| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119945002
Identifier: 119945002
GI number: 119945002
Start: 1564522
End: 1565781
Strand: Direct
Name: 119945002
Synonym: Ping_1254
Alternate gene names: NA
Gene position: 1564522-1565781 (Clockwise)
Preceding gene: 119945001
Following gene: 119945003
Centisome position: 34.31
GC content: 42.38
Gene sequence:
>1260_bases ATGAACTTCCTAGAGAACATGGATCTACTCCAAAACGAACATATTGGTAGATCAGAATCTAAGATTACCGAGCTACTTAC TGACTTACATCAAATACGCATAGCAACGGGTGAAAAAAGCGCAGCCGCACGAGCTGAGCTTGTAAATACTAACGCTAAAG CGACAGAAGAAATGCTCAAAAACTTCAATCAAACACGAATGAATGCCACTCAAAAACGAATCGAAATAGCCACTCAGGAT ACACAGCAACGGTTAACTTTTGCTAGCAATCTGAAGCGAAAAGTCGCGGACCTGCTGGATCATTTTCATACATCCCGGCA GCATATGGCGGAATCATCGACTGCCGCACGAGCTGAGCTTGTCAACGCTAACGCTAAAGCGACAGAAGAGATGATCAAAG GCTTCAATCAAATCCGAATTAATATCAATAAGACTCGAATTGAGATGGCAGAAACATCAGCTGCCGAACGAGCAGAATTT TTTGCAAAAAATGCCAATGTGACAGAAGAAATGCTGAAAGGCTTCAATCAAATGCGATTTAATGCCAATCAGGCTCGAAT TGAAATGGTAAGTCAGGATACACAGCAGCGATTGACTTTTGTTCGCAATATGAAGCGAAAAGTCGAGGATTTAGCAGATA AATCTCAGGCACTCCACACCCAGATAGCGGAAACGTCGGCTGTCGAACCAGCAGAGATTGTCAGCTCTGATACCAAAACG ACAGAAGAGGTAACCAGTCAAGATACTCCTCAGCGGTCGACTTTAGCTAGTAATGAAGAAAAAGTTGTTACGCCAAAGAT TAGAGCGGGGCTGTTGAAGGCCGAGGCGTTAATAATAGCTTCAGAAACCACAATCGATCAGCAAGTAAAAAAATCGGTGG CTAAGAAGAAACAGCCAGCAGCTAAAGCAAGAACGACAGAAACTAAAATGACAGTAGCAGCTAAAGCTAGAACGACAGAA ACTAAAATGACAGTAGCAGCTAAAGATAAAACGCCAGAAACTAAAACGACAGTAGCAGCTAAAGATAAAACCCCAGTAGC AGCTAAAGCTAAAACAACTAGAGCAGCTAGAGCTAAAGTAGCAGCAGCTAGTAGAGCTAAAGTAGCAGCCGCTAAAAATA CTGAAGCTAAAGCTAAAACAGCAGCCACTAAAACAACAGAAGCTAAAACTGAAGCTAAAGTAGCAGCCACTAAAACGACA GAAGCTAAAACTGAAGCTAAAGTAGCAGCCACTAAAACTGAAGCTAAAGAGCAAGACTAG
Upstream 100 bases:
>100_bases GCTTTATTGGGGCTGAATAATTTATTTCAGCCCTTTAATAATAATTGCGGCTATAATTGAAAATTGAAATTGACAAGCCG TGAAAACCGGGAGATGGACG
Downstream 100 bases:
>100_bases AAAACCTAGTGCCACCGAAGACCAGAAATGTTTGAATAATAAATAGTGTTCATCTAAGCCGGTAACGGAAGCTAACATTC AAACAATAATAATACTAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MNFLENMDLLQNEHIGRSESKITELLTDLHQIRIATGEKSAAARAELVNTNAKATEEMLKNFNQTRMNATQKRIEIATQD TQQRLTFASNLKRKVADLLDHFHTSRQHMAESSTAARAELVNANAKATEEMIKGFNQIRININKTRIEMAETSAAERAEF FAKNANVTEEMLKGFNQMRFNANQARIEMVSQDTQQRLTFVRNMKRKVEDLADKSQALHTQIAETSAVEPAEIVSSDTKT TEEVTSQDTPQRSTLASNEEKVVTPKIRAGLLKAEALIIASETTIDQQVKKSVAKKKQPAAKARTTETKMTVAAKARTTE TKMTVAAKDKTPETKTTVAAKDKTPVAAKAKTTRAARAKVAAASRAKVAAAKNTEAKAKTAATKTTEAKTEAKVAATKTT EAKTEAKVAATKTEAKEQD
Sequences:
>Translated_419_residues MNFLENMDLLQNEHIGRSESKITELLTDLHQIRIATGEKSAAARAELVNTNAKATEEMLKNFNQTRMNATQKRIEIATQD TQQRLTFASNLKRKVADLLDHFHTSRQHMAESSTAARAELVNANAKATEEMIKGFNQIRININKTRIEMAETSAAERAEF FAKNANVTEEMLKGFNQMRFNANQARIEMVSQDTQQRLTFVRNMKRKVEDLADKSQALHTQIAETSAVEPAEIVSSDTKT TEEVTSQDTPQRSTLASNEEKVVTPKIRAGLLKAEALIIASETTIDQQVKKSVAKKKQPAAKARTTETKMTVAAKARTTE TKMTVAAKDKTPETKTTVAAKDKTPVAAKAKTTRAARAKVAAASRAKVAAAKNTEAKAKTAATKTTEAKTEAKVAATKTT EAKTEAKVAATKTEAKEQD >Mature_419_residues MNFLENMDLLQNEHIGRSESKITELLTDLHQIRIATGEKSAAARAELVNTNAKATEEMLKNFNQTRMNATQKRIEIATQD TQQRLTFASNLKRKVADLLDHFHTSRQHMAESSTAARAELVNANAKATEEMIKGFNQIRININKTRIEMAETSAAERAEF FAKNANVTEEMLKGFNQMRFNANQARIEMVSQDTQQRLTFVRNMKRKVEDLADKSQALHTQIAETSAVEPAEIVSSDTKT TEEVTSQDTPQRSTLASNEEKVVTPKIRAGLLKAEALIIASETTIDQQVKKSVAKKKQPAAKARTTETKMTVAAKARTTE TKMTVAAKDKTPETKTTVAAKDKTPVAAKAKTTRAARAKVAAASRAKVAAAKNTEAKAKTAATKTTEAKTEAKVAATKTT EAKTEAKVAATKTEAKEQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45992; Mature: 45992
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFLENMDLLQNEHIGRSESKITELLTDLHQIRIATGEKSAAARAELVNTNAKATEEMLK CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH NFNQTRMNATQKRIEIATQDTQQRLTFASNLKRKVADLLDHFHTSRQHMAESSTAARAEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNANAKATEEMIKGFNQIRININKTRIEMAETSAAERAEFFAKNANVTEEMLKGFNQMRF HCCCHHHHHHHHCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC NANQARIEMVSQDTQQRLTFVRNMKRKVEDLADKSQALHTQIAETSAVEPAEIVSSDTKT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCH TEEVTSQDTPQRSTLASNEEKVVTPKIRAGLLKAEALIIASETTIDQQVKKSVAKKKQPA HHHHHCCCCCCHHHHCCCCCCEECHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCH AKARTTETKMTVAAKARTTETKMTVAAKDKTPETKTTVAAKDKTPVAAKAKTTRAARAKV HHHHCCHHHEEEEECCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHH AAASRAKVAAAKNTEAKAKTAATKTTEAKTEAKVAATKTTEAKTEAKVAATKTEAKEQD HHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNFLENMDLLQNEHIGRSESKITELLTDLHQIRIATGEKSAAARAELVNTNAKATEEMLK CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHH NFNQTRMNATQKRIEIATQDTQQRLTFASNLKRKVADLLDHFHTSRQHMAESSTAARAEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNANAKATEEMIKGFNQIRININKTRIEMAETSAAERAEFFAKNANVTEEMLKGFNQMRF HCCCHHHHHHHHCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC NANQARIEMVSQDTQQRLTFVRNMKRKVEDLADKSQALHTQIAETSAVEPAEIVSSDTKT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCH TEEVTSQDTPQRSTLASNEEKVVTPKIRAGLLKAEALIIASETTIDQQVKKSVAKKKQPA HHHHHCCCCCCHHHHCCCCCCEECHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCH AKARTTETKMTVAAKARTTETKMTVAAKDKTPETKTTVAAKDKTPVAAKAKTTRAARAKV HHHHCCHHHEEEEECCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHH AAASRAKVAAAKNTEAKAKTAATKTTEAKTEAKVAATKTTEAKTEAKVAATKTEAKEQD HHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA