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The map label for this gene is gvpA [H]

Identifier: 119945001

GI number: 119945001

Start: 1564127

End: 1564345

Strand: Direct

Name: gvpA [H]

Synonym: Ping_1253

Alternate gene names: 119945001

Gene position: 1564127-1564345 (Clockwise)

Preceding gene: 119945000

Following gene: 119945002

Centisome position: 34.3

GC content: 42.01

Gene sequence:

>219_bases
ATGGCTAACGTACAAAAAACTACTGATTCTTCAGGCCTAGCAGAAGTTATCGATCGCATCCTTGACAAAGGCATCGTAAT
CGACGCATTCGTTAAAGTATCACTAGTAGGTATCGAGTTACTATCAATCGAAGCACGTGTTGTTATCGCTTCAGTTGAAA
CTTACTTGAAATATGCTGAAGCTATTGGTCTTACAGCGAGCGCTGCAACACCTGCATAG

Upstream 100 bases:

>100_bases
ACTCTTTAAACAGTCGAAGTGATTTAATAATAAGTTTACAGAGCAGATCACAAAATAATTGTGACTGATTATCTAAAATA
ATTCTTTAAGGAATATGAAT

Downstream 100 bases:

>100_bases
CGCTTCTGCACCAGCATGATGGCAACATCATGAATAGCCTTTTTAGAGATTAACATTTTTTTGAAAAGGCTATTAAGCTT
TATTGGGGCTGAATAATTTA

Product: gas vesicle synthesis protein GvpA

Products: NA

Alternate protein names: GVP [H]

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MANVQKTTDSSGLAEVIDRILDKGIVIDAFVKVSLVGIELLSIEARVVIASVETYLKYAEAIGLTASAATPA

Sequences:

>Translated_72_residues
MANVQKTTDSSGLAEVIDRILDKGIVIDAFVKVSLVGIELLSIEARVVIASVETYLKYAEAIGLTASAATPA
>Mature_71_residues
ANVQKTTDSSGLAEVIDRILDKGIVIDAFVKVSLVGIELLSIEARVVIASVETYLKYAEAIGLTASAATPA

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the st

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000638
- InterPro:   IPR018493 [H]

Pfam domain/function: PF00741 Gas_vesicle [H]

EC number: NA

Molecular weight: Translated: 7521; Mature: 7390

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00234 GAS_VESICLE_A_1 ; PS00669 GAS_VESICLE_A_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVQKTTDSSGLAEVIDRILDKGIVIDAFVKVSLVGIELLSIEARVVIASVETYLKYAE
CCCCCCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHH
AIGLTASAATPA
HHCCCCCCCCCC
>Mature Secondary Structure 
ANVQKTTDSSGLAEVIDRILDKGIVIDAFVKVSLVGIELLSIEARVVIASVETYLKYAE
CCCCCCCCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHH
AIGLTASAATPA
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA