| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945133
Identifier: 119945133
GI number: 119945133
Start: 1715200
End: 1715520
Strand: Direct
Name: 119945133
Synonym: Ping_1396
Alternate gene names: NA
Gene position: 1715200-1715520 (Clockwise)
Preceding gene: 119945132
Following gene: 119945134
Centisome position: 37.62
GC content: 42.99
Gene sequence:
>321_bases ATGACAGATATTAAAGTAAATAAAGAGCAGTGGGATGCTGTGTCCGCAGATGAACAACAAAGAATTACTGAGGGATTAAT TGGTACTGGAGTTATGCAGGAAGGCGACCGAATTATAGGATCGGACTCTGAACCTAAATTTGATAAAAATACTTTAATGG AAAAAGGCTGGAACCCACTTAAGGATATATGCAAAGCTGGATGTGATGTTGCTGCTGGCGCTGCTTTAGGTTGGTGCACC GCTAACACTGTGGGAGTCGGTTTAGTTGCTTGCATAGCTGCCGCTGAAGTCGCACGAAGAGAATGTAAGAAACATTGCTG A
Upstream 100 bases:
>100_bases TTTTATTACCCATTTATTATTTATGGGCAATAAAATGCAATGGTATCCAAGTATGTTGCTGTTGCATCCCTAAATGCAGT GTTTTATAAGGAACTAAATC
Downstream 100 bases:
>100_bases TTTTCAGTATATAACAAGGCCATTAAATCGGACAAAAAACAGCTGGCTATTGTTCGTGTCTCACAATTTTAGCCTGCTAT TTTCTGCCGTTTATAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTDIKVNKEQWDAVSADEQQRITEGLIGTGVMQEGDRIIGSDSEPKFDKNTLMEKGWNPLKDICKAGCDVAAGAALGWCT ANTVGVGLVACIAAAEVARRECKKHC
Sequences:
>Translated_106_residues MTDIKVNKEQWDAVSADEQQRITEGLIGTGVMQEGDRIIGSDSEPKFDKNTLMEKGWNPLKDICKAGCDVAAGAALGWCT ANTVGVGLVACIAAAEVARRECKKHC >Mature_105_residues TDIKVNKEQWDAVSADEQQRITEGLIGTGVMQEGDRIIGSDSEPKFDKNTLMEKGWNPLKDICKAGCDVAAGAALGWCTA NTVGVGLVACIAAAEVARRECKKHC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11339; Mature: 11208
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIKVNKEQWDAVSADEQQRITEGLIGTGVMQEGDRIIGSDSEPKFDKNTLMEKGWNPL CCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCHHCCCEECCCCCCCCCCHHHHHHCCCCHH KDICKAGCDVAAGAALGWCTANTVGVGLVACIAAAEVARRECKKHC HHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDIKVNKEQWDAVSADEQQRITEGLIGTGVMQEGDRIIGSDSEPKFDKNTLMEKGWNPL CCCCCCHHHHCCCCCHHHHHHHHHHHHCCCHHCCCEECCCCCCCCCCHHHHHHCCCCHH KDICKAGCDVAAGAALGWCTANTVGVGLVACIAAAEVARRECKKHC HHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA