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The map label for this gene is siaP [H]

Identifier: 119944343

GI number: 119944343

Start: 749993

End: 751009

Strand: Direct

Name: siaP [H]

Synonym: Ping_0570

Alternate gene names: 119944343

Gene position: 749993-751009 (Clockwise)

Preceding gene: 119944337

Following gene: 119944344

Centisome position: 16.45

GC content: 43.26

Gene sequence:

>1017_bases
ATGATTAATTTTAAAAAACATAAACTGATTAATGGCTTACTGGCCTTATCACTGGGGTTCGGTTCTTTGGCATCATCGGC
AATGGCCAATGCTGCTGAGCATAATTGGCGTTTTGCCAATTTGTATGGACGTGGCACTGCTTATGGCACGCTTTACGAAA
ACCTGGGAAAAAATATTGAAACTATGTCTAACGGCCGTATTTCTGTGCAGGTTTTATATTCAGGAGAAGGGGTTAACACC
ACGGGTATCTTGTCGGCCGTTAAAACTGGTTTGATTACTATGGGTGCACCATTTCAATCCATGCATGCGGGAGAATTACC
TGCAGGTATTGTAGAAATCGGCTTGCCGGGCGGTACATCTGACGTGGGCGCATTATCAACACTCTTTCATGAAACACAAT
GGTCGGAAATTTTAGATAAAGCCTATGGTGAACTGGGCATGGTGCGCTTAGAGCCTTATATTCAACCGCCAGTTTATGTG
ATTACTAAAAAAGAAATTACATCTATTGATGACTTTGAAGGCTTAAAAATCCGTGCGCCGGGTGCCTATGGTAAATTTTT
ACGTAATCTTGGTGCATCGCCTGTCTCGCTTGCCTGGAGTGAAATTTACACATCAATGGCGACCGGGGTTATTGATGGTT
CAATCGGCTCAAATATGATTGATCATCGCGATGGTAATCACGTAGAGGTTGCCAAATATATGTATGCTTTACCGCTTGCG
GGTGCACAGGTATTACCTATTGTGGTTAATCAAAAAGCATGGAGTAAACTAACGCCTGATTTACAAGCCATTGTGCGTGG
CGCCAGTGCGATACATGCGCAGGAACAGATGACTAAATCTGTGTTATGGGAATCTCAAGCGGTCGCAGAGATGGAAGCCG
CTGGACTGAAGTGGAGTCCAGAGCCTTCAGCTGCTGATAAAAAAGCATGGAAAGAAGCAGGTATGTCTTTAGCCAAAGAG
TATTCCGAGGAAGATAAATATTCTAAGCAGTTAGTGGATATATTAAACGCACAATAA

Upstream 100 bases:

>100_bases
TAAACCGAAGGGTGAAAATGCTTACAAAGTACTTTTTTCTAACGAATGTTTGTACCAAGCAACTTACATTTAGATAACTC
AACTAAAAGAGAGAATTTAT

Downstream 100 bases:

>100_bases
TTTATAGGAGTACGGGTGAGCCATAGGCTCACCTTTTTTAAGGAGCAAAAATGATTGTCCCAGTATTACAAGGTTATTGT
CGCTTAGTCCGTTATATCGT

Product: TRAP dicarboxylate transporter- DctP subunit

Products: NA

Alternate protein names: Extracytoplasmic solute receptor protein siaP; N-acetylneuraminic-binding protein; Neu5Ac-binding protein [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MINFKKHKLINGLLALSLGFGSLASSAMANAAEHNWRFANLYGRGTAYGTLYENLGKNIETMSNGRISVQVLYSGEGVNT
TGILSAVKTGLITMGAPFQSMHAGELPAGIVEIGLPGGTSDVGALSTLFHETQWSEILDKAYGELGMVRLEPYIQPPVYV
ITKKEITSIDDFEGLKIRAPGAYGKFLRNLGASPVSLAWSEIYTSMATGVIDGSIGSNMIDHRDGNHVEVAKYMYALPLA
GAQVLPIVVNQKAWSKLTPDLQAIVRGASAIHAQEQMTKSVLWESQAVAEMEAAGLKWSPEPSAADKKAWKEAGMSLAKE
YSEEDKYSKQLVDILNAQ

Sequences:

>Translated_338_residues
MINFKKHKLINGLLALSLGFGSLASSAMANAAEHNWRFANLYGRGTAYGTLYENLGKNIETMSNGRISVQVLYSGEGVNT
TGILSAVKTGLITMGAPFQSMHAGELPAGIVEIGLPGGTSDVGALSTLFHETQWSEILDKAYGELGMVRLEPYIQPPVYV
ITKKEITSIDDFEGLKIRAPGAYGKFLRNLGASPVSLAWSEIYTSMATGVIDGSIGSNMIDHRDGNHVEVAKYMYALPLA
GAQVLPIVVNQKAWSKLTPDLQAIVRGASAIHAQEQMTKSVLWESQAVAEMEAAGLKWSPEPSAADKKAWKEAGMSLAKE
YSEEDKYSKQLVDILNAQ
>Mature_338_residues
MINFKKHKLINGLLALSLGFGSLASSAMANAAEHNWRFANLYGRGTAYGTLYENLGKNIETMSNGRISVQVLYSGEGVNT
TGILSAVKTGLITMGAPFQSMHAGELPAGIVEIGLPGGTSDVGALSTLFHETQWSEILDKAYGELGMVRLEPYIQPPVYV
ITKKEITSIDDFEGLKIRAPGAYGKFLRNLGASPVSLAWSEIYTSMATGVIDGSIGSNMIDHRDGNHVEVAKYMYALPLA
GAQVLPIVVNQKAWSKLTPDLQAIVRGASAIHAQEQMTKSVLWESQAVAEMEAAGLKWSPEPSAADKKAWKEAGMSLAKE
YSEEDKYSKQLVDILNAQ

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system siaPT involved in the uptake of sialic acid. This protein specifically binds sialic acid [H]

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36428; Mature: 36428

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINFKKHKLINGLLALSLGFGSLASSAMANAAEHNWRFANLYGRGTAYGTLYENLGKNIE
CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCC
TMSNGRISVQVLYSGEGVNTTGILSAVKTGLITMGAPFQSMHAGELPAGIVEIGLPGGTS
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHEECCCCHHHCCCCCCCCCEEEEECCCCCC
DVGALSTLFHETQWSEILDKAYGELGMVRLEPYIQPPVYVITKKEITSIDDFEGLKIRAP
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCHHCCCCCCCCCEEECC
GAYGKFLRNLGASPVSLAWSEIYTSMATGVIDGSIGSNMIDHRDGNHVEVAKYMYALPLA
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCC
GAQVLPIVVNQKAWSKLTPDLQAIVRGASAIHAQEQMTKSVLWESQAVAEMEAAGLKWSP
CCEEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EPSAADKKAWKEAGMSLAKEYSEEDKYSKQLVDILNAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MINFKKHKLINGLLALSLGFGSLASSAMANAAEHNWRFANLYGRGTAYGTLYENLGKNIE
CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCC
TMSNGRISVQVLYSGEGVNTTGILSAVKTGLITMGAPFQSMHAGELPAGIVEIGLPGGTS
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHEECCCCHHHCCCCCCCCCEEEEECCCCCC
DVGALSTLFHETQWSEILDKAYGELGMVRLEPYIQPPVYVITKKEITSIDDFEGLKIRAP
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCHHCCCCCCCCCEEECC
GAYGKFLRNLGASPVSLAWSEIYTSMATGVIDGSIGSNMIDHRDGNHVEVAKYMYALPLA
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCC
GAQVLPIVVNQKAWSKLTPDLQAIVRGASAIHAQEQMTKSVLWESQAVAEMEAAGLKWSP
CCEEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EPSAADKKAWKEAGMSLAKEYSEEDKYSKQLVDILNAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA