| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119945131
Identifier: 119945131
GI number: 119945131
Start: 1712530
End: 1713096
Strand: Direct
Name: 119945131
Synonym: Ping_1394
Alternate gene names: NA
Gene position: 1712530-1713096 (Clockwise)
Preceding gene: 119945127
Following gene: 119945132
Centisome position: 37.56
GC content: 35.98
Gene sequence:
>567_bases ATGGTTTTTATATCTTCTGGCTTACTACCATTTCTTCTTCATAAATATAAAATGCACCGAGAGCGAGCTGAAAAACTTTT TGATACTCGTAAACAAGAATATCAAGAATACTTCAAAAGAATGGAAGATGCTGCTCGGCTGACGGCTCAAGATTATGATG AGTATTTATCAGTGACCTTGCCTAATGCTAGTCGTAATTTATATGAGTCTGGATCATCTCCTGAGGCGATGGTCGAATAT CAAAAGGTAATGAATGACTTTACAAAAGGTATCAATCAAGGCTTTCAAAAAGCAACAACAGAGTTAACTAGCCTCCGTAT AGTGTGCACTCCGAGTTTAGCCACTTTATTAGATGATTTTGAAAAGCAGTATACAAACTTGATGGGCATGCAACCGCAAA TGCTAAAAGAGATCAAGGAATCTATGACACCAGAGGCGTTCGTTACTGGTGATTTTAATTTTGAAACTCCGACTAAAGTG ATAATGATAGATTTGGGAAATAAGATCAAACAAACAAGAGATAATATTATTGCTTTAATGAGGTCTGAGTTAGGTTACGA AAGTTAA
Upstream 100 bases:
>100_bases TAATACGCTGTTAACTTTCTAGGAGATACTATTGGCAATAGCAGAAGCTTGTAGTTTAGTAGATATATGGATTGAGCCTA AATATATAATTCCAGCATTC
Downstream 100 bases:
>100_bases CAAGGCATTTAAAACGGAACTAAAACAGTTGGTTAGGCTCCGCTTCGCTCCACATTATAACCAACAATTTTAGTCCGCTT AATGCGGCGTTGAGGCTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MVFISSGLLPFLLHKYKMHRERAEKLFDTRKQEYQEYFKRMEDAARLTAQDYDEYLSVTLPNASRNLYESGSSPEAMVEY QKVMNDFTKGINQGFQKATTELTSLRIVCTPSLATLLDDFEKQYTNLMGMQPQMLKEIKESMTPEAFVTGDFNFETPTKV IMIDLGNKIKQTRDNIIALMRSELGYES
Sequences:
>Translated_188_residues MVFISSGLLPFLLHKYKMHRERAEKLFDTRKQEYQEYFKRMEDAARLTAQDYDEYLSVTLPNASRNLYESGSSPEAMVEY QKVMNDFTKGINQGFQKATTELTSLRIVCTPSLATLLDDFEKQYTNLMGMQPQMLKEIKESMTPEAFVTGDFNFETPTKV IMIDLGNKIKQTRDNIIALMRSELGYES >Mature_188_residues MVFISSGLLPFLLHKYKMHRERAEKLFDTRKQEYQEYFKRMEDAARLTAQDYDEYLSVTLPNASRNLYESGSSPEAMVEY QKVMNDFTKGINQGFQKATTELTSLRIVCTPSLATLLDDFEKQYTNLMGMQPQMLKEIKESMTPEAFVTGDFNFETPTKV IMIDLGNKIKQTRDNIIALMRSELGYES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21790; Mature: 21790
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFISSGLLPFLLHKYKMHRERAEKLFDTRKQEYQEYFKRMEDAARLTAQDYDEYLSVTL CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC PNASRNLYESGSSPEAMVEYQKVMNDFTKGINQGFQKATTELTSLRIVCTPSLATLLDDF CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHH EKQYTNLMGMQPQMLKEIKESMTPEAFVTGDFNFETPTKVIMIDLGNKIKQTRDNIIALM HHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHH RSELGYES HHHCCCCC >Mature Secondary Structure MVFISSGLLPFLLHKYKMHRERAEKLFDTRKQEYQEYFKRMEDAARLTAQDYDEYLSVTL CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC PNASRNLYESGSSPEAMVEYQKVMNDFTKGINQGFQKATTELTSLRIVCTPSLATLLDDF CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHH EKQYTNLMGMQPQMLKEIKESMTPEAFVTGDFNFETPTKVIMIDLGNKIKQTRDNIIALM HHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHH RSELGYES HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA