Click here to switch to the map view.

The map label for this gene is 119945132

Identifier: 119945132

GI number: 119945132

Start: 1713319

End: 1714851

Strand: Direct

Name: 119945132

Synonym: Ping_1395

Alternate gene names: NA

Gene position: 1713319-1714851 (Clockwise)

Preceding gene: 119945131

Following gene: 119945133

Centisome position: 37.58

GC content: 41.16

Gene sequence:

>1533_bases
ATGGCCAATTACAAACCTGATTTATCCTGCCAAAGTAAATTCATTCCTATTGATTTTGCACAACAAATTATCCCCGGTAC
ATTTGAATATGCACTTTCGCATATTGTCGATAAGCACCTCGATTTAACCACCTTTGATGATTGGTACAATAACGATAATG
GCGGCGCAGCCGCCTATCCACCGTCAGTCATGTTAAAGATTATTCTGTTTGGTTATTCACGGGGTTTAGTTAGCAGTCGC
CGTATCGCACAAGCTTGTGAAACCAATATTACCTTTATGAGTTTGTCGGGTGATGAGCAACCTCATTACACCTCTATCGC
TAGCTTTGTCGCTAAAATGAAAGACAAAATTGAGCCTCTCTTTACACAGGTGCTGATGATATGTGACAGGGAAGGATTGA
TTGGCCGTAATATGTTTGCGATTGATGGCTGCAAGATAAAATCAAATGCCAGTAAAGAGTGGAGTGGAACGTTCGAAGAA
TTGGAACGTAAACAGACCAAGTTACGTCGAGCCAGTCGACGAATTATTGAACGTCATCAAGCACAAGACGGATTGAGTGA
AGATGAAGTGCAGCATGATTTAAAGCAGAAAGAAAAGCTCGATAAAAGCGCTGATAAAATAAAACAATTCTTAGCAAGCA
ATGAAGAAAAAATAGGGAATAGGAAGAAACCCGTCAAAAGTAATGTCACCGATCCCGACAGTGCCAAAATGACCACCAGT
AAAGGAACCATTCAAGGTTACAACGGCATTGCCATTAATGATGATAAACAACAGATTATCATGCAAGCACAAGTATGGGG
CTCGGTGGGTGAGCAGCAAACCTTAAAACCCGCCGTTGAACAACTGCAAACACAGCTCGCTAAACTCGGTACACCGGACG
CATTTAATGAGGCTAAATTTACCGCTGACAGTAGTTTCCACAGTGAAGTTAATCTTGAATTTATGGCAACAACTGGACTC
GATGCTTATATGGCCGACACTGCATTTAGAAGTCGTAATCCCTTATTTAAAACAAGCGAAACCTATCAAACTGAAAAAGA
AAAACGGCGTTTAAAACGCAGTAAAGGTCGAGCCAGATTATTTAATAGTACAGACTTTTATTTTAATGAAAATGAGCTTA
CATGTCGTTGCCCAGCGGGTAAGGAAATGTGGTTAAGTGTTAAAAGCATTGAAACGGCAGGCCGTCATTACGTTCGTTTT
TCAGGTTATTTAAAAGATTGCCGAGTCTGCCCACTTCAAGCACAATGCATGCGGAAAGTACCAAGTAAACAGGGGCGACA
GGTCCAGTTTGAAACGAATAAAGCAGATAAATACATCTCATATACCGATAAAATGCGCGTCAAGATTGACAGTAGTCCTG
GTCGACGGCAGTACAGCAAACGGCTTGGTACAATTGAACCCGTTTTCGGTAATATAACGGTGAATAAAGGGATGAATAAG
TTCACGCTTCGCGGGCAAGAGAAAGTGAATGCGCAATGGCAGATGTATTGCTTAGTTCATAATATAGAGAAGTTAAGAAA
CAGCCTGCATTAA

Upstream 100 bases:

>100_bases
TTTCGTTATTTTCTTATTACTTTAAATTGTATGAAAAATGTACTTGATTGCACTGATCGTCTGTGATCTAATGGTTATTA
TTCGCTCTGAGTGAAATGTA

Downstream 100 bases:

>100_bases
GTCAAGGGCGAAGCCCTAATCTCAAATACCCTACGTTATAAGCCCTCAATAAACCGATTTATCACTCAATTTAACCAATC
TGTTAATAAAAACCGAAGTA

Product: transposase IS4 family protein

Products: NA

Alternate protein names: Transposase; IS4 Family Transposase; ISPsy6 Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; ISCps6 Transposase; Transposase Is4 Family; ISNCY Family Transposase; ISCpe5 Transposase; ISPpu20 Transposase

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MANYKPDLSCQSKFIPIDFAQQIIPGTFEYALSHIVDKHLDLTTFDDWYNNDNGGAAAYPPSVMLKIILFGYSRGLVSSR
RIAQACETNITFMSLSGDEQPHYTSIASFVAKMKDKIEPLFTQVLMICDREGLIGRNMFAIDGCKIKSNASKEWSGTFEE
LERKQTKLRRASRRIIERHQAQDGLSEDEVQHDLKQKEKLDKSADKIKQFLASNEEKIGNRKKPVKSNVTDPDSAKMTTS
KGTIQGYNGIAINDDKQQIIMQAQVWGSVGEQQTLKPAVEQLQTQLAKLGTPDAFNEAKFTADSSFHSEVNLEFMATTGL
DAYMADTAFRSRNPLFKTSETYQTEKEKRRLKRSKGRARLFNSTDFYFNENELTCRCPAGKEMWLSVKSIETAGRHYVRF
SGYLKDCRVCPLQAQCMRKVPSKQGRQVQFETNKADKYISYTDKMRVKIDSSPGRRQYSKRLGTIEPVFGNITVNKGMNK
FTLRGQEKVNAQWQMYCLVHNIEKLRNSLH

Sequences:

>Translated_510_residues
MANYKPDLSCQSKFIPIDFAQQIIPGTFEYALSHIVDKHLDLTTFDDWYNNDNGGAAAYPPSVMLKIILFGYSRGLVSSR
RIAQACETNITFMSLSGDEQPHYTSIASFVAKMKDKIEPLFTQVLMICDREGLIGRNMFAIDGCKIKSNASKEWSGTFEE
LERKQTKLRRASRRIIERHQAQDGLSEDEVQHDLKQKEKLDKSADKIKQFLASNEEKIGNRKKPVKSNVTDPDSAKMTTS
KGTIQGYNGIAINDDKQQIIMQAQVWGSVGEQQTLKPAVEQLQTQLAKLGTPDAFNEAKFTADSSFHSEVNLEFMATTGL
DAYMADTAFRSRNPLFKTSETYQTEKEKRRLKRSKGRARLFNSTDFYFNENELTCRCPAGKEMWLSVKSIETAGRHYVRF
SGYLKDCRVCPLQAQCMRKVPSKQGRQVQFETNKADKYISYTDKMRVKIDSSPGRRQYSKRLGTIEPVFGNITVNKGMNK
FTLRGQEKVNAQWQMYCLVHNIEKLRNSLH
>Mature_509_residues
ANYKPDLSCQSKFIPIDFAQQIIPGTFEYALSHIVDKHLDLTTFDDWYNNDNGGAAAYPPSVMLKIILFGYSRGLVSSRR
IAQACETNITFMSLSGDEQPHYTSIASFVAKMKDKIEPLFTQVLMICDREGLIGRNMFAIDGCKIKSNASKEWSGTFEEL
ERKQTKLRRASRRIIERHQAQDGLSEDEVQHDLKQKEKLDKSADKIKQFLASNEEKIGNRKKPVKSNVTDPDSAKMTTSK
GTIQGYNGIAINDDKQQIIMQAQVWGSVGEQQTLKPAVEQLQTQLAKLGTPDAFNEAKFTADSSFHSEVNLEFMATTGLD
AYMADTAFRSRNPLFKTSETYQTEKEKRRLKRSKGRARLFNSTDFYFNENELTCRCPAGKEMWLSVKSIETAGRHYVRFS
GYLKDCRVCPLQAQCMRKVPSKQGRQVQFETNKADKYISYTDKMRVKIDSSPGRRQYSKRLGTIEPVFGNITVNKGMNKF
TLRGQEKVNAQWQMYCLVHNIEKLRNSLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58187; Mature: 58056

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANYKPDLSCQSKFIPIDFAQQIIPGTFEYALSHIVDKHLDLTTFDDWYNNDNGGAAAYP
CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEECHHHCCCCCCCCCCCC
PSVMLKIILFGYSRGLVSSRRIAQACETNITFMSLSGDEQPHYTSIASFVAKMKDKIEPL
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
FTQVLMICDREGLIGRNMFAIDGCKIKSNASKEWSGTFEELERKQTKLRRASRRIIERHQ
HHHHHHHHCCCCCCCCCEEEEECEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AQDGLSEDEVQHDLKQKEKLDKSADKIKQFLASNEEKIGNRKKPVKSNVTDPDSAKMTTS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEEC
KGTIQGYNGIAINDDKQQIIMQAQVWGSVGEQQTLKPAVEQLQTQLAKLGTPDAFNEAKF
CCCEECCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TADSSFHSEVNLEFMATTGLDAYMADTAFRSRNPLFKTSETYQTEKEKRRLKRSKGRARL
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
FNSTDFYFNENELTCRCPAGKEMWLSVKSIETAGRHYVRFSGYLKDCRVCPLQAQCMRKV
ECCCCCEECCCCEEEECCCCCCCEEEHHHHHHCCCEEEEECCHHHCCCCCCHHHHHHHHC
PSKQGRQVQFETNKADKYISYTDKMRVKIDSSPGRRQYSKRLGTIEPVFGNITVNKGMNK
CCCCCCEEEEECCCCCCEEEECCEEEEEECCCCCHHHHHHHCCCCCCEECCEEECCCCCE
FTLRGQEKVNAQWQMYCLVHNIEKLRNSLH
EEECCCHHCCCCEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANYKPDLSCQSKFIPIDFAQQIIPGTFEYALSHIVDKHLDLTTFDDWYNNDNGGAAAYP
CCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEECHHHCCCCCCCCCCCC
PSVMLKIILFGYSRGLVSSRRIAQACETNITFMSLSGDEQPHYTSIASFVAKMKDKIEPL
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
FTQVLMICDREGLIGRNMFAIDGCKIKSNASKEWSGTFEELERKQTKLRRASRRIIERHQ
HHHHHHHHCCCCCCCCCEEEEECEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AQDGLSEDEVQHDLKQKEKLDKSADKIKQFLASNEEKIGNRKKPVKSNVTDPDSAKMTTS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEEC
KGTIQGYNGIAINDDKQQIIMQAQVWGSVGEQQTLKPAVEQLQTQLAKLGTPDAFNEAKF
CCCEECCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TADSSFHSEVNLEFMATTGLDAYMADTAFRSRNPLFKTSETYQTEKEKRRLKRSKGRARL
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
FNSTDFYFNENELTCRCPAGKEMWLSVKSIETAGRHYVRFSGYLKDCRVCPLQAQCMRKV
ECCCCCEECCCCEEEECCCCCCCEEEHHHHHHCCCEEEEECCHHHCCCCCCHHHHHHHHC
PSKQGRQVQFETNKADKYISYTDKMRVKIDSSPGRRQYSKRLGTIEPVFGNITVNKGMNK
CCCCCCEEEEECCCCCCEEEECCEEEEEECCCCCHHHHHHHCCCCCCEECCEEECCCCCE
FTLRGQEKVNAQWQMYCLVHNIEKLRNSLH
EEECCCHHCCCCEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA