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The map label for this gene is qseC [H]

Identifier: 119944978

GI number: 119944978

Start: 1530017

End: 1531450

Strand: Direct

Name: qseC [H]

Synonym: Ping_1229

Alternate gene names: 119944978

Gene position: 1530017-1531450 (Clockwise)

Preceding gene: 119944977

Following gene: 119944979

Centisome position: 33.56

GC content: 38.7

Gene sequence:

>1434_bases
TTGAAAAATAATATAACCACAGTAATCTCTATTCAAAAACGATTAATAGTATCAACGGTCAGCGTTGCAACCCTGTTAAT
TTTTACTTCATGGATTTTTGTCTTTCATGAAACTAAAAATGAAGTCGATGAGGTTTATGATGCGCGCTTGGGACAACTGG
CTAAAATTCTGGCGCTTAGTATGCCGAGTGTGATGGATTTGGCGCCTTCTGTTCGAGATGAAATCTATGCTGATTGGTCG
AGCGTCATTAGTGATGTTGATAAAGATAAAATTGATTCATTTCCGAGCGTGGGTCATCCGGATGACCAAAATTTATTTTT
TCAATTTTATACCAATGGTAATCTGGTATTTAAATCACCCGGTGCGCCCGAACCCCTCAATACGGGAGACCTGTATTCTG
GTACCGTTAACCTAAATAATGAACAGTGGCACTATTTTCAATTAAAAATTCCTTCTCGGGTCAATCCTAACGCCTATGTG
GTGGTTGCTGAAAAACAGTCAATCAGAGATGAGGTTGTTGATGAAATTGCCTTATCAACCAGTTTACCGCAACTTTTATT
AATTCCTACTCTGGCACTTATATTGTTCTTTTTAATTAAAAAGTTTTTACGGCCCGTTAATGAATTACGCTTAGCCGTAT
CGCAGTGTGATGTTAATAAATTAGAATCGATAAAAATAGATCACCCGGCAGTTGAACTCGAACCACTGGTACAGCAACTT
AACTACCTGTTAAGTGAATTAGATAATGCCCGGGAGAGAGAACGCCGCTTTACCCGCACTGCGGCACATGAATTAAAAAC
ACCGCTGGCGGTGTTAAGATTAAATATTGAAAATGCATTGGCAAGTGAGGATCAAGCATCACAGGCTTATGCGCTTAACA
ACATAGTGCGAGGCGTTGATAGAACCGACCGGTTAATTCAACAATTGTTGATGCACTCTCGCATTGAAGCTAAACAACGA
AATATTTTCAAAAATATAAATATCGCCGCACTAATTCGGGAGGTTATTGCTTTATTGGCGCCTTTGGCGTTAAAGAATAA
TCAAGAAATCTCTTTTTCTGGTCCTGATGAATGTATTATTCAGGGAGAGGGGATGTTTATCTCTATTTTATTTAGTAATT
TAATCGATAATGCAATTCGTTATTCCGGTGAAAATAGTGAGATAAAAATAAGCCTAACCATTAATCAGTCTGAATCCCAT
CACAATATAGTCGAAGTACTTGTTCAGGATAATGGTCCACCAATACCGACGGCTGTAAGAGATAAAATATTTGAAAAATT
CTTTCGGGCGCACAGTGAAAAAGGCGATGGTGCAGGACTTGGAATGGCTATCGCGGCCGAGGCTGCTAAGTTACACGGGG
CTTCAATAAGTTTGTTACCCTATGATAAAACGTTACTTAATACTTTTCTTTTCACCATGGATTGTGGCAAATAA

Upstream 100 bases:

>100_bases
GAGATGGCGAGCGATAACGCGATTGAAGTCTATATACATAATTTACGTAAGAAGATTAACAACCAATTAATTAAAAATAT
CAGAGGGGTTGGGTACATCA

Downstream 100 bases:

>100_bases
AAATTATTTTTTATTGAAGTTTACAAAAGCAGAACAGATCTTTTACGGTCTTTTATTTGAATCACTACTACTGTCACTTT
AATTTTTTTTATGGAGATCG

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MKNNITTVISIQKRLIVSTVSVATLLIFTSWIFVFHETKNEVDEVYDARLGQLAKILALSMPSVMDLAPSVRDEIYADWS
SVISDVDKDKIDSFPSVGHPDDQNLFFQFYTNGNLVFKSPGAPEPLNTGDLYSGTVNLNNEQWHYFQLKIPSRVNPNAYV
VVAEKQSIRDEVVDEIALSTSLPQLLLIPTLALILFFLIKKFLRPVNELRLAVSQCDVNKLESIKIDHPAVELEPLVQQL
NYLLSELDNARERERRFTRTAAHELKTPLAVLRLNIENALASEDQASQAYALNNIVRGVDRTDRLIQQLLMHSRIEAKQR
NIFKNINIAALIREVIALLAPLALKNNQEISFSGPDECIIQGEGMFISILFSNLIDNAIRYSGENSEIKISLTINQSESH
HNIVEVLVQDNGPPIPTAVRDKIFEKFFRAHSEKGDGAGLGMAIAAEAAKLHGASISLLPYDKTLLNTFLFTMDCGK

Sequences:

>Translated_477_residues
MKNNITTVISIQKRLIVSTVSVATLLIFTSWIFVFHETKNEVDEVYDARLGQLAKILALSMPSVMDLAPSVRDEIYADWS
SVISDVDKDKIDSFPSVGHPDDQNLFFQFYTNGNLVFKSPGAPEPLNTGDLYSGTVNLNNEQWHYFQLKIPSRVNPNAYV
VVAEKQSIRDEVVDEIALSTSLPQLLLIPTLALILFFLIKKFLRPVNELRLAVSQCDVNKLESIKIDHPAVELEPLVQQL
NYLLSELDNARERERRFTRTAAHELKTPLAVLRLNIENALASEDQASQAYALNNIVRGVDRTDRLIQQLLMHSRIEAKQR
NIFKNINIAALIREVIALLAPLALKNNQEISFSGPDECIIQGEGMFISILFSNLIDNAIRYSGENSEIKISLTINQSESH
HNIVEVLVQDNGPPIPTAVRDKIFEKFFRAHSEKGDGAGLGMAIAAEAAKLHGASISLLPYDKTLLNTFLFTMDCGK
>Mature_477_residues
MKNNITTVISIQKRLIVSTVSVATLLIFTSWIFVFHETKNEVDEVYDARLGQLAKILALSMPSVMDLAPSVRDEIYADWS
SVISDVDKDKIDSFPSVGHPDDQNLFFQFYTNGNLVFKSPGAPEPLNTGDLYSGTVNLNNEQWHYFQLKIPSRVNPNAYV
VVAEKQSIRDEVVDEIALSTSLPQLLLIPTLALILFFLIKKFLRPVNELRLAVSQCDVNKLESIKIDHPAVELEPLVQQL
NYLLSELDNARERERRFTRTAAHELKTPLAVLRLNIENALASEDQASQAYALNNIVRGVDRTDRLIQQLLMHSRIEAKQR
NIFKNINIAALIREVIALLAPLALKNNQEISFSGPDECIIQGEGMFISILFSNLIDNAIRYSGENSEIKISLTINQSESH
HNIVEVLVQDNGPPIPTAVRDKIFEKFFRAHSEKGDGAGLGMAIAAEAAKLHGASISLLPYDKTLLNTFLFTMDCGK

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=462, Percent_Identity=27.2727272727273, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI1786783, Length=384, Percent_Identity=21.6145833333333, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1790551, Length=319, Percent_Identity=27.2727272727273, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1788279, Length=356, Percent_Identity=26.4044943820225, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI87082128, Length=308, Percent_Identity=26.2987012987013, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1790861, Length=235, Percent_Identity=28.936170212766, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1786912, Length=231, Percent_Identity=29.4372294372294, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786600, Length=222, Percent_Identity=27.9279279279279, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788393, Length=234, Percent_Identity=26.0683760683761, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1790346, Length=259, Percent_Identity=24.7104247104247, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787374, Length=278, Percent_Identity=26.978417266187, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1787894, Length=347, Percent_Identity=23.6311239193084, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789149, Length=248, Percent_Identity=27.0161290322581, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 53394; Mature: 53394

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNITTVISIQKRLIVSTVSVATLLIFTSWIFVFHETKNEVDEVYDARLGQLAKILALS
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MPSVMDLAPSVRDEIYADWSSVISDVDKDKIDSFPSVGHPDDQNLFFQFYTNGNLVFKSP
CCHHHHHCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEEECCEEEECCC
GAPEPLNTGDLYSGTVNLNNEQWHYFQLKIPSRVNPNAYVVVAEKQSIRDEVVDEIALST
CCCCCCCCCCCEECEEECCCCCEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHC
SLPQLLLIPTLALILFFLIKKFLRPVNELRLAVSQCDVNKLESIKIDHPAVELEPLVQQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEECCCCCHHHHHHHHHH
NYLLSELDNARERERRFTRTAAHELKTPLAVLRLNIENALASEDQASQAYALNNIVRGVD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHCCCCHHHHHHHHHHHHHCCC
RTDRLIQQLLMHSRIEAKQRNIFKNINIAALIREVIALLAPLALKNNQEISFSGPDECII
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEE
QGEGMFISILFSNLIDNAIRYSGENSEIKISLTINQSESHHNIVEVLVQDNGPPIPTAVR
ECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHH
DKIFEKFFRAHSEKGDGAGLGMAIAAEAAKLHGASISLLPYDKTLLNTFLFTMDCGK
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKNNITTVISIQKRLIVSTVSVATLLIFTSWIFVFHETKNEVDEVYDARLGQLAKILALS
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MPSVMDLAPSVRDEIYADWSSVISDVDKDKIDSFPSVGHPDDQNLFFQFYTNGNLVFKSP
CCHHHHHCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEEECCEEEECCC
GAPEPLNTGDLYSGTVNLNNEQWHYFQLKIPSRVNPNAYVVVAEKQSIRDEVVDEIALST
CCCCCCCCCCCEECEEECCCCCEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHC
SLPQLLLIPTLALILFFLIKKFLRPVNELRLAVSQCDVNKLESIKIDHPAVELEPLVQQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEECCCCCHHHHHHHHHH
NYLLSELDNARERERRFTRTAAHELKTPLAVLRLNIENALASEDQASQAYALNNIVRGVD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEHHHHHCCCCHHHHHHHHHHHHHCCC
RTDRLIQQLLMHSRIEAKQRNIFKNINIAALIREVIALLAPLALKNNQEISFSGPDECII
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEE
QGEGMFISILFSNLIDNAIRYSGENSEIKISLTINQSESHHNIVEVLVQDNGPPIPTAVR
ECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHH
DKIFEKFFRAHSEKGDGAGLGMAIAAEAAKLHGASISLLPYDKTLLNTFLFTMDCGK
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]