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The map label for this gene is dppC [H]

Identifier: 119944337

GI number: 119944337

Start: 731992

End: 732936

Strand: Direct

Name: dppC [H]

Synonym: Ping_0564

Alternate gene names: 119944337

Gene position: 731992-732936 (Clockwise)

Preceding gene: 119944336

Following gene: 119944343

Centisome position: 16.05

GC content: 42.33

Gene sequence:

>945_bases
ATGAATACTATTACTTCTTCTCATGTCCCGACCCGTTGGGAACGTTTGAAAAACTCAGATCTGATTTATTATTTTCTGAA
AGACAAAGTCGCAATGTTCAGTTTTGCCATCTTTCTGACTTGTTTGCTGATGTCTTTATTTGCGCCACTTATTGCACCGA
CTGATCCCTATGATCTTACCAGCATTAGTCTGATGGATTCGGAACTTCCCCCTGCTTGGATGGCAGAGGGAGATGAGAAT
TTTTTACTGGGAACTGACGATCAAGGGCGCGATATATTCTCAACCATACTTTATGGCTCTCGTTTATCCTTAACCATTGG
CTTTTTAGCCGTCGGCTTGCAGCTTATATTAGGTATAGTCATTGGTCTTTCTTCTGGTTATTTTGGCGGACGTATTGACA
GTTTTCTGATGCGTTTTGCCGATGTACAGTTGTCCTTCTCAACCCTGATGGTGGCTATTATTGTCTCGGCTATTTTTAAA
GCGAGTTTTGGTAATGAATTCTACAGTGAATATGCGGTGATCATGCTGGTTGTGATCATCGGTATTGCCGAATGGCCGCA
ATATGCGCGCACCATTCGTGCTTCGGTACTGGCGGAAAAGGAAAAAGAATACGTAGAAGCTGCGCAGGTGATGGGATTTA
AAGCCGGTCGAATAATGTTCAGACATATTTTACCAAATTGTCTATCACCGATTCTGGTTATTTCTACGGTACAAGTTGCT
AATGCAATCATGTCTGAAGCTGCATTATCATTTTTGGGCTTAGGTTTACCCGTTGACCAGCCTTCATTAGGTGCGCTGAT
TAGTATAGGTTTTAAATATATTTTCTCGGGTGCCTGGTGGATAACACTCTTCCCTGGGATTGTGCTGGTAACTCTGGTAC
TGGTTATTAACCTGCTGGGTGACTGGTTAAGAGATGCCTTTAACCCGAAAATCTACAAAGGTTAA

Upstream 100 bases:

>100_bases
TTTTTGTCGGTTTAATCTTTGTGGTGACAAATACCGTTGTTGATCTTTTATATGGTGTGGTTGATCCTACTGTTAATATA
ACCGGTAAAGGTGCTTAAAC

Downstream 100 bases:

>100_bases
GCCTTTAATGCTTTCAGCCGTCAGCCGTCAGCCGTCAGCCGTCAGCCGTTAGCTTTCCAGCTTTCCGATTTTTAGATACA
AAAAAGGCGCTGGATAGCGC

Product: peptide ABC transporter, protein inner membrane binding component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MNTITSSHVPTRWERLKNSDLIYYFLKDKVAMFSFAIFLTCLLMSLFAPLIAPTDPYDLTSISLMDSELPPAWMAEGDEN
FLLGTDDQGRDIFSTILYGSRLSLTIGFLAVGLQLILGIVIGLSSGYFGGRIDSFLMRFADVQLSFSTLMVAIIVSAIFK
ASFGNEFYSEYAVIMLVVIIGIAEWPQYARTIRASVLAEKEKEYVEAAQVMGFKAGRIMFRHILPNCLSPILVISTVQVA
NAIMSEAALSFLGLGLPVDQPSLGALISIGFKYIFSGAWWITLFPGIVLVTLVLVINLLGDWLRDAFNPKIYKG

Sequences:

>Translated_314_residues
MNTITSSHVPTRWERLKNSDLIYYFLKDKVAMFSFAIFLTCLLMSLFAPLIAPTDPYDLTSISLMDSELPPAWMAEGDEN
FLLGTDDQGRDIFSTILYGSRLSLTIGFLAVGLQLILGIVIGLSSGYFGGRIDSFLMRFADVQLSFSTLMVAIIVSAIFK
ASFGNEFYSEYAVIMLVVIIGIAEWPQYARTIRASVLAEKEKEYVEAAQVMGFKAGRIMFRHILPNCLSPILVISTVQVA
NAIMSEAALSFLGLGLPVDQPSLGALISIGFKYIFSGAWWITLFPGIVLVTLVLVINLLGDWLRDAFNPKIYKG
>Mature_314_residues
MNTITSSHVPTRWERLKNSDLIYYFLKDKVAMFSFAIFLTCLLMSLFAPLIAPTDPYDLTSISLMDSELPPAWMAEGDEN
FLLGTDDQGRDIFSTILYGSRLSLTIGFLAVGLQLILGIVIGLSSGYFGGRIDSFLMRFADVQLSFSTLMVAIIVSAIFK
ASFGNEFYSEYAVIMLVVIIGIAEWPQYARTIRASVLAEKEKEYVEAAQVMGFKAGRIMFRHILPNCLSPILVISTVQVA
NAIMSEAALSFLGLGLPVDQPSLGALISIGFKYIFSGAWWITLFPGIVLVTLVLVINLLGDWLRDAFNPKIYKG

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=312, Percent_Identity=39.1025641025641, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1787760, Length=308, Percent_Identity=31.8181818181818, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI1787054, Length=311, Percent_Identity=31.5112540192926, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1787498, Length=292, Percent_Identity=32.5342465753425, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1789889, Length=257, Percent_Identity=31.5175097276265, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1788505, Length=228, Percent_Identity=30.7017543859649, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1787549, Length=251, Percent_Identity=31.8725099601594, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34707; Mature: 34707

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTITSSHVPTRWERLKNSDLIYYFLKDKVAMFSFAIFLTCLLMSLFAPLIAPTDPYDLT
CCCCCCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SISLMDSELPPAWMAEGDENFLLGTDDQGRDIFSTILYGSRLSLTIGFLAVGLQLILGIV
EEEHHCCCCCCHHHCCCCCCEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IGLSSGYFGGRIDSFLMRFADVQLSFSTLMVAIIVSAIFKASFGNEFYSEYAVIMLVVII
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GIAEWPQYARTIRASVLAEKEKEYVEAAQVMGFKAGRIMFRHILPNCLSPILVISTVQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAIMSEAALSFLGLGLPVDQPSLGALISIGFKYIFSGAWWITLFPGIVLVTLVLVINLLG
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
DWLRDAFNPKIYKG
HHHHHHCCCCCCCC
>Mature Secondary Structure
MNTITSSHVPTRWERLKNSDLIYYFLKDKVAMFSFAIFLTCLLMSLFAPLIAPTDPYDLT
CCCCCCCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SISLMDSELPPAWMAEGDENFLLGTDDQGRDIFSTILYGSRLSLTIGFLAVGLQLILGIV
EEEHHCCCCCCHHHCCCCCCEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IGLSSGYFGGRIDSFLMRFADVQLSFSTLMVAIIVSAIFKASFGNEFYSEYAVIMLVVII
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GIAEWPQYARTIRASVLAEKEKEYVEAAQVMGFKAGRIMFRHILPNCLSPILVISTVQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAIMSEAALSFLGLGLPVDQPSLGALISIGFKYIFSGAWWITLFPGIVLVTLVLVINLLG
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
DWLRDAFNPKIYKG
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]