAATTTTCTG
AAGTATTTTGAACGGGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLLRNVVPVLFNYQDLITLFNDTFSDKFNTELIAGEDEPVYLPADTQNRQHRIEFAHCFYASALHEIAHWLVAGEQRRLL
VDYGYWYEPDGRDAKLQAEFEKVEITPQAIEWVLAASCGFKFDVSVDNLSGVSIDRLSFKHNVHHRVMNYLQNGLSERAM
LLINACQDFYHTPVLSPELFNYQGLETADANNIGTRL

Sequences:

>Translated_197_residues
MLLRNVVPVLFNYQDLITLFNDTFSDKFNTELIAGEDEPVYLPADTQNRQHRIEFAHCFYASALHEIAHWLVAGEQRRLL
VDYGYWYEPDGRDAKLQAEFEKVEITPQAIEWVLAASCGFKFDVSVDNLSGVSIDRLSFKHNVHHRVMNYLQNGLSERAM
LLINACQDFYHTPVLSPELFNYQGLETADANNIGTRL
>Mature_197_residues
MLLRNVVPVLFNYQDLITLFNDTFSDKFNTELIAGEDEPVYLPADTQNRQHRIEFAHCFYASALHEIAHWLVAGEQRRLL
VDYGYWYEPDGRDAKLQAEFEKVEITPQAIEWVLAASCGFKFDVSVDNLSGVSIDRLSFKHNVHHRVMNYLQNGLSERAM
LLINACQDFYHTPVLSPELFNYQGLETADANNIGTRL

Specific function: Unknown

COG id: COG3101

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1563 [H]

Homologues:

Organism=Escherichia coli, GI1788666, Length=172, Percent_Identity=54.0697674418605, Blast_Score=204, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007411 [H]

Pfam domain/function: PF04315 DUF462 [H]

EC number: NA

Molecular weight: Translated: 22687; Mature: 22687

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRNVVPVLFNYQDLITLFNDTFSDKFNTELIAGEDEPVYLPADTQNRQHRIEFAHCFY
CCHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHH
ASALHEIAHWLVAGEQRRLLVDYGYWYEPDGRDAKLQAEFEKVEITPQAIEWVLAASCGF
HHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCEEEEEHEEEECCHHHHHHHHHHCCCC
KFDVSVDNLSGVSIDRLSFKHNVHHRVMNYLQNGLSERAMLLINACQDFYHTPVLSPELF
EEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHC
NYQGLETADANNIGTRL
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLLRNVVPVLFNYQDLITLFNDTFSDKFNTELIAGEDEPVYLPADTQNRQHRIEFAHCFY
CCHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHH
ASALHEIAHWLVAGEQRRLLVDYGYWYEPDGRDAKLQAEFEKVEITPQAIEWVLAASCGF
HHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCEEEEEHEEEECCHHHHHHHHHHCCCC
KFDVSVDNLSGVSIDRLSFKHNVHHRVMNYLQNGLSERAMLLINACQDFYHTPVLSPELF
EEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHC
NYQGLETADANNIGTRL
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]