| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is zraR [C]
Identifier: 119945000
GI number: 119945000
Start: 1562092
End: 1562484
Strand: Direct
Name: zraR [C]
Synonym: Ping_1251
Alternate gene names: 119945000
Gene position: 1562092-1562484 (Clockwise)
Preceding gene: 119944999
Following gene: 119945001
Centisome position: 34.26
GC content: 39.95
Gene sequence:
>393_bases ATGAAATCGCCATCACAGCTTACCATCGACTGTCTCATCGTAGATGATGAACCCGGTATAGCTTGGGTCATGGAACATAT ATTGCGGGGTCAGGGTTACACAGTGGTCAGTGTCCAAACTGGCGATGAGGCTTTGAAAGCAGTGAAAGAAGAGGATTTCC GATTGATTTTCATGGATGCTAAACTACCTGATATCGAAGGTTTAGTGCTTGCTCGTAAATTGCAATTTATGAAACTAGAA ATACCGATCATTATGGTCTCCGGTTATTATTATCCAGACGATCCTGCCATTATTCAGGCGATTGAAAGCAATATTATTTT AAAGTTTATTGCCAAGCCATTCACTAATAGTCATATTATTGCCGCCTTAGAAGGTTTGTCAAATTCCAAGTAA
Upstream 100 bases:
>100_bases TTTCTCTCTGTTATTCGATTGTCAAACAACATCGGGGTAGTATTAGCGTGGATAGCATGCTCGGTAAGGGAAGCACTTTC ACAGTATTGTTACCAGCATT
Downstream 100 bases:
>100_bases AATAATATGACAGTATCCCCATCAATATATTCGTAAGCAACCAATTAAAAAATCTCAATAAGTTGCTAAATTTTTTATGC TTTCCTTTTTAAGGAGAAGA
Product: CheY-like chemotaxis protein, response regulator receiver
Products: NA
Alternate protein names: CheY-Like Chemotaxis Protein Response Regulator Receiver; Response Regulator Receiver Protein; Multi-Sensor Signal Transduction Histidine Kinase
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MKSPSQLTIDCLIVDDEPGIAWVMEHILRGQGYTVVSVQTGDEALKAVKEEDFRLIFMDAKLPDIEGLVLARKLQFMKLE IPIIMVSGYYYPDDPAIIQAIESNIILKFIAKPFTNSHIIAALEGLSNSK
Sequences:
>Translated_130_residues MKSPSQLTIDCLIVDDEPGIAWVMEHILRGQGYTVVSVQTGDEALKAVKEEDFRLIFMDAKLPDIEGLVLARKLQFMKLE IPIIMVSGYYYPDDPAIIQAIESNIILKFIAKPFTNSHIIAALEGLSNSK >Mature_130_residues MKSPSQLTIDCLIVDDEPGIAWVMEHILRGQGYTVVSVQTGDEALKAVKEEDFRLIFMDAKLPDIEGLVLARKLQFMKLE IPIIMVSGYYYPDDPAIIQAIESNIILKFIAKPFTNSHIIAALEGLSNSK
Specific function: Member Of The Two-Component Regulatory System Zras/Zrar. When Activated By Zras It Acts In Conjunction With Sigma-54 To Regulate The Expression Of Zrap. Positively Autoregulates The Expression Of The Zrasr Operon. [C]
COG id: COG2204
COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790437, Length=117, Percent_Identity=26.4957264957265, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14508; Mature: 14508
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSPSQLTIDCLIVDDEPGIAWVMEHILRGQGYTVVSVQTGDEALKAVKEEDFRLIFMDA CCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCEEEEEEEC KLPDIEGLVLARKLQFMKLEIPIIMVSGYYYPDDPAIIQAIESNIILKFIAKPFTNSHII CCCCCCHHHHHHHEEEEEEEEEEEEEECEEECCCHHHHHHHHCCEEEEEEECCCCCCEEE AALEGLSNSK EEEECCCCCC >Mature Secondary Structure MKSPSQLTIDCLIVDDEPGIAWVMEHILRGQGYTVVSVQTGDEALKAVKEEDFRLIFMDA CCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCEEEEEEEC KLPDIEGLVLARKLQFMKLEIPIIMVSGYYYPDDPAIIQAIESNIILKFIAKPFTNSHII CCCCCCHHHHHHHEEEEEEEEEEEEEECEEECCCHHHHHHHHCCEEEEEEECCCCCCEEE AALEGLSNSK EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA