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The map label for this gene is ybgC [C]

Identifier: 119945218

GI number: 119945218

Start: 1832244

End: 1832645

Strand: Direct

Name: ybgC [C]

Synonym: Ping_1483

Alternate gene names: 119945218

Gene position: 1832244-1832645 (Clockwise)

Preceding gene: 119945217

Following gene: 119945220

Centisome position: 40.18

GC content: 41.54

Gene sequence:

>402_bases
ATGAATAAAACTTATCATCATCCGGTGCAGATTTATTACGAAGATACTGACCATTCGGGGGTGGTGTATCACCCTAATTT
TCTGAAGTATTTTGAACGGGCCCGTGAGCATGTGATTGATAGCAATCGGCTGGATAAATTATGGCGTGAGAATGGGCTTG
GTTTTGCAGTCTATAAAGCCAACATGACCTTTCAAGACGGGGTTGAATTTGCTGAAATTTGCGATATTCGCACAACCTAC
CAAATTGATGGCAAGTATAAAACCTTATGGAGACAAGAGGTGTGGCGACCTGGCGCGACTAAAGCGGCTGTTATTGGTGA
TATTGAAATGGTTTGTTTGGATAAGAACAAACGTTTACAACCCCTACCAGAAAGTATTTTAAAGACGCTGCTTGGTGAAT
AA

Upstream 100 bases:

>100_bases
ACGCCTGTCAGGATTTCTATCATACCCCGGTTTTATCACCTGAATTGTTTAACTATCAGGGACTAGAGACTGCAGATGCA
AATAATATTGGAACCCGCTT

Downstream 100 bases:

>100_bases
TATTAAATTTCATCGGATTTATTATTGTGGCATAAAAACCTGATTTTCGACTATGACAATACAAGCTTTTAATCTTCTTT
CAATATAGCATGGAGACACA

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: 4-Hydroxybenzoyl-CoA Thioesterase; L-Pal System-Associated Acyl-CoA Thioesterase; Thioesterase Superfamily; Thioesterase; Thioesterase Family Protein; Acyl-Coa Thioesterase

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MNKTYHHPVQIYYEDTDHSGVVYHPNFLKYFERAREHVIDSNRLDKLWRENGLGFAVYKANMTFQDGVEFAEICDIRTTY
QIDGKYKTLWRQEVWRPGATKAAVIGDIEMVCLDKNKRLQPLPESILKTLLGE

Sequences:

>Translated_133_residues
MNKTYHHPVQIYYEDTDHSGVVYHPNFLKYFERAREHVIDSNRLDKLWRENGLGFAVYKANMTFQDGVEFAEICDIRTTY
QIDGKYKTLWRQEVWRPGATKAAVIGDIEMVCLDKNKRLQPLPESILKTLLGE
>Mature_133_residues
MNKTYHHPVQIYYEDTDHSGVVYHPNFLKYFERAREHVIDSNRLDKLWRENGLGFAVYKANMTFQDGVEFAEICDIRTTY
QIDGKYKTLWRQEVWRPGATKAAVIGDIEMVCLDKNKRLQPLPESILKTLLGE

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15639; Mature: 15639

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTYHHPVQIYYEDTDHSGVVYHPNFLKYFERAREHVIDSNRLDKLWRENGLGFAVYKA
CCCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEE
NMTFQDGVEFAEICDIRTTYQIDGKYKTLWRQEVWRPGATKAAVIGDIEMVCLDKNKRLQ
CCCHHHCCCHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCC
PLPESILKTLLGE
CCCHHHHHHHHCC
>Mature Secondary Structure
MNKTYHHPVQIYYEDTDHSGVVYHPNFLKYFERAREHVIDSNRLDKLWRENGLGFAVYKA
CCCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEE
NMTFQDGVEFAEICDIRTTYQIDGKYKTLWRQEVWRPGATKAAVIGDIEMVCLDKNKRLQ
CCCHHHCCCHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCC
PLPESILKTLLGE
CCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA